Data search
Results for MligTC455_43341
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43341 | 107 | 2.22 | Mlig455_013295, Mlig455_035943 | Neo: - Age: - |
Mlig455_013295 {REF} {Length: 2941} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.6]} {RNA1509_11613} {RNA1310_15183.2} {RNA815_482.1} Mlig455_035943 {REF} {Length: 4566} {RNA1509_11613, RNA1509_46976} {RNA1310_12893, RNA1509_11613, RNA1509_46976} {RNA1509_11613, RNA1509_46976, RNA815_3259.1} |
Cumulative graph for MligTC455_43341
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.199 | 1.946 | 0.43153 | 1.00000 | |
| RegionR2 | 1.16 | 1.946 | 0.36213 | 0.75694 | |
| RegionR3 | 0.229 | 1.946 | 0.77241 | 1.00000 | |
| RegionR4 | -1.162 | 1.946 | 0.99279 | 1.00000 | |
| RegionR5 | -0.394 | 1.946 | 0.94568 | 1.00000 | |
| RegionR6 | 1.393 | 1.946 | 0.15393 | 0.69984 | |
| RegionR7 | 0.098 | 1.946 | 0.85077 | 1.00000 | |
| RegionR8 | 2.876 | 1.946 | 0.02304 | 0.29573 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.025 | 1.946 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.24 | 1.946 | 0.07813 | 0.45130 | |
| RegenerationR3 | 1.347 | 1.946 | 0.15892 | 0.59097 | |
| RegenerationR4 | 1.25 | 1.946 | 0.20466 | 0.65094 | |
| RegenerationR5 | 0.726 | 1.946 | 0.41898 | 0.81054 | |
| RegenerationR6 | 0.471 | 1.946 | 0.58668 | 0.86168 | |
| RegenerationBL | 0.329 | 1.946 | 0.75234 | 1.00000 | |
| RegenerationTP | -0.738 | 1.946 | 0.58751 | 0.95412 |
Genes with expression patterns similar to MligTC455_43341
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43341 | 107 | 2.22 | Mlig455_013295, Mlig455_035943 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013295 {REF} {Length: 2941} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=21.6]} {RNA1509_11613} {RNA1310_15183.2} {RNA815_482.1} Mlig455_035943 {REF} {Length: 4566} {RNA1509_11613, RNA1509_46976} {RNA1310_12893, RNA1509_11613, RNA1509_46976} {RNA1509_11613, RNA1509_46976, RNA815_3259.1} |
|
| 2. | MligTC455_27064 | 49 | 1.03 | Mlig455_031843 | Neo: - Age: - |
1.777 | - | - | - | 0.797 | - | 0.980 | Mlig455_031843 {REF} {Length: 536} {RNA1509_44223} {RNA1310_99471} {RNA815_64986} | |
| 3. | MligTC455_26734 | 271 | 5.64 | Mlig455_025877 | Neo: - Age: - |
NR3C1 | 1.75 | - | - | 0.773 | - | 0.977 | - | Mlig455_025877 {REF} {Length: 2456} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=68.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=63.4]} {Human: ENSG00000113580, NR3C1, nuclear receptor subfamily 3 group C member 1, [Score=108, Expect=1e-24]; ENSG00000082175, PGR, progesterone receptor, [Score=107, Expect=2e-24]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=105, Expect=3e-24]} {Mouse: ENSMUSG00000031870, Pgr, progesterone receptor, [Score=112, Expect=4e-26]; ENSMUSG00000024431, Nr3c1, nuclear receptor subfamily 3, group C, member 1, [Score=110, Expect=1e-25]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=102, Expect=2e-23]} {Celegans: WBGene00003622, nhr-23, Nuclear hormone receptor family member nhr-23, [Score=80.5, Expect=3e-16]} {Smed: dd_Smed_v6_33286_0_1, dd_Smed_v6_33286_0_1, [Score=89.0, Expect=6e-19]} {RNA1509_24832} {RNA1310_23073.1, RNA1509_24832} {RNA1509_24832, RNA815_12901} |
| 4. | MligTC455_44817 | 674 | 14.05 | Mlig455_061700, Mlig455_063111 | Neo: - Age: logFC(26M/2M)=0.685 |
KIAA0556 | 1.667 | - | - | 0.961 | - | 0.706 | - | Mlig455_061700 {REF} {Length: 5757} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4457) [PF14652.8, score=566.4]} {Human: ENSG00000047578, KIAA0556, KIAA0556, [RH, Score=566, Expect=3e-175]} {Mouse: ENSMUSG00000032743, D430042O09Rik, RIKEN cDNA D430042O09 gene, [RH, Score=577, Expect=1e-179]} {Celegans: WBGene00019395, K04F10.2, Protein KIAA0556 homolog, [RH, Score=270, Expect=3e-78]} {Smed: dd_Smed_v6_10945_0_1, dd_Smed_v6_10945_0_1, [RH, Score=540, Expect=2e-169]} {RNA1509_53875} {RNA1310_1299.2} {RNA815_6090} Mlig455_063111 {REF} {Length: 5764} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4457) [PF14652.8, score=566.4]} {Human: ENSG00000047578, KIAA0556, KIAA0556, [RH, Score=566, Expect=3e-175]} {Mouse: ENSMUSG00000032743, D430042O09Rik, RIKEN cDNA D430042O09 gene, [RH, Score=577, Expect=1e-179]} {Celegans: WBGene00019395, K04F10.2, Protein KIAA0556 homolog, [RH, Score=270, Expect=3e-78]} {Smed: dd_Smed_v6_10945_0_1, dd_Smed_v6_10945_0_1, [RH, Score=540, Expect=2e-169]} {RNA1509_40508, RNA1509_52587, RNA1509_53875} {RNA1310_1299.2, RNA1509_40508, RNA1509_52587} {RNA1509_40508, RNA1509_52587, RNA815_6090} |
