TomoSeq data search

Data search

Results for MligTC455_43205

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43205

96

1.99

Mlig455_047434

Neo: -

Age: -

ATP13A3

Mlig455_047434 {REF} {Length: 5967} {Pfam: E1-E2 ATPase [PF00122.22, score=118.2]; P5-type ATPase cation transporter [PF12409.10, score=86.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=54.0]; Cation transport ATPase (P-type) [PF13246.8, score=22.6]; Cation transporter/ATPase, N-terminus [PF00690.28, score=20.7]} {Human: ENSG00000133657, ATP13A3, ATPase 13A3, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000022533, Atp13a3, ATPase type 13A3, [RH, Score=887, Expect=0.0]} {Dmel: FBgn0052000, CG32000, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00012341, catp-6, Probable cation-transporting ATPase W08D2.5, [RH, Score=814, Expect=0.0]} {Smed: dd_Smed_v6_1640_0_1, dd_Smed_v6_1640_0_1, [RH, Score=1163, Expect=0.0]} {RNA1509_9532} {RNA1310_1049.1, RNA1509_9532} {RNA1509_9532, RNA815_2131.1}

Cumulative graph for MligTC455_43205

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.759	1.702	0.63536	1.00000
RegionR2	0.331	1.702	0.78860	1.00000
RegionR3	-0.222	1.702	0.92260	1.00000
RegionR4	1.12	1.702	0.44134	0.77007
RegionR5	0.728	1.702	0.51550	0.87827
RegionR6	-0.771	1.702	0.98490	1.00000
RegionR7	1.223	1.702	0.47829	1.00000
RegionR8	0.349	1.702	0.81732	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.365	1.702	0.99986	1.00000
RegenerationR2	3.396	1.702	0.00086	0.04222
RegenerationR3	3.989	1.702	0.00132	0.05974
RegenerationR4	1.821	1.702	0.11352	0.51604
RegenerationR5	1.907	1.702	0.04668	0.35016
RegenerationR6	4.448	1.702	0.00049	0.02301
RegenerationBL	2.404	1.702	0.13905	0.44455
RegenerationTP	1.913	1.702	0.24061	0.68665

