TomoSeq data search

Data search

Results for MligTC455_43255

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43255

241

5.02

Mlig455_007963, Mlig455_008107

Neo: -

Age: -

TPST1

Mlig455_007963 {REF} {Length: 360} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF13469.8, score=37.3]} {Human: ENSG00000169902, TPST1, tyrosylprotein sulfotransferase 1, [Score=59.3, Expect=6e-11]} {Mouse: ENSMUSG00000034118, Tpst1, protein-tyrosine sulfotransferase 1, [Score=59.3, Expect=4e-11]} {Dmel: FBgn0086674, Tango13, Transport and Golgi organization 13, [Score=62.4, Expect=2e-12]} {Celegans: WBGene00013737, tpst-1, Protein-tyrosine sulfotransferase A, [Score=62.0, Expect=2e-12]} {Smed: dd_Smed_v6_14139_0_1, dd_Smed_v6_14139_0_1, [Score=53.1, Expect=2e-09]} {RNA1509_15897} {RNA1310_18283} {RNA815_5389}

Mlig455_008107 {REF} {Length: 1635} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF13469.8, score=138.0]; Sulfotransferase domain [PF00685.29, score=36.4]} {Human: ENSG00000169902, TPST1, tyrosylprotein sulfotransferase 1, [RH, Score=266, Expect=2e-86]; ENSG00000128294, TPST2, tyrosylprotein sulfotransferase 2, [RH, Score=255, Expect=6e-82]} {Mouse: ENSMUSG00000034118, Tpst1, protein-tyrosine sulfotransferase 1, [RH, Score=266, Expect=1e-86]; ENSMUSG00000029344, Tpst2, protein-tyrosine sulfotransferase 2, [RH, Score=254, Expect=1e-81]} {Dmel: FBgn0086674, Tango13, Transport and Golgi organization 13, [RH, Score=261, Expect=3e-83]} {Celegans: WBGene00013737, tpst-1, Protein-tyrosine sulfotransferase A, [RH, Score=268, Expect=2e-87]} {Smed: dd_Smed_v6_14139_0_1, dd_Smed_v6_14139_0_1, [RH, Score=245, Expect=2e-79]} {RNA1509_15897, RNA1509_41977} {RNA1310_18283, RNA1509_41977} {RNA1509_41977, RNA815_5389}

Cumulative graph for MligTC455_43255

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.262	2.94	0.23292	0.87520
RegionR2	1.789	2.94	0.01109	0.10727
RegionR3	0.259	2.94	0.69044	1.00000
RegionR4	0.973	2.94	0.09588	0.29879
RegionR5	-0.454	2.94	0.48161	0.84533
RegionR6	0.365	2.94	0.57349	1.00000
RegionR7	0.019	2.94	0.97881	1.00000
RegionR8	-0.689	2.94	0.56609	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-4.459	2.94	0.47624	1.00000
RegenerationR2	0.018	2.94	0.97544	1.00000
RegenerationR3	-0.073	2.94	0.91240	1.00000
RegenerationR4	-1.072	2.94	0.07188	0.42598
RegenerationR5	0.478	2.94	0.41832	0.81013
RegenerationR6	0.252	2.94	0.69172	0.91988
RegenerationBL	-0.586	2.94	0.54169	0.90003
RegenerationTP	1.089	2.94	0.21624	0.65926

