Data search
Results for MligTC455_43262
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43262 | 6461 | 134.61 | Mlig455_011242 | Neo: - Age: logFC(26M/2M)=-0.227 |
ARPC3 | Mlig455_011242 {REF} {Length: 1024} {TRANSSPLICED} {Pfam: ARP2/3 complex ARPC3 (21 kDa) subunit [PF04062.16, score=254.3]} {Human: ENSG00000111229, ARPC3, actin related protein 2/3 complex subunit 3, [RH, Score=238, Expect=1e-80]} {Mouse: ENSMUSG00000029465, Arpc3, actin related protein 2/3 complex, subunit 3, [RH, Score=236, Expect=4e-80]} {Dmel: FBgn0038369, Arpc3A, Actin-related protein 2/3 complex, subunit 3A, [RH, Score=225, Expect=8e-76]} {Celegans: WBGene00000203, arx-5, Probable actin-related protein 2/3 complex subunit 3, [RH, Score=171, Expect=2e-54]} {Smed: dd_Smed_v6_4649_0_1, dd_Smed_v6_4649_0_1, [RH, Score=232, Expect=9e-79]} {RNA1509_45670, RNA1509_53736} {RNA1310_7583.2, RNA1509_45670} {RNA1509_45670, RNA815_3441} |
Cumulative graph for MligTC455_43262
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.752 | 7.137 | 0.07623 | 0.60841 | |
| RegionR2 | -0.502 | 7.137 | 0.05495 | 0.28088 | |
| RegionR3 | 0.011 | 7.137 | 0.96078 | 1.00000 | |
| RegionR4 | 0.514 | 7.137 | 0.03505 | 0.15161 | |
| RegionR5 | 0.543 | 7.137 | 0.00911 | 0.05392 | |
| RegionR6 | 0.59 | 7.137 | 0.00632 | 0.12690 | |
| RegionR7 | -0.14 | 7.137 | 0.56981 | 1.00000 | |
| RegionR8 | -0.264 | 7.137 | 0.34068 | 0.97449 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.038 | 7.137 | 0.08738 | 0.79223 | |
| RegenerationR2 | 0.056 | 7.137 | 0.83391 | 0.99901 | |
| RegenerationR3 | 0.01 | 7.137 | 0.97212 | 1.00000 | |
| RegenerationR4 | -0.036 | 7.137 | 0.89707 | 1.00000 | |
| RegenerationR5 | -0.076 | 7.137 | 0.77616 | 0.98039 | |
| RegenerationR6 | -0.284 | 7.137 | 0.29968 | 0.64977 | |
| RegenerationBL | -0.166 | 7.137 | 0.51922 | 0.88164 | |
| RegenerationTP | 0.002 | 7.137 | 0.99488 | 1.00000 |
Genes with expression patterns similar to MligTC455_43262
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43262 | 6461 | 134.61 | Mlig455_011242 | Neo: - Age: logFC(26M/2M)=-0.227 |
ARPC3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_011242 {REF} {Length: 1024} {TRANSSPLICED} {Pfam: ARP2/3 complex ARPC3 (21 kDa) subunit [PF04062.16, score=254.3]} {Human: ENSG00000111229, ARPC3, actin related protein 2/3 complex subunit 3, [RH, Score=238, Expect=1e-80]} {Mouse: ENSMUSG00000029465, Arpc3, actin related protein 2/3 complex, subunit 3, [RH, Score=236, Expect=4e-80]} {Dmel: FBgn0038369, Arpc3A, Actin-related protein 2/3 complex, subunit 3A, [RH, Score=225, Expect=8e-76]} {Celegans: WBGene00000203, arx-5, Probable actin-related protein 2/3 complex subunit 3, [RH, Score=171, Expect=2e-54]} {Smed: dd_Smed_v6_4649_0_1, dd_Smed_v6_4649_0_1, [RH, Score=232, Expect=9e-79]} {RNA1509_45670, RNA1509_53736} {RNA1310_7583.2, RNA1509_45670} {RNA1509_45670, RNA815_3441} |
| 2. | MligTC455_34935 | 417 | 8.69 | Mlig455_031682 | Neo: - Age: - |
MFSD12 | 1.788 | - | - | - | - | 0.950 | 0.838 | Mlig455_031682 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: MFS/sugar transport protein [PF13347.8, score=69.1]; Major Facilitator Superfamily [PF07690.18, score=60.4]} {Human: ENSG00000161091, MFSD12, major facilitator superfamily domain containing 12, [RH, Score=310, Expect=3e-100]} {Mouse: ENSMUSG00000034854, Mfsd12, major facilitator superfamily domain containing 12, [RH, Score=306, Expect=1e-98]} {Celegans: WBGene00017530, F16H11.1, [RH, Score=291, Expect=9e-93]} {Smed: dd_Smed_v6_7077_0_1, dd_Smed_v6_7077_0_1, [RH, Score=310, Expect=2e-100]} {RNA1509_35303, RNA1509_39794} {RNA1310_17953, RNA1509_35303, RNA1509_39794} {RNA1509_35303, RNA1509_39794, RNA815_7362.1} |
| 3. | MligTC455_39846 | 11660 | 242.93 | Mlig455_004341, Mlig455_004353 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.306 Region-enriched R4: 1.674/0.00000 Regeneration-enriched BL: 1.619 |
CCT7 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_004341 {REF} {Length: 2438} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1310_8189.1, RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695} {RNA1509_24098, RNA1509_34419, RNA1509_660, RNA1509_8695, RNA815_2882.1} Mlig455_004353 {REF} {Length: 2426} {TRANSSPLICED} {Pfam: TCP-1/cpn60 chaperonin family [PF00118.26, score=505.0]} {Human: ENSG00000135624, CCT7, chaperonin containing TCP1 subunit 7, [RH, Score=821, Expect=0.0]} {Mouse: ENSMUSG00000030007, Cct7, chaperonin containing Tcp1, subunit 7 (eta), [RH, Score=822, Expect=0.0]} {Dmel: FBgn0037632, CCT7, Chaperonin containing TCP1 subunit 7, [RH, Score=769, Expect=0.0]} {Celegans: WBGene00020391, cct-7, Chaperonin Containing TCP-1, [RH, Score=701, Expect=0.0]} {Smed: dd_Smed_v6_847_0_1, dd_Smed_v6_847_0_1, [RH, Score=810, Expect=0.0]} {RNA1509_23051, RNA1509_8695} {RNA1310_8189.1, RNA1509_23051} {RNA1509_23051, RNA815_2882.1} |
| 4. | MligTC455_43166 | 2766 | 57.63 | Mlig455_039958, Mlig455_039971 | Neo: - Age: - |
SNAPIN | 0.955 | - | - | - | - | 0.955 | - | Mlig455_039958 {REF} {Length: 937} {TRANSSPLICED} {Pfam: Snapin/Pallidin [PF14712.8, score=80.8]} {Human: ENSG00000143553, SNAPIN, SNAP associated protein, [RH, Score=114, Expect=1e-32]} {Mouse: ENSMUSG00000001018, Snapin, SNAP-associated protein, [RH, Score=110, Expect=1e-31]} {Dmel: FBgn0031455, Snapin, SNAP associated protein, [RH, Score=62.0, Expect=7e-13]} {Celegans: WBGene00015327, snpn-1, SNAPIN protein homolog, [RH, Score=44.3, Expect=2e-06]} {Smed: dd_Smed_v6_1781_0_1, dd_Smed_v6_1781_0_1, [RH, Score=101, Expect=2e-28]} {RNA1509_8939} {RNA1310_10828} {RNA815_7128} Mlig455_039971 {REF} {Length: 2282} {Pfam: Snapin/Pallidin [PF14712.8, score=80.6]} {Human: ENSG00000143553, SNAPIN, SNAP associated protein, [RH, Score=113, Expect=2e-32]} {Mouse: ENSMUSG00000001018, Snapin, SNAP-associated protein, [RH, Score=110, Expect=3e-31]} {Dmel: FBgn0031455, Snapin, SNAP associated protein, [RH, Score=62.4, Expect=6e-13]} {Celegans: WBGene00015327, snpn-1, SNAPIN protein homolog, [RH, Score=44.7, Expect=2e-06]} {Smed: dd_Smed_v6_1781_0_1, dd_Smed_v6_1781_0_1, [RH, Score=99.4, Expect=2e-27]} {RNA1509_8939} {RNA1310_10828, RNA1509_8939} {RNA1509_8939, RNA815_7128} |
