Data search


search
Exact
Search

Results for MligTC455_43287

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43287 13827 288.07 Mlig455_024200

Neo: -

Age: -

TSPO Mlig455_024200 {REF} {Length: 1289} {TRANSSPLICED} {Pfam: TspO/MBR family [PF03073.17, score=253.6]} {Human: ENSG00000100300, TSPO, translocator protein, [RH, Score=119, Expect=2e-32]} {Mouse: ENSMUSG00000041736, Tspo, translocator protein, [RH, Score=127, Expect=6e-36]} {Dmel: FBgn0031263, Tspo, Translocator protein, [RH, Score=137, Expect=2e-39]} {Smed: dd_Smed_v6_607_1_1, dd_Smed_v6_607_1_1, [RH, Score=135, Expect=3e-39]} {RNA1509_15415, RNA1509_17418, RNA1509_32118, RNA1509_35197} {RNA1310_33347, RNA1509_15415, RNA1509_17418, RNA1509_32118, RNA1509_35197} {RNA1509_15415, RNA1509_17418, RNA1509_32118, RNA1509_35197, RNA815_17337.1}

Cumulative graph for MligTC455_43287

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.021 8.226 0.00907 0.28212
RegionR2 -0.217 8.226 0.42930 0.81951
RegionR3 0.427 8.226 0.06452 0.44884
RegionR4 0.655 8.226 0.01062 0.06388
RegionR5 0.545 8.226 0.01442 0.07598
RegionR6 0.252 8.226 0.28189 0.87183
RegionR7 -0.424 8.226 0.09068 0.57674
RegionR8 -0.217 8.226 0.40513 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.381 8.226 0.42590 1.00000
RegenerationR2 -0.25 8.226 0.40352 0.81636
RegenerationR3 -0.709 8.226 0.01969 0.25672
RegenerationR4 -0.462 8.226 0.13255 0.55043
RegenerationR5 -0.403 8.226 0.17901 0.60760
RegenerationR6 -0.37 8.226 0.22696 0.57196
RegenerationBL -0.32 8.226 0.23345 0.58555
RegenerationTP 0.033 8.226 0.90802 1.00000


Genes with expression patterns similar to MligTC455_43287

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43287 13827 288.07 Mlig455_024200

Neo: -

Age: -

TSPO 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_024200 {REF} {Length: 1289} {TRANSSPLICED} {Pfam: TspO/MBR family [PF03073.17, score=253.6]} {Human: ENSG00000100300, TSPO, translocator protein, [RH, Score=119, Expect=2e-32]} {Mouse: ENSMUSG00000041736, Tspo, translocator protein, [RH, Score=127, Expect=6e-36]} {Dmel: FBgn0031263, Tspo, Translocator protein, [RH, Score=137, Expect=2e-39]} {Smed: dd_Smed_v6_607_1_1, dd_Smed_v6_607_1_1, [RH, Score=135, Expect=3e-39]} {RNA1509_15415, RNA1509_17418, RNA1509_32118, RNA1509_35197} {RNA1310_33347, RNA1509_15415, RNA1509_17418, RNA1509_32118, RNA1509_35197} {RNA1509_15415, RNA1509_17418, RNA1509_32118, RNA1509_35197, RNA815_17337.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA