Data search


search
Exact
Search

Results for MligTC455_43248

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43248 157 3.26 Mlig455_023547

Neo: -

Age: -

ZRANB1 Mlig455_023547 {REF} {Length: 4492} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=61.6]; Zn-finger in Ran binding protein and others [PF00641.20, score=25.2]} {Human: ENSG00000019995, ZRANB1, zinc finger RANBP2-type containing 1, [Score=338, Expect=2e-104]} {Mouse: ENSMUSG00000030967, Zranb1, zinc finger, RAN-binding domain containing 1, [Score=340, Expect=5e-105]} {Dmel: FBgn0037734, trbd, trabid, [Score=307, Expect=2e-92]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [Score=117, Expect=3e-27]} {Smed: dd_Smed_v6_2288_0_1, dd_Smed_v6_2288_0_1, [Score=353, Expect=1e-109]} {RNA1509_7383} {RNA1310_7018} {RNA815_4305}

Cumulative graph for MligTC455_43248

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -6.087 2.352 0.14802 0.76159
RegionR2 1.674 2.352 0.09084 0.36972
RegionR3 0.828 2.352 0.37901 0.91176
RegionR4 0.252 2.352 0.75211 1.00000
RegionR5 0.797 2.352 0.36581 0.71833
RegionR6 0.719 2.352 0.46472 1.00000
RegionR7 0.272 2.352 0.76669 1.00000
RegionR8 1.546 2.352 0.20673 0.80834

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 6.036 2.352 0.24030 0.96582
RegenerationR2 0.222 2.352 0.66878 0.94470
RegenerationR3 0.316 2.352 0.62126 0.91710
RegenerationR4 0.22 2.352 0.72583 0.96333
RegenerationR5 -0.637 2.352 0.27854 0.70774
RegenerationR6 0.155 2.352 0.82438 0.98867
RegenerationBL 0.426 2.352 0.61839 0.96156
RegenerationTP -2.163 2.352 0.10996 0.51059


Genes with expression patterns similar to MligTC455_43248

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43248 157 3.26 Mlig455_023547

Neo: -

Age: -

ZRANB1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_023547 {REF} {Length: 4492} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=61.6]; Zn-finger in Ran binding protein and others [PF00641.20, score=25.2]} {Human: ENSG00000019995, ZRANB1, zinc finger RANBP2-type containing 1, [Score=338, Expect=2e-104]} {Mouse: ENSMUSG00000030967, Zranb1, zinc finger, RAN-binding domain containing 1, [Score=340, Expect=5e-105]} {Dmel: FBgn0037734, trbd, trabid, [Score=307, Expect=2e-92]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [Score=117, Expect=3e-27]} {Smed: dd_Smed_v6_2288_0_1, dd_Smed_v6_2288_0_1, [Score=353, Expect=1e-109]} {RNA1509_7383} {RNA1310_7018} {RNA815_4305}
2. MligTC455_33342 548 11.41 Mlig455_001683

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.324

ITPR2 1.671 - - 0.704 - 0.967 - Mlig455_001683 {REF} {Length: 9856} {Pfam: RIH domain [PF01365.23, score=103.5]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=74.4]; RyR and IP3R Homology associated [PF08454.13, score=66.6]; MIR domain [PF02815.21, score=58.3]; Ion transport protein [PF00520.33, score=26.8]} {Human: ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=211, Expect=8e-54]; ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=207, Expect=2e-52]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=204, Expect=1e-51]} {Mouse: ENSMUSG00000030287, Itpr2, inositol 1,4,5-triphosphate receptor 2, [Score=218, Expect=6e-56]; ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=212, Expect=3e-54]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=186, Expect=3e-46]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=164, Expect=5e-40]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1676, Expect=0.0]} {RNA1509_13093} {RNA1310_939} {RNA815_220}
3. MligTC455_48103 628 13.08 Mlig455_057218

