TomoSeq data search

Data search

Results for MligTC455_43318

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43318	773	16.11	Mlig455_007390, Mlig455_007487	Neo: - Age: - Region-enriched R6: 2.416/0.00383	PTCH2	Mlig455_007390 {REF} {Length: 5135} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=190, Expect=3e-48]; ENSG00000185920, PTCH1, patched 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=189, Expect=3e-48]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=264, Expect=9e-72]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=180, Expect=2e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=146, Expect=4e-35]} {RNA1509_11340} {RNA1310_1176.1, RNA1509_11340} {RNA1509_11340, RNA815_19035} Mlig455_007487 {REF} {Length: 5143} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=188, Expect=1e-47]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=187, Expect=1e-47]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=265, Expect=5e-72]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=179, Expect=3e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=143, Expect=3e-34]} {RNA1509_11340} {RNA1310_1176.1} {RNA815_19035}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43318

773

16.11

Mlig455_007390, Mlig455_007487

Neo: -

Age: -

Region-enriched R6: 2.416/0.00383

PTCH2

Mlig455_007390 {REF} {Length: 5135} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=190, Expect=3e-48]; ENSG00000185920, PTCH1, patched 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=189, Expect=3e-48]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=264, Expect=9e-72]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=180, Expect=2e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=146, Expect=4e-35]} {RNA1509_11340} {RNA1310_1176.1, RNA1509_11340} {RNA1509_11340, RNA815_19035}

Mlig455_007487 {REF} {Length: 5143} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=188, Expect=1e-47]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=187, Expect=1e-47]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=265, Expect=5e-72]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=179, Expect=3e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=143, Expect=3e-34]} {RNA1509_11340} {RNA1310_1176.1} {RNA815_19035}

Cumulative graph for MligTC455_43318

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.228	4.334	0.10892	0.68815
RegionR2	1.282	4.334	0.14470	0.47417
RegionR3	-0.339	4.334	0.93240	1.00000
RegionR4	0.404	4.334	0.65689	0.95748
RegionR5	0.608	4.334	0.48192	0.84561
RegionR6	2.416	4.334	0.00004	0.00383
RegionR7	2.058	4.334	0.00430	0.09876
RegionR8	-0.201	4.334	0.90923	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.735	4.334	0.09199	0.80142
RegenerationR2	0.216	4.334	0.65514	0.93861
RegenerationR3	0.702	4.334	0.23467	0.66898
RegenerationR4	-0.176	4.334	0.76645	0.97538
RegenerationR5	0.636	4.334	0.22892	0.66330
RegenerationR6	-0.441	4.334	0.38376	0.72399
RegenerationBL	0.218	4.334	0.72453	1.00000
RegenerationTP	0.442	4.334	0.52762	0.91873

Genes with expression patterns similar to MligTC455_43318

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43318	773	16.11	Mlig455_007390, Mlig455_007487	Neo: - Age: - Region-enriched R6: 2.416/0.00383	PTCH2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_007390 {REF} {Length: 5135} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=190, Expect=3e-48]; ENSG00000185920, PTCH1, patched 1, [RH, Score=181, Expect=3e-45]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=189, Expect=3e-48]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=264, Expect=9e-72]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=180, Expect=2e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=146, Expect=4e-35]} {RNA1509_11340} {RNA1310_1176.1, RNA1509_11340} {RNA1509_11340, RNA815_19035} Mlig455_007487 {REF} {Length: 5143} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=188, Expect=1e-47]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=187, Expect=1e-47]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=265, Expect=5e-72]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=179, Expect=3e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=143, Expect=3e-34]} {RNA1509_11340} {RNA1310_1176.1} {RNA815_19035}
2.	MligTC455_43319	387	8.05	Mlig455_007434	Neo: - Age: - Region-enriched R6: 2.253/0.01482	PTCH2	5.989	0.999	0.999	1.000	0.999	0.993	0.999	Mlig455_007434 {REF} {Length: 5132} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=189, Expect=7e-48]; ENSG00000185920, PTCH1, patched 1, [RH, Score=180, Expect=4e-45]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=188, Expect=6e-48]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=269, Expect=3e-73]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=179, Expect=2e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=144, Expect=1e-34]} {RNA1509_11340} {RNA1310_1176.1} {RNA815_19035}
3.	MligTC455_26285	1067	22.23	Mlig455_041966	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.613 Regeneration-enriched TP: 3.474 Regeneration-enriched BL: 3.163	KLF18	0.964	-	-	-	0.964	-	-	Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43318

773

16.11

Mlig455_007390, Mlig455_007487

Neo: -

Age: -

Region-enriched R6: 2.416/0.00383

PTCH2

1.000

MligTC455_43319

387

8.05

Mlig455_007434

Neo: -

Age: -

Region-enriched R6: 2.253/0.01482

PTCH2

5.989

0.999

1.000

0.999

0.993

0.999

Mlig455_007434 {REF} {Length: 5132} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=35.0]} {Human: ENSG00000117425, PTCH2, patched 2, [RH, Score=189, Expect=7e-48]; ENSG00000185920, PTCH1, patched 1, [RH, Score=180, Expect=4e-45]} {Mouse: ENSMUSG00000028681, Ptch2, patched 2, [RH, Score=188, Expect=6e-48]} {Dmel: FBgn0003892, ptc, patched, [RH, Score=269, Expect=3e-73]} {Celegans: WBGene00004208, ptc-1, Protein patched homolog 1, [RH, Score=179, Expect=2e-45]} {Smed: dd_Smed_v6_7063_0_2, dd_Smed_v6_7063_0_2, [RH, Score=144, Expect=1e-34]} {RNA1509_11340} {RNA1310_1176.1} {RNA815_19035}

MligTC455_26285

1067

22.23

Mlig455_041966

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.613

Regeneration-enriched TP: 3.474
Regeneration-enriched BL: 3.163

KLF18

0.964

Mlig455_041966 {REF} {Length: 15412} {Human: ENSG00000283039, KLF18, Kruppel like factor 18, [Score=83.2, Expect=1e-15]} {Dmel: FBgn0003374, Sgs4, Salivary gland secretion 4, [Score=79.0, Expect=1e-15]} {RNA1509_56304} {RNA1310_9089.1} {RNA815_7548.2}