| 5. | MligTC455_21762 | 134 | 2.8 | Mlig455_031432 | Neo: - Age: - |
0.964 | - | - | - | - | - | 0.964 | Mlig455_031432 {REF} {Length: 284} {NoTransDecoderORF} {RNA1509_42914} {RNA1310_99471} {RNA815_64986} | |
| 6. | MligTC455_07620 | 312 | 6.49 | Mlig455_068229 | Neo: - Age: logFC(26M/2M)=-0.302 |
UNK | 0.957 | - | - | - | - | - | 0.957 | Mlig455_068229 {REF} {Length: 5152} {Pfam: Unkempt Zinc finger domain 1 (Znf1) [PF18384.3, score=68.1]; Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=24.9]} {Human: ENSG00000132478, UNK, unkempt family zinc finger, [RH, Score=436, Expect=2e-140]} {Mouse: ENSMUSG00000020770, Unk, unkempt family zinc finger, [RH, Score=435, Expect=2e-140]} {Dmel: FBgn0004395, unk, unkempt, [RH, Score=414, Expect=6e-134]} {Celegans: WBGene00016407, C34D10.2, [RH, Score=418, Expect=9e-136]} {Smed: dd_Smed_v6_3128_1_1, dd_Smed_v6_3128_1_1, [RH, Score=483, Expect=5e-160]} {RNA1509_46130, RNA1509_54852, RNA1509_7679} {RNA1310_1262.1, RNA1509_46130, RNA1509_54852, RNA1509_7679} {RNA1509_46130, RNA1509_54852, RNA1509_7679, RNA815_4161} |
| 7. | MligTC455_49763 | 130 | 2.72 | Mlig455_006404 | Neo: - Age: - Region-enriched R2: 3.029/0.02346 |
KREMEN1 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_006404 {REF} {Length: 1879} {Pfam: WSC domain [PF01822.21, score=53.7]; PAN domain [PF00024.28, score=24.0]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=45.1, Expect=1e-05]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=44.7, Expect=1e-05]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=47.8, Expect=9e-07]} {RNA1509_53783} {RNA1310_43597} {RNA815_9084.2} |
| 8. | MligTC455_30273 | 605 | 12.6 | Mlig455_024330, Mlig455_031995, Mlig455_064028 | Neo: - Age: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_024330 {REF} {Length: 4081} {Celegans: WBGene00022511, ZC53.4, [Score=216, Expect=4e-63]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=160, Expect=8e-47]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_031995 {REF} {Length: 1417} {Celegans: WBGene00022511, ZC53.4, [Score=81.6, Expect=1e-18]} {Smed: dd_Smed_v6_23154_0_1, dd_Smed_v6_23154_0_1, [Score=60.1, Expect=7e-12]} {RNA1509_8946} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_064028 {REF} {Length: 325} {RNA1509_13206} {RNA1310_17473} {RNA815_1342.1} |
|
| 9. | MligTC455_17678 | 121 | 2.53 | Mlig455_036741 | Neo: - Age: - Region-enriched R2: 3.030/0.00234 Regeneration-downregulated R4: -3.160 Regeneration-depleted R4: -3.160 |
TNNC2 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_036741 {REF} {Length: 924} {Pfam: EF-hand domain pair [PF13499.8, score=100.6]; EF-hand domain [PF13405.8, score=75.3]; EF hand [PF00036.34, score=73.4]; EF-hand domain pair [PF13833.8, score=55.4]; EF hand [PF13202.8, score=44.0]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=23.7]; EF-hand domain [PF14658.8, score=20.3]} {Human: ENSG00000101470, TNNC2, troponin C2, fast skeletal type, [Score=74.7, Expect=4e-17]} {Mouse: ENSMUSG00000017300, Tnnc2, troponin C2, fast, [Score=74.7, Expect=3e-17]} {Dmel: FBgn0040351, CG11638, [Score=68.6, Expect=5e-14]} {Celegans: WBGene00000286, cal-2, CALmodulin related genes; Calmodulin-like protein, [Score=72.0, Expect=3e-16]} {Smed: dd_Smed_v6_4669_0_1, dd_Smed_v6_4669_0_1, [Score=68.2, Expect=4e-15]} {RNA1310_42119} {RNA815_21011} |
| 10. | MligTC455_27834 | 437 | 9.11 | Mlig455_003625, Mlig455_044671 | Neo: - Age: logFC(26M/2M)=1.954 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_003625 {REF} {Length: 8904} {TRANSSPLICED} {Pfam: Integrase zinc binding domain [PF17921.3, score=71.1]; Integrase core domain [PF00665.28, score=51.2]; DDE superfamily endonuclease [PF13358.8, score=21.8]} {Smed: dd_Smed_v6_1574_6_72, dd_Smed_v6_1574_6_72, [Score=205, Expect=2e-60]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} Mlig455_044671 {REF} {Length: 10362} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_6137} {RNA1310_131.1} {RNA815_52.1} |