Neo: -

Age: Up-Up-Down

RGS22 1.653 - - - 0.703 0.950 - Mlig455_057218 {REF} {Length: 3461} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=26.0]} {Human: ENSG00000132554, RGS22, regulator of G protein signaling 22, [RH, Score=72.4, Expect=3e-12]} {Mouse: ENSMUSG00000037627, Rgs22, regulator of G-protein signalling 22, [RH, Score=56.6, Expect=1e-07]} {Smed: dd_Smed_v6_11778_0_1, dd_Smed_v6_11778_0_1, [Score=246, Expect=4e-68]} {RNA1509_2536} {RNA1310_3477} {RNA815_616.1}
4. MligTC455_19602 1304 27.17 Mlig455_001419

Neo: -

Age: logFC(26M/2M)=-0.387

0.975 - - - - 0.975 - Mlig455_001419 {REF} {Length: 2919} {RNA1509_31922, RNA1509_3389} {RNA1310_10529.1, RNA1509_31922, RNA1509_3389} {RNA1509_31922, RNA1509_3389, RNA815_4554}
5. MligTC455_37720 156 3.25 Mlig455_027725, Mlig455_027921, Mlig455_027931

Neo: -

Age: Up-Down-Down

Region-enriched R2: 4.630/0.03113

TRPV6 0.961 - - - - 0.961 -

Mlig455_027725 {REF} {Length: 5690} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.7]; Ion transport protein [PF00520.33, score=39.6]; Ankyrin repeat [PF13606.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=30.8]; Ankyrin repeat [PF00023.32, score=29.7]; Polycystin cation channel [PF08016.14, score=27.5]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]} {Human: ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=207, Expect=4e-55]; ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=206, Expect=4e-55]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=206, Expect=1e-54]} {Dmel: FBgn0086693, iav, inactive, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [RH, Score=489, Expect=8e-156]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=492, Expect=6e-158]} {RNA1509_36869} {RNA1310_5278, RNA1509_36869} {RNA1509_36869, RNA815_5723}

Mlig455_027921 {REF} {Length: 8298} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.7]; Ion transport protein [PF00520.33, score=39.2]; Ankyrin repeat [PF13606.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=30.8]; Ankyrin repeat [PF00023.32, score=29.8]; Polycystin cation channel [PF08016.14, score=27.1]; Ankyrin repeats (many copies) [PF13637.8, score=21.3]} {Human: ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=207, Expect=4e-55]; ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=206, Expect=5e-55]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=206, Expect=9e-55]} {Dmel: FBgn0086693, iav, inactive, [RH, Score=566, Expect=0.0]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [RH, Score=488, Expect=1e-155]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=491, Expect=1e-157]} {RNA1509_36869} {RNA1310_5278} {RNA815_5723}

Mlig455_027931 {REF} {Length: 6147} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=53.7]; Ion transport protein [PF00520.33, score=40.0]; Ankyrin repeat [PF13606.8, score=34.3]; Ankyrin repeats (many copies) [PF13857.8, score=31.5]; Ankyrin repeat [PF00023.32, score=30.2]; Polycystin cation channel [PF08016.14, score=27.8]; Ankyrin repeats (many copies) [PF13637.8, score=21.7]} {Human: ENSG00000276971, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=208, Expect=7e-56]; ENSG00000165125, TRPV6, transient receptor potential cation channel subfamily V member 6, [RH, Score=207, Expect=1e-55]} {Mouse: ENSMUSG00000029868, Trpv6, transient receptor potential cation channel, subfamily V, member 6, [Score=206, Expect=3e-55]} {Dmel: FBgn0086693, iav, inactive, [RH, Score=567, Expect=0.0]} {Celegans: WBGene00003889, osm-9, Olfactory channel, [RH, Score=488, Expect=5e-157]} {Smed: dd_Smed_v6_28914_0_1, dd_Smed_v6_28914_0_1, [Score=490, Expect=4e-159]} {RNA1509_36869} {RNA1310_5278} {RNA815_5723}
6. MligTC455_50764 284 5.92 Mlig455_049612

