TomoSeq data search

Data search

Results for MligTC455_43226

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43226

1854

38.62

Mlig455_038125, Mlig455_039793

Neo: -

Age: -

Mlig455_038125 {REF} {Length: 6097} {TRANSSPLICED} {Smed: dd_Smed_v6_7590_0_1, dd_Smed_v6_7590_0_1, [RH, Score=92.4, Expect=3e-20]} {RNA1509_33064, RNA1509_5008} {RNA1310_2427.1, RNA1509_33064} {RNA1509_33064, RNA815_1854}

Mlig455_039793 {REF} {Length: 6020} {TRANSSPLICED} {Smed: dd_Smed_v6_7590_0_1, dd_Smed_v6_7590_0_1, [RH, Score=92.4, Expect=3e-20]} {RNA1509_47752, RNA1509_5008} {RNA1310_2427.1, RNA1509_47752, RNA1509_5008} {RNA1509_47752, RNA1509_5008, RNA815_1854}

Cumulative graph for MligTC455_43226

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.73	5.434	0.03026	0.44598
RegionR2	-0.461	5.434	0.29055	0.67915
RegionR3	-0.827	5.434	0.02958	0.29479
RegionR4	0.505	5.434	0.25113	0.55068
RegionR5	-0.179	5.434	0.59625	0.95420
RegionR6	-0.527	5.434	0.14912	0.68814
RegionR7	-0.688	5.434	0.13984	0.69958
RegionR8	0.447	5.434	0.38474	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.072	5.434	0.93743	1.00000
RegenerationR2	0.89	5.434	0.02926	0.28145
RegenerationR3	1.045	5.434	0.02034	0.26092
RegenerationR4	0.253	5.434	0.58262	0.90623
RegenerationR5	0.482	5.434	0.25746	0.68935
RegenerationR6	0.976	5.434	0.02692	0.20551
RegenerationBL	0.991	5.434	0.02937	0.19072
RegenerationTP	0.702	5.434	0.15633	0.58410

Genes with expression patterns similar to MligTC455_43226

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43226	1854	38.62	Mlig455_038125, Mlig455_039793	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_038125 {REF} {Length: 6097} {TRANSSPLICED} {Smed: dd_Smed_v6_7590_0_1, dd_Smed_v6_7590_0_1, [RH, Score=92.4, Expect=3e-20]} {RNA1509_33064, RNA1509_5008} {RNA1310_2427.1, RNA1509_33064} {RNA1509_33064, RNA815_1854} Mlig455_039793 {REF} {Length: 6020} {TRANSSPLICED} {Smed: dd_Smed_v6_7590_0_1, dd_Smed_v6_7590_0_1, [RH, Score=92.4, Expect=3e-20]} {RNA1509_47752, RNA1509_5008} {RNA1310_2427.1, RNA1509_47752, RNA1509_5008} {RNA1509_47752, RNA1509_5008, RNA815_1854}
2.	MligTC455_04273	1905	39.69	Mlig455_014980, Mlig455_027959, Mlig455_027986, Mlig455_042890, Mlig455_056217	Neo: - Age: logFC(26M/2M)=0.365 Region-enriched R4: 1.233/0.00679		1.799	-	-	0.951	-	-	0.848	Mlig455_014980 {REF} {Length: 2410} {TRANSSPLICED} {Pfam: Plasmid protein of unknown function (Plasmid_RAQPRD) [PF09686.12, score=24.0]} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1} Mlig455_027959 {REF} {Length: 3263} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382} Mlig455_027986 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382} Mlig455_042890 {REF} {Length: 2273} {RNA1509_7158} {RNA1310_4079} {RNA815_282.1} Mlig455_056217 {REF} {Length: 3151} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=33.3]} {RNA1509_33750} {RNA1310_4079} {RNA815_20382}
3.	MligTC455_47054	843	17.57	Mlig455_028044	Neo: - Age: -	PLEKHB2	1.782	-	-	0.958	-	-	0.824	Mlig455_028044 {REF} {Length: 2405} {Pfam: PH domain [PF00169.31, score=34.8]} {Human: ENSG00000115762, PLEKHB2, pleckstrin homology domain containing B2, [Score=80.5, Expect=1e-17]} {Mouse: ENSMUSG00000026123, Plekhb2, pleckstrin homology domain containing, family B (evectins) member 2, [Score=89.4, Expect=2e-21]} {Smed: dd_Smed_v6_1927_0_1, dd_Smed_v6_1927_0_1, [Score=142, Expect=4e-42]} {RNA1509_14925, RNA1509_15593, RNA1509_22390, RNA1509_25461, RNA1509_32057, RNA1509_52704} {RNA1310_12474, RNA1509_14925, RNA1509_15593, RNA1509_22390, RNA1509_25461, RNA1509_32057, RNA1509_52704} {RNA1509_14925, RNA1509_15593, RNA1509_22390, RNA1509_25461, RNA1509_32057, RNA1509_52704, RNA815_35325}
4.	MligTC455_34171	1083	22.57	Mlig455_037006	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=-0.241	RACK1	1.699	-	-	0.958	-	-	0.741	Mlig455_037006 {REF} {Length: 1275} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=161.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=46.0]; Nucleoporin Nup120/160 [PF11715.10, score=32.7]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=23.1]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.3]; Cytochrome D1 heme domain [PF02239.18, score=18.9]; Protein of unknown function (DUF1513) [PF07433.13, score=18.9]} {Human: ENSG00000204628, RACK1, receptor for activated C kinase 1, [Score=510, Expect=0.0]} {Mouse: ENSMUSG00000020372, Rack1, receptor for activated C kinase 1, [Score=510, Expect=0.0]} {Dmel: FBgn0020618, Rack1, Receptor of activated protein kinase C 1, [RH, Score=461, Expect=1e-164]} {Celegans: WBGene00010556, rack-1, Guanine nucleotide-binding protein subunit beta-2-like 1, [RH, Score=434, Expect=7e-154]} {Smed: dd_Smed_v6_174_0_1, dd_Smed_v6_174_0_1, [RH, Score=485, Expect=2e-174]} {RNA1509_454} {RNA1310_23103.1} {RNA815_9604}
5.	MligTC455_52286	301	6.27	Mlig455_051314	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.320	AGO2	1.657	-	-	0.953	0.704	-	-	Mlig455_051314 {REF} {Length: 4274} {Pfam: Piwi domain [PF02171.19, score=369.3]; Mid domain of argonaute [PF16487.7, score=114.6]; N-terminal domain of argonaute [PF16486.7, score=104.8]; PAZ domain [PF02170.24, score=82.1]; Argonaute linker 1 domain [PF08699.12, score=78.7]; Argonaute linker 2 domain [PF16488.7, score=48.4]} {Human: ENSG00000123908, AGO2, argonaute 2, RISC catalytic component, [RH, Score=1254, Expect=0.0]; ENSG00000092847, AGO1, argonaute 1, RISC catalytic component, [RH, Score=1230, Expect=0.0]; ENSG00000126070, AGO3, argonaute 3, RISC catalytic component, [RH, Score=1222, Expect=0.0]; ENSG00000134698, AGO4, argonaute 4, RISC catalytic component, [RH, Score=1199, Expect=0.0]} {Mouse: ENSMUSG00000036698, Ago2, argonaute RISC catalytic subunit 2, [RH, Score=1258, Expect=0.0]; ENSMUSG00000041530, Ago1, argonaute RISC catalytic subunit 1, [RH, Score=1230, Expect=0.0]; ENSMUSG00000028842, Ago3, argonaute RISC catalytic subunit 3, [RH, Score=1221, Expect=0.0]} {Dmel: FBgn0262739, AGO1, Argonaute-1, [RH, Score=1342, Expect=0.0]} {Celegans: WBGene00000105, alg-1, Argonaute-like, [RH, Score=1260, Expect=0.0]} {Smed: dd_Smed_v6_3861_0_1, dd_Smed_v6_3861_0_1, [RH, Score=1449, Expect=0.0]} {RNA1509_3358} {RNA1310_4477.1, RNA1509_3358} {RNA1509_3358, RNA815_1509.1}