| 5. | MligTC455_27877 | 14566 | 303.46 | Mlig455_046947, Mlig455_068943 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.337 Regeneration-enriched BL: 1.337 |
DDX39B | 0.951 | - | - | - | - | 0.951 | - | Mlig455_046947 {REF} {Length: 1705} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_632} {RNA1310_17749} {RNA815_6753} Mlig455_068943 {REF} {Length: 1704} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=141.2]; Helicase conserved C-terminal domain [PF00271.33, score=92.8]; U3-containing 90S pre-ribosomal complex subunit [PF14617.8, score=33.4]; Type III restriction enzyme, res subunit [PF04851.17, score=29.8]} {Human: ENSG00000225859, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000235439, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000215425, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000225073, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000198563, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000229496, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000230624, DDX39B, DExD-box helicase 39B, [RH, Score=717, Expect=0.0]; ENSG00000123136, DDX39A, DExD-box helicase 39A, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000019432, Ddx39b, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B, [RH, Score=716, Expect=0.0]; ENSMUSG00000005481, Ddx39, DEAD (Asp-Glu-Ala-Asp) box polypeptide 39, [RH, Score=703, Expect=0.0]} {Dmel: FBgn0014189, Hel25E, Helicase at 25E, [RH, Score=699, Expect=0.0]} {Celegans: WBGene00001840, hel-1, Spliceosome RNA helicase DDX39B homolog, [RH, Score=654, Expect=0.0]} {Smed: dd_Smed_v6_724_0_1, dd_Smed_v6_724_0_1, [RH, Score=713, Expect=0.0]} {RNA1509_632} {RNA1310_17749, RNA1509_632} {RNA1509_632, RNA815_6753} |
| 6. | MligTC455_32716 | 4106 | 85.53 | Mlig455_020647, Mlig455_051282 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.234 |
0.951 | - | - | - | - | 0.951 | - | Mlig455_020647 {REF} {Length: 540} {TRANSSPLICED} {Pfam: ATP synthase regulation [PF14960.8, score=54.0]} {RNA1509_8757} {RNA1310_52206.2, RNA1509_8757} {RNA1509_8757, RNA815_26551.1} Mlig455_051282 {REF} {Length: 318} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_52253.1} {RNA815_2268.1} |
|
| 7. | MligTC455_13615 | 193 | 4.01 | Mlig455_060045 | Neo: - Age: Down-Up-Up, logFC(26M/2M)=2.251 Region-enriched R4: 3.542/0.00797 |
SLC47A1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_060045 {REF} {Length: 2303} {Pfam: MatE [PF01554.20, score=191.3]; Polysaccharide biosynthesis C-terminal domain [PF14667.8, score=24.1]} {Human: ENSG00000142494, SLC47A1, solute carrier family 47 member 1, [Score=305, Expect=5e-95]} {Mouse: ENSMUSG00000010122, Slc47a1, solute carrier family 47, member 1, [Score=308, Expect=1e-96]} {Smed: dd_Smed_v6_7241_0_1, dd_Smed_v6_7241_0_1, [Score=403, Expect=1e-132]} {RNA1509_33085} {RNA1310_12101, RNA1509_33085} {RNA1509_33085, RNA815_28263} |