Neo: -

Age: -

PAQR6 0.956 - - - - 0.956 - Mlig455_049612 {REF} {Length: 2285} {TRANSSPLICED} {Pfam: Haemolysin-III related [PF03006.22, score=137.4]} {Human: ENSG00000160781, PAQR6, progestin and adipoQ receptor family member 6, [RH, Score=169, Expect=1e-49]; ENSG00000137819, PAQR5, progestin and adipoQ receptor family member 5, [RH, Score=167, Expect=7e-49]} {Mouse: ENSMUSG00000032278, Paqr5, progestin and adipoQ receptor family member V, [RH, Score=171, Expect=3e-50]; ENSMUSG00000041423, Paqr6, progestin and adipoQ receptor family member VI, [RH, Score=166, Expect=3e-48]} {Dmel: FBgn0038256, CG7530, [Score=65.5, Expect=1e-11]} {Celegans: WBGene00019643, K11C4.2, [RH, Score=97.1, Expect=5e-23]} {Smed: dd_Smed_v6_14141_0_1, dd_Smed_v6_14141_0_1, [RH, Score=187, Expect=1e-56]} {RNA1509_43309} {RNA1310_31297} {RNA815_20550}
7. MligTC455_29421 40436 842.42 Mlig455_058829

Neo: -

Age: -

Regeneration-depleted BL: -1.565
Regeneration-depleted TP: -1.298

UCP2 0.955 - - - - 0.955 - Mlig455_058829 {REF} {Length: 2039} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=215.2]} {Human: ENSG00000175567, UCP2, uncoupling protein 2, [RH, Score=266, Expect=7e-88]; ENSG00000175564, UCP3, uncoupling protein 3, [RH, Score=253, Expect=8e-83]} {Mouse: ENSMUSG00000033685, Ucp2, uncoupling protein 2 (mitochondrial, proton carrier), [RH, Score=268, Expect=1e-88]} {Dmel: FBgn0030872, Ucp4A, [Score=166, Expect=9e-49]} {Celegans: WBGene00006729, ucp-4, UnCoupling Protein (Mitochondrial substrate carrier), [Score=144, Expect=8e-41]} {Smed: dd_Smed_v6_13134_0_1, dd_Smed_v6_13134_0_1, [Score=138, Expect=1e-38]} {RNA1509_1141, RNA1509_1803, RNA1509_2370, RNA1509_30742, RNA1509_4121, RNA1509_42516, RNA1509_4968, RNA1509_5213, RNA1509_5580, RNA1509_9482, RNA1509_99} {RNA1310_18397, RNA1509_1141, RNA1509_1803, RNA1509_2370, RNA1509_30742, RNA1509_4121, RNA1509_42516, RNA1509_4968, RNA1509_5213, RNA1509_5580, RNA1509_9482, RNA1509_99} {RNA1509_1141, RNA1509_1803, RNA1509_2370, RNA1509_30742, RNA1509_4121, RNA1509_42516, RNA1509_4968, RNA1509_5213, RNA1509_5580, RNA1509_9482, RNA1509_99, RNA815_6832.1}
8. MligTC455_18965 472 9.83 Mlig455_010589

Neo: -

Age: Down-Up-Down

STK38 0.953 - - - - 0.953 - Mlig455_010589 {REF} {Length: 2418} {Pfam: Protein kinase domain [PF00069.27, score=201.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.6]; ABC1 atypical kinase-like domain [PF03109.18, score=32.8]; Protein kinase C terminal domain [PF00433.26, score=19.8]} {Human: ENSG00000112079, STK38, serine/threonine kinase 38, [Score=614, Expect=0.0]; ENSG00000211455, STK38L, serine/threonine kinase 38 like, [Score=607, Expect=0.0]} {Mouse: ENSMUSG00000024006, Stk38, serine/threonine kinase 38, [RH, Score=615, Expect=0.0]} {Dmel: FBgn0003744, trc, tricornered, [RH, Score=607, Expect=0.0]} {Celegans: WBGene00004727, sax-1, Serine/threonine-protein kinase sax-1, [RH, Score=562, Expect=0.0]} {Smed: dd_Smed_v6_6462_0_3, dd_Smed_v6_6462_0_3, [RH, Score=595, Expect=0.0]} {RNA1509_22842} {RNA1310_12343} {RNA815_4455}
9. MligTC455_29085 34 0.72 Mlig455_047082