6.	MligTC455_12229	199	4.14	Mlig455_036322	Neo: - Age: -	CAMSAP3	0.967	-	-	0.967	-	-	-	Mlig455_036322 {REF} {Length: 8055} {TRANSSPLICED} {Pfam: Microtubule-binding calmodulin-regulated spectrin-associated [PF08683.13, score=139.5]} {Human: ENSG00000076826, CAMSAP3, calmodulin regulated spectrin associated protein family member 3, [Score=123, Expect=1e-27]; ENSG00000130559, CAMSAP1, calmodulin regulated spectrin associated protein 1, [Score=119, Expect=2e-26]} {Mouse: ENSMUSG00000044433, Camsap3, calmodulin regulated spectrin-associated protein family, member 3, [Score=123, Expect=8e-28]; ENSMUSG00000026933, Camsap1, calmodulin regulated spectrin-associated protein 1, [Score=119, Expect=3e-26]} {Dmel: FBgn0263197, Patronin, [Score=122, Expect=2e-27]} {Celegans: WBGene00004121, ptrn-1, Patronin (microtubule-binding protein) homolog, [Score=125, Expect=1e-30]} {Smed: dd_Smed_v6_7356_0_1, dd_Smed_v6_7356_0_1, [Score=158, Expect=8e-39]} {RNA1509_13577} {RNA1310_1488} {RNA815_13505}
7.	MligTC455_40039	210	4.37	Mlig455_044449	Neo: - Age: Down-Up-Up		0.963	-	-	0.963	-	-	-	Mlig455_044449 {REF} {Length: 1349} {Pfam: Ets-domain [PF00178.24, score=21.9]} {RNA1509_38421} {RNA1310_33082} {RNA815_26283}
8.	MligTC455_53363	477	9.94	Mlig455_042368, Mlig455_069314	Neo: - Age: Down-Down-Up Regeneration-enriched BL: 3.828 Regeneration-enriched R5: 2.279		0.96	-	-	0.960	-	-	-	Mlig455_042368 {REF} {Length: 667} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=50.7]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870} Mlig455_069314 {REF} {Length: 3392} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870}
9.	MligTC455_35174	342	7.13	Mlig455_009545, Mlig455_054086	Neo: - Age: Up-Down-Down	PTPRN2	0.953	-	-	0.953	-	-	-	Mlig455_009545 {REF} {Length: 87} {NoTransDecoderORF} {RNA1509_3577} {RNA1310_173.2} {RNA815_26664} Mlig455_054086 {REF} {Length: 10208} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=222.7]} {Human: ENSG00000155093, PTPRN2, protein tyrosine phosphatase, receptor type N2, [RH, Score=412, Expect=1e-129]} {Mouse: ENSMUSG00000056553, Ptprn2, protein tyrosine phosphatase, receptor type, N polypeptide 2, [RH, Score=407, Expect=7e-128]} {Dmel: FBgn0031294, IA-2, IA-2 protein tyrosine phosphatase, [RH, Score=376, Expect=8e-114]} {Celegans: WBGene00002048, ida-1, IA2; IDA-1 protein; Related to Islet cell Diabetes Autoantigen, [Score=280, Expect=1e-82]} {Smed: dd_Smed_v6_6990_0_1, dd_Smed_v6_6990_0_1, [RH, Score=391, Expect=8e-125]} {RNA1509_34721, RNA1509_41198} {RNA1310_3634, RNA1509_34721, RNA1509_41198} {RNA1509_34721, RNA1509_41198, RNA815_1727.1}
10.	MligTC455_19767	316	6.58	Mlig455_066462	Neo: - Age: -	MFN2	0.951	-	-	0.951	-	-	-	Mlig455_066462 {REF} {Length: 3855} {TRANSSPLICED} {Pfam: fzo-like conserved region [PF04799.15, score=166.1]; Dynamin family [PF00350.25, score=91.3]; 50S ribosome-binding GTPase [PF01926.25, score=33.2]} {Human: ENSG00000116688, MFN2, mitofusin 2, [RH, Score=569, Expect=0.0]; ENSG00000171109, MFN1, mitofusin 1, [RH, Score=543, Expect=0.0]} {Mouse: ENSMUSG00000029020, Mfn2, mitofusin 2, [RH, Score=576, Expect=0.0]; ENSMUSG00000027668, Mfn1, mitofusin 1, [RH, Score=558, Expect=0.0]} {Dmel: FBgn0029870, Marf, Mitochondrial assembly regulatory factor, [RH, Score=581, Expect=0.0]} {Celegans: WBGene00001509, fzo-1, Transmembrane GTPase fzo-1, [RH, Score=405, Expect=9e-130]} {Smed: dd_Smed_v6_2168_0_1, dd_Smed_v6_2168_0_1, [RH, Score=576, Expect=0.0]} {RNA1509_18473, RNA1509_33024, RNA1509_6996} {RNA1310_1685.1, RNA1509_18473, RNA1509_33024, RNA1509_6996} {RNA1509_18473, RNA1509_33024, RNA1509_6996, RNA815_384.2}

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