Genes with expression patterns similar to MligTC455_43255

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43255	241	5.02	Mlig455_007963, Mlig455_008107	Neo: - Age: -	TPST1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007963 {REF} {Length: 360} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF13469.8, score=37.3]} {Human: ENSG00000169902, TPST1, tyrosylprotein sulfotransferase 1, [Score=59.3, Expect=6e-11]} {Mouse: ENSMUSG00000034118, Tpst1, protein-tyrosine sulfotransferase 1, [Score=59.3, Expect=4e-11]} {Dmel: FBgn0086674, Tango13, Transport and Golgi organization 13, [Score=62.4, Expect=2e-12]} {Celegans: WBGene00013737, tpst-1, Protein-tyrosine sulfotransferase A, [Score=62.0, Expect=2e-12]} {Smed: dd_Smed_v6_14139_0_1, dd_Smed_v6_14139_0_1, [Score=53.1, Expect=2e-09]} {RNA1509_15897} {RNA1310_18283} {RNA815_5389} Mlig455_008107 {REF} {Length: 1635} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF13469.8, score=138.0]; Sulfotransferase domain [PF00685.29, score=36.4]} {Human: ENSG00000169902, TPST1, tyrosylprotein sulfotransferase 1, [RH, Score=266, Expect=2e-86]; ENSG00000128294, TPST2, tyrosylprotein sulfotransferase 2, [RH, Score=255, Expect=6e-82]} {Mouse: ENSMUSG00000034118, Tpst1, protein-tyrosine sulfotransferase 1, [RH, Score=266, Expect=1e-86]; ENSMUSG00000029344, Tpst2, protein-tyrosine sulfotransferase 2, [RH, Score=254, Expect=1e-81]} {Dmel: FBgn0086674, Tango13, Transport and Golgi organization 13, [RH, Score=261, Expect=3e-83]} {Celegans: WBGene00013737, tpst-1, Protein-tyrosine sulfotransferase A, [RH, Score=268, Expect=2e-87]} {Smed: dd_Smed_v6_14139_0_1, dd_Smed_v6_14139_0_1, [RH, Score=245, Expect=2e-79]} {RNA1509_15897, RNA1509_41977} {RNA1310_18283, RNA1509_41977} {RNA1509_41977, RNA815_5389}
2.	MligTC455_43254	242	5.04	Mlig455_007962	Neo: - Age: Up-Down-Down	TPST1	5.945	0.967	0.992	1.000	0.999	0.999	0.988	Mlig455_007962 {REF} {Length: 1167} {Pfam: Sulfotransferase family [PF13469.8, score=36.4]; Sulfotransferase domain [PF00685.29, score=20.8]} {Human: ENSG00000169902, TPST1, tyrosylprotein sulfotransferase 1, [Score=87.0, Expect=7e-20]; ENSG00000128294, TPST2, tyrosylprotein sulfotransferase 2, [Score=85.9, Expect=2e-19]} {Mouse: ENSMUSG00000034118, Tpst1, protein-tyrosine sulfotransferase 1, [Score=87.0, Expect=5e-20]; ENSMUSG00000029344, Tpst2, protein-tyrosine sulfotransferase 2, [Score=86.3, Expect=1e-19]} {Dmel: FBgn0086674, Tango13, Transport and Golgi organization 13, [Score=87.0, Expect=4e-20]} {Celegans: WBGene00013737, tpst-1, Protein-tyrosine sulfotransferase A, [Score=97.8, Expect=4e-24]} {Smed: dd_Smed_v6_14139_0_1, dd_Smed_v6_14139_0_1, [Score=106, Expect=7e-28]} {RNA1509_15897} {RNA1310_18283} {RNA815_5389}
3.	MligTC455_52200	3091	64.4	Mlig455_031327	Neo: - Age: Down-Up-Up Regeneration-downregulated BL: -1.624 Regeneration-depleted BL: -1.624		1.689	-	-	-	0.964	0.725	-	Mlig455_031327 {REF} {Length: 1734} {Pfam: Innexin [PF00876.20, score=210.3]} {Celegans: WBGene00002127, inx-5, Innexin-5, [Score=134, Expect=1e-34]} {Smed: dd_Smed_v6_734_0_1, dd_Smed_v6_734_0_1, [Score=139, Expect=2e-36]} {RNA1509_2324} {RNA1310_13247, RNA1509_2324} {RNA1509_2324, RNA815_6165.1}