Neo: -

Age: -

RASGRF2 0.953 - - - - 0.953 - Mlig455_047082 {REF} {Length: 6322} {Pfam: RasGEF domain [PF00617.21, score=194.4]; RhoGEF domain [PF00621.22, score=120.6]; RasGEF N-terminal motif [PF00618.22, score=68.8]; PH domain [PF00169.31, score=20.4]} {Human: ENSG00000113319, RASGRF2, Ras protein specific guanine nucleotide releasing factor 2, [Score=570, Expect=0.0]; ENSG00000058335, RASGRF1, Ras protein specific guanine nucleotide releasing factor 1, [Score=566, Expect=3e-178]} {Mouse: ENSMUSG00000032356, Rasgrf1, RAS protein-specific guanine nucleotide-releasing factor 1, [Score=565, Expect=5e-178]} {Dmel: FBgn0001965, Sos, Son of sevenless, [Score=167, Expect=4e-41]} {Celegans: WBGene00004947, sos-1, Son of sevenless homolog, [Score=119, Expect=1e-26]} {Smed: dd_Smed_v6_18313_0_2, dd_Smed_v6_18313_0_2, [Score=815, Expect=0.0]} {RNA1509_15697, RNA1509_53969} {RNA1310_2543.1, RNA1509_53969} {RNA1509_53969, RNA815_8228.1}
10. MligTC455_36378 34 0.71 Mlig455_046249

Neo: -

Age: -

Region-enriched R5: 3.006/0.04602

NWD2 0.951 - - - - 0.951 - Mlig455_046249 {REF} {Length: 5234} {Pfam: AAA ATPase domain [PF13191.8, score=37.9]; NACHT domain [PF05729.14, score=28.9]; WD domain, G-beta repeat [PF00400.34, score=27.1]} {Human: ENSG00000174145, NWD2, NACHT and WD repeat domain containing 2, [Score=363, Expect=1e-101]} {Mouse: ENSMUSG00000090061, Nwd2, NACHT and WD repeat domain containing 2, [Score=355, Expect=2e-99]} {Dmel: FBgn0038397, CG10185, [Score=827, Expect=0.0]} {Celegans: WBGene00020254, T05C3.2, [Score=827, Expect=0.0]} {Smed: dd_Smed_v6_11085_0_2, dd_Smed_v6_11085_0_2, [Score=336, Expect=2e-93]} {RNA1310_71275}
11. MligTC455_29012 227 4.74 Mlig455_004572

Neo: -

Age: Down-Down-Up

TMEM30A 0.95 - - - - 0.950 - Mlig455_004572 {REF} {Length: 3160} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=265.5]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [RH, Score=234, Expect=7e-73]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [RH, Score=241, Expect=7e-76]} {Dmel: FBgn0030752, CG9947, [RH, Score=294, Expect=9e-97]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=246, Expect=3e-78]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=275, Expect=2e-89]} {RNA1509_38539} {RNA1310_9371} {RNA815_12157}
12. MligTC455_40228 146 3.03 Mlig455_010654, Mlig455_010753

Neo: -

Age: logFC(26M/2M)=0.372

Region-enriched R2: 5.064/0.02014

KY 0.95 - - - - 0.950 -

Mlig455_010654 {REF} {Length: 3057} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=103, Expect=6e-22]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=113, Expect=2e-25]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=373, Expect=6e-115]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [RH, Score=347, Expect=3e-106]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [Score=207, Expect=1e-55]} {RNA1509_35609} {RNA1310_6947.1} {RNA815_20684}

Mlig455_010753 {REF} {Length: 3328} {Pfam: LIM domain [PF00412.24, score=33.6]} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=104, Expect=3e-22]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=114, Expect=2e-25]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=376, Expect=1e-115]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [RH, Score=353, Expect=4e-108]} {Smed: dd_Smed_v6_1846_0_1, dd_Smed_v6_1846_0_1, [Score=207, Expect=2e-55]} {RNA1509_35609} {RNA1310_6947.1, RNA1509_35609} {RNA1509_35609, RNA815_20684}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA