TomoSeq data search

Data search

Results for MligTC455_43335

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43335	293	6.09	Mlig455_002006	Neo: - Age: -	SNX13	Mlig455_002006 {REF} {Length: 4932} {TRANSSPLICED} {Pfam: PXA domain [PF02194.17, score=126.9]; Sorting nexin C terminal [PF08628.14, score=76.9]; PX domain [PF00787.26, score=42.1]; Regulator of G protein signaling domain [PF00615.21, score=28.6]} {Human: ENSG00000071189, SNX13, sorting nexin 13, [RH, Score=373, Expect=9e-113]} {Mouse: ENSMUSG00000020590, Snx13, sorting nexin 13, [RH, Score=387, Expect=2e-118]} {Dmel: FBgn0029976, snz, snazarus, [RH, Score=83.2, Expect=9e-16]} {Celegans: WBGene00013803, snx-13, Sorting NeXin, [RH, Score=318, Expect=4e-93]} {Smed: dd_Smed_v6_4243_0_1, dd_Smed_v6_4243_0_1, [RH, Score=373, Expect=1e-113]} {RNA1509_12914, RNA1509_27660} {RNA1310_1261.1, RNA1509_27660} {RNA1509_27660, RNA815_1178}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43335

293

6.09

Mlig455_002006

Neo: -

Age: -

SNX13

Mlig455_002006 {REF} {Length: 4932} {TRANSSPLICED} {Pfam: PXA domain [PF02194.17, score=126.9]; Sorting nexin C terminal [PF08628.14, score=76.9]; PX domain [PF00787.26, score=42.1]; Regulator of G protein signaling domain [PF00615.21, score=28.6]} {Human: ENSG00000071189, SNX13, sorting nexin 13, [RH, Score=373, Expect=9e-113]} {Mouse: ENSMUSG00000020590, Snx13, sorting nexin 13, [RH, Score=387, Expect=2e-118]} {Dmel: FBgn0029976, snz, snazarus, [RH, Score=83.2, Expect=9e-16]} {Celegans: WBGene00013803, snx-13, Sorting NeXin, [RH, Score=318, Expect=4e-93]} {Smed: dd_Smed_v6_4243_0_1, dd_Smed_v6_4243_0_1, [RH, Score=373, Expect=1e-113]} {RNA1509_12914, RNA1509_27660} {RNA1310_1261.1, RNA1509_27660} {RNA1509_27660, RNA815_1178}

Cumulative graph for MligTC455_43335

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.69	3.115	0.59484	1.00000
RegionR2	0.01	3.115	0.98855	1.00000
RegionR3	-0.098	3.115	0.81640	1.00000
RegionR4	0.05	3.115	0.92373	1.00000
RegionR5	-0.12	3.115	0.74834	1.00000
RegionR6	-0.375	3.115	0.41627	0.98479
RegionR7	0.225	3.115	0.70668	1.00000
RegionR8	-0.382	3.115	0.64267	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-5.827	3.115	0.23666	0.96575
RegenerationR2	0.434	3.115	0.34205	0.77656
RegenerationR3	0.032	3.115	0.94870	1.00000
RegenerationR4	-0.134	3.115	0.80380	0.98748
RegenerationR5	0.327	3.115	0.46889	0.84132
RegenerationR6	-0.078	3.115	0.89488	1.00000
RegenerationBL	0.458	3.115	0.53112	0.89089
RegenerationTP	-0.247	3.115	0.75718	1.00000

Genes with expression patterns similar to MligTC455_43335

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43335	293	6.09	Mlig455_002006	Neo: - Age: -	SNX13	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_002006 {REF} {Length: 4932} {TRANSSPLICED} {Pfam: PXA domain [PF02194.17, score=126.9]; Sorting nexin C terminal [PF08628.14, score=76.9]; PX domain [PF00787.26, score=42.1]; Regulator of G protein signaling domain [PF00615.21, score=28.6]} {Human: ENSG00000071189, SNX13, sorting nexin 13, [RH, Score=373, Expect=9e-113]} {Mouse: ENSMUSG00000020590, Snx13, sorting nexin 13, [RH, Score=387, Expect=2e-118]} {Dmel: FBgn0029976, snz, snazarus, [RH, Score=83.2, Expect=9e-16]} {Celegans: WBGene00013803, snx-13, Sorting NeXin, [RH, Score=318, Expect=4e-93]} {Smed: dd_Smed_v6_4243_0_1, dd_Smed_v6_4243_0_1, [RH, Score=373, Expect=1e-113]} {RNA1509_12914, RNA1509_27660} {RNA1310_1261.1, RNA1509_27660} {RNA1509_27660, RNA815_1178}
2.	MligTC455_15473	216	4.51	Mlig455_063690	Neo: Neoblast, stringent Age: logFC(26M/2M)=0.405 Region-enriched R5: 2.689/0.00003	CHEK1	0.972	-	-	0.972	-	-	-	Mlig455_063690 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=1e-61]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=2e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170} {RNA1310_7988} {RNA815_13053}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43335

293

6.09

Mlig455_002006

Neo: -

Age: -

SNX13

1.000

MligTC455_15473

216

4.51

Mlig455_063690

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.405

Region-enriched R5: 2.689/0.00003

CHEK1

0.972

Mlig455_063690 {REF} {Length: 2686} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=161.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.6]; Kinase-like [PF14531.8, score=18.3]} {Human: ENSG00000149554, CHEK1, checkpoint kinase 1, [RH, Score=219, Expect=3e-64]} {Mouse: ENSMUSG00000032113, Chek1, checkpoint kinase 1, [RH, Score=207, Expect=4e-60]} {Dmel: FBgn0261278, grp, grapes, [RH, Score=213, Expect=1e-61]} {Celegans: WBGene00000498, chk-1, Serine/threonine-protein kinase chk-1, [RH, Score=208, Expect=2e-60]} {Smed: dd_Smed_v6_12789_0_1, dd_Smed_v6_12789_0_1, [Score=124, Expect=3e-30]} {RNA1509_12170} {RNA1310_7988} {RNA815_13053}