4.	MligTC455_13738	250	5.21	Mlig455_048156	Neo: - Age: logFC(26M/2M)=3.366 Regeneration-upregulated R2: 3.348 Regeneration-enriched R2: 3.348		1.652	-	-	-	0.950	0.702	-	Mlig455_048156 {REF} {Length: 832} {RNA1310_88526} {RNA815_59579}
5.	MligTC455_33266	107	2.23	Mlig455_033508	Neo: - Age: Up-Up-Down		0.97	-	-	-	-	-	0.970	Mlig455_033508 {REF} {Length: 1125} {NoTransDecoderORF} {RNA1310_76598} {RNA815_40930}
6.	MligTC455_44395	179	3.73	Mlig455_054597, Mlig455_067604	Neo: - Age: Up-Down-Down	SLC8A1	0.961	-	-	-	0.961	-	-	Mlig455_054597 {REF} {Length: 3516} {TRANSSPLICED} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=162.7]; Calx-beta domain [PF03160.16, score=142.8]; C-terminal extension of sodium/calcium exchanger domain [PF16494.7, score=23.2]; Domain of unknown function (DUF4843) [PF16132.7, score=18.7]} {Human: ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [Score=518, Expect=1e-170]; ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [Score=497, Expect=9e-163]} {Mouse: ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=513, Expect=1e-168]; ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=501, Expect=1e-164]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=510, Expect=7e-168]} {Celegans: WBGene00003568, ncx-3, Na/Ca eXchangers, [Score=532, Expect=7e-178]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=492, Expect=2e-161]} {RNA1509_42629} {RNA1310_4660} {RNA815_14049} Mlig455_067604 {REF} {Length: 2698} {Pfam: Calx-beta domain [PF03160.16, score=145.3]; Sodium/calcium exchanger protein [PF01699.26, score=82.2]; C-terminal extension of sodium/calcium exchanger domain [PF16494.7, score=22.7]; Domain of unknown function (DUF4843) [PF16132.7, score=19.8]} {Human: ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [Score=337, Expect=5e-104]; ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [Score=327, Expect=2e-100]} {Mouse: ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=330, Expect=7e-102]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=328, Expect=8e-101]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=338, Expect=1e-104]} {Celegans: WBGene00003568, ncx-3, Na/Ca eXchangers, [Score=346, Expect=6e-109]} {Smed: dd_Smed_v6_7229_0_1, dd_Smed_v6_7229_0_1, [Score=321, Expect=2e-99]} {RNA1509_42629} {RNA1310_4546.1} {RNA815_14049}
7.	MligTC455_23159	230	4.8	Mlig455_062729	Neo: - Age: logFC(26M/2M)=0.274		0.96	-	-	-	-	-	0.960	Mlig455_062729 {REF} {Length: 1969} {Pfam: KH domain [PF00013.31, score=28.7]; Eukaryotic translation initiation factor 2 alpha subunit [PF07541.14, score=24.1]} {RNA1509_17687} {RNA1310_16752.1, RNA1509_17687} {RNA1509_17687, RNA815_8001}
8.	MligTC455_51375	617	12.85	Mlig455_020906	Neo: - Age: - Region-enriched R5: 1.060/0.01134	AP2M1	0.957	-	-	-	0.957	-	-	Mlig455_020906 {REF} {Length: 3249} {TRANSSPLICED} {Pfam: Adaptor complexes medium subunit family [PF00928.23, score=271.5]; Clathrin adaptor complex small chain [PF01217.22, score=28.5]} {Human: ENSG00000161203, AP2M1, adaptor related protein complex 2 subunit mu 1, [RH, Score=763, Expect=0.0]} {Mouse: ENSMUSG00000022841, Ap2m1, adaptor-related protein complex 2, mu 1 subunit, [RH, Score=763, Expect=0.0]} {Dmel: FBgn0263351, AP-2mu, Adaptor Protein complex 2, mu subunit, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00001082, dpy-23, AP-2 complex subunit mu, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_1271_0_1, dd_Smed_v6_1271_0_1, [RH, Score=751, Expect=0.0]} {RNA1509_4361} {RNA1310_5239.1, RNA1509_4361} {RNA1509_4361, RNA815_4059}
9.	MligTC455_50744	795	16.56	Mlig455_001649, Mlig455_001716	Neo: - Age: logFC(26M/2M)=-0.294 Region-enriched R2: 1.407/0.04720 Regeneration-downregulated BL: -3.166 Regeneration-depleted BL: -3.166	LRRK2, MFHAS1	0.954	-	-	-	0.954	-	-	Mlig455_001649 {REF} {Length: 4143} {Pfam: Leucine rich repeat [PF13855.8, score=79.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=49.9]; Ras family [PF00071.24, score=49.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.6]; C-terminal of Roc, COR, domain [PF16095.7, score=38.0]; Leucine Rich Repeat [PF00560.35, score=29.7]; ABC transporter [PF00005.29, score=19.9]} {Human: ENSG00000147324, MFHAS1, malignant fibrous histiocytoma amplified sequence 1, [Score=122, Expect=2e-27]; ENSG00000285022, AC270282.1, malignant fibrous histiocytoma amplified sequence 1, [Score=122, Expect=2e-27]} {Mouse: ENSMUSG00000070056, Mfhas1, malignant fibrous histiocytoma amplified sequence 1, [Score=109, Expect=7e-24]} {Dmel: FBgn0038504, Sur-8, [Score=71.6, Expect=2e-12]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=75.5, Expect=2e-13]} {Smed: dd_Smed_v6_14500_0_1, dd_Smed_v6_14500_0_1, [RH, Score=376, Expect=1e-113]} {RNA1509_6354} {RNA1310_2733, RNA1509_6354} {RNA1509_6354, RNA815_800} Mlig455_001716 {REF} {Length: 3568} {Pfam: Leucine rich repeat [PF13855.8, score=75.4]; Ras family [PF00071.24, score=48.8]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=47.7]; Leucine Rich repeats (2 copies) [PF12799.9, score=47.1]; C-terminal of Roc, COR, domain [PF16095.7, score=38.1]; Leucine Rich Repeat [PF00560.35, score=29.2]; ABC transporter [PF00005.29, score=19.8]} {Human: ENSG00000188906, LRRK2, leucine rich repeat kinase 2, [Score=85.5, Expect=4e-16]} {Mouse: ENSMUSG00000036273, Lrrk2, leucine-rich repeat kinase 2, [Score=85.5, Expect=3e-16]; ENSMUSG00000073375, Lrrc30, leucine rich repeat containing 30, [Score=82.4, Expect=1e-16]} {Dmel: FBgn0038504, Sur-8, [Score=63.5, Expect=8e-10]} {Celegans: WBGene00016974, lron-15, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=72.4, Expect=1e-12]} {Smed: dd_Smed_v6_14500_0_1, dd_Smed_v6_14500_0_1, [Score=283, Expect=8e-81]} {RNA1509_6354} {RNA1310_2733} {RNA815_800}
10.	MligTC455_26548	496	10.34	Mlig455_030843	Neo: - Age: -	CSPP1	0.95	-	-	-	0.950	-	-	Mlig455_030843 {REF} {Length: 3952} {TRANSSPLICED} {Human: ENSG00000104218, CSPP1, centrosome and spindle pole associated protein 1, [Score=82.8, Expect=2e-15]} {Mouse: ENSMUSG00000056763, Cspp1, centrosome and spindle pole associated protein 1, [Score=100, Expect=7e-21]} {Smed: dd_Smed_v6_13453_0_1, dd_Smed_v6_13453_0_1, [Score=88.2, Expect=2e-17]} {RNA1509_48315, RNA1509_7480} {RNA1310_2740.1, RNA1509_48315, RNA1509_7480} {RNA1509_48315, RNA1509_7480, RNA815_13668}

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