Genes with expression patterns similar to MligTC455_43205

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43205	96	1.99	Mlig455_047434	Neo: - Age: -	ATP13A3	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_047434 {REF} {Length: 5967} {Pfam: E1-E2 ATPase [PF00122.22, score=118.2]; P5-type ATPase cation transporter [PF12409.10, score=86.6]; haloacid dehalogenase-like hydrolase [PF00702.28, score=54.0]; Cation transport ATPase (P-type) [PF13246.8, score=22.6]; Cation transporter/ATPase, N-terminus [PF00690.28, score=20.7]} {Human: ENSG00000133657, ATP13A3, ATPase 13A3, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000022533, Atp13a3, ATPase type 13A3, [RH, Score=887, Expect=0.0]} {Dmel: FBgn0052000, CG32000, [RH, Score=894, Expect=0.0]} {Celegans: WBGene00012341, catp-6, Probable cation-transporting ATPase W08D2.5, [RH, Score=814, Expect=0.0]} {Smed: dd_Smed_v6_1640_0_1, dd_Smed_v6_1640_0_1, [RH, Score=1163, Expect=0.0]} {RNA1509_9532} {RNA1310_1049.1, RNA1509_9532} {RNA1509_9532, RNA815_2131.1}
2.	MligTC455_50924	80	1.67	Mlig455_025602	Neo: - Age: Up-Up-Down	NELFE	1.689	-	-	-	0.718	-	0.971	Mlig455_025602 {REF} {Length: 1327} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.3]} {Human: ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055}
3.	MligTC455_50180	423	8.82	Mlig455_021231	Neo: - Age: -	TST	1.684	0.725	-	-	-	-	0.959	Mlig455_021231 {REF} {Length: 1226} {TRANSSPLICED} {Pfam: Rhodanese-like domain [PF00581.22, score=82.1]} {Human: ENSG00000128311, TST, thiosulfate sulfurtransferase, [RH, Score=219, Expect=2e-69]; ENSG00000128309, MPST, mercaptopyruvate sulfurtransferase, [RH, Score=211, Expect=3e-66]} {Mouse: ENSMUSG00000044986, Tst, thiosulfate sulfurtransferase, mitochondrial, [RH, Score=210, Expect=4e-66]} {Celegans: WBGene00010383, mpst-3, Sulfurtransferase, [RH, Score=87.8, Expect=1e-19]} {RNA1509_5878} {RNA1310_28461} {RNA815_15541}
4.	MligTC455_35873	265	5.53	Mlig455_042784	Neo: - Age: -	KCTD20	0.96	-	-	-	-	-	0.960	Mlig455_042784 {REF} {Length: 5331} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF16017.7, score=32.5]} {Human: ENSG00000112078, KCTD20, potassium channel tetramerization domain containing 20, [Score=213, Expect=9e-63]} {Mouse: ENSMUSG00000005936, Kctd20, potassium channel tetramerisation domain containing 20, [Score=213, Expect=2e-63]} {Dmel: FBgn0035107, mri, mrityu, [Score=230, Expect=4e-69]} {Celegans: WBGene00019888, btbd-10, BTB/POZ Domain-containing protein homolog, [Score=187, Expect=1e-52]} {Smed: dd_Smed_v6_6116_1_1, dd_Smed_v6_6116_1_1, [Score=221, Expect=2e-64]} {RNA1509_27187} {RNA1310_11918.1} {RNA815_16967}
5.	MligTC455_31085	56	1.17	Mlig455_012955	Neo: - Age: - Region-enriched R4: 4.450/0.01398	ZFAND4	0.959	-	-	-	-	-	0.959	Mlig455_012955 {REF} {Length: 3260} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=53.8]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=25.1]; Ubiquitin-like domain [PF14560.8, score=19.5]} {Human: ENSG00000172671, ZFAND4, zinc finger AN1-type containing 4, [RH, Score=146, Expect=5e-39]} {Mouse: ENSMUSG00000042213, Zfand4, zinc finger, AN1-type domain 4, [RH, Score=150, Expect=2e-40]} {Dmel: FBgn0003941, RpL40, Ribosomal protein L40, [Score=64.3, Expect=1e-12]} {Celegans: WBGene00006728, ubq-2, Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40, [Score=62.0, Expect=7e-12]} {Smed: dd_Smed_v6_4992_0_1, dd_Smed_v6_4992_0_1, [RH, Score=141, Expect=1e-38]} {RNA1509_11475, RNA1509_27952} {RNA1310_28869, RNA1509_27952} {RNA1509_27952, RNA815_6580}
6.	MligTC455_13784	43	0.89	Mlig455_031300	Neo: Int S/G2/M Age: Down-Down-Up	MAP3K19	0.952	-	-	-	-	-	0.952	Mlig455_031300 {REF} {Length: 3878} {Pfam: Protein kinase domain [PF00069.27, score=168.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=144.4]; Ankyrin repeats (3 copies) [PF12796.9, score=112.4]; Ankyrin repeats (many copies) [PF13637.8, score=105.5]; Ankyrin repeat [PF13606.8, score=55.6]; Ankyrin repeats (many copies) [PF13857.8, score=48.6]; Ankyrin repeat [PF00023.32, score=43.4]; ABC1 atypical kinase-like domain [PF03109.18, score=29.7]; Fungal protein kinase [PF17667.3, score=24.2]; Kinase-like [PF14531.8, score=21.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=164, Expect=7e-43]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=156, Expect=3e-40]} {Dmel: FBgn0014006, Ask1, Apoptotic signal-regulating kinase 1, [Score=133, Expect=1e-31]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=112, Expect=3e-26]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=137, Expect=4e-33]} {RNA1509_41875, RNA1509_45057} {RNA1310_5347, RNA1509_45057} {RNA1509_45057, RNA815_6635.1}
7.	MligTC455_25139	408	8.51	Mlig455_020679	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_020679 {REF} {Length: 470} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29096} {RNA1310_21552} {RNA815_28391.1}
8.	MligTC455_42583	148	3.09	Mlig455_006623	Neo: - Age: Up-Down-Down	MOSPD1	0.952	-	-	-	-	-	0.952	Mlig455_006623 {REF} {Length: 2507} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=49.6]} {Human: ENSG00000101928, MOSPD1, motile sperm domain containing 1, [RH, Score=93.6, Expect=1e-22]} {Mouse: ENSMUSG00000023074, Mospd1, motile sperm domain containing 1, [RH, Score=95.5, Expect=2e-23]} {RNA1509_17503} {RNA1310_37601, RNA1509_17503} {RNA1509_17503, RNA815_17755}
9.	MligTC455_44124	604	12.59	Mlig455_019771	Neo: - Age: Down-Up-Up Region-enriched R4: 1.874/0.04350 Region-enriched R5: 1.825/0.01120	TOM1L2	0.951	-	-	-	-	-	0.951	Mlig455_019771 {REF} {Length: 3238} {TRANSSPLICED} {Pfam: VHS domain [PF00790.21, score=129.5]; GAT domain [PF03127.16, score=69.4]} {Human: ENSG00000175662, TOM1L2, target of myb1 like 2 membrane trafficking protein, [RH, Score=348, Expect=6e-114]; ENSG00000100284, TOM1, target of myb1 membrane trafficking protein, [RH, Score=341, Expect=2e-111]} {Mouse: ENSMUSG00000000538, Tom1l2, target of myb1-like 2 (chicken), [RH, Score=356, Expect=2e-117]} {Dmel: FBgn0035995, CG3529, [RH, Score=295, Expect=3e-93]} {Celegans: WBGene00015561, C07A12.7, [RH, Score=276, Expect=3e-87]} {Smed: dd_Smed_v6_2447_0_1, dd_Smed_v6_2447_0_1, [RH, Score=237, Expect=3e-72]} {RNA1509_56665} {RNA1310_5692.2} {RNA815_3784}
10.	MligTC455_31018	820	17.07	Mlig455_056558	Neo: Irradiation Age: logFC(26M/2M)=0.823 Region-specific R4: 1.806	LAMA3	0.95	-	-	-	-	-	0.950	Mlig455_056558 {REF} {Length: 3017} {Human: ENSG00000053747, LAMA3, laminin subunit alpha 3, [Score=50.1, Expect=1e-05]} {Mouse: ENSMUSG00000029502, Golga3, golgi autoantigen, golgin subfamily a, 3, [Score=55.8, Expect=1e-07]} {RNA1509_4848} {RNA1310_1473} {RNA815_781.1}
11.	MligTC455_37383	359	7.48	Mlig455_024630	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_024630 {REF} {Length: 2395} {Pfam: Osteopetrosis-associated transmembrane protein 1 precursor [PF09777.11, score=133.8]} {RNA1509_46891} {RNA1310_17332, RNA1509_46891} {RNA1509_46891, RNA815_13588}

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