TomoSeq data search

Data search

Results for MligTC455_43344

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43344	1787	37.22	Mlig455_026876, Mlig455_030778	Neo: - Age: logFC(26M/2M)=0.199	AARS	Mlig455_026876 {REF} {Length: 5165} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=702.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=60.7]; DHHA1 domain [PF02272.21, score=45.8]} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [RH, Score=1162, Expect=0.0]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [RH, Score=1132, Expect=0.0]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [RH, Score=1113, Expect=0.0]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [RH, Score=1041, Expect=0.0]} {RNA1509_2824, RNA1509_45638} {RNA1310_4413, RNA1509_2824, RNA1509_45638} {RNA1509_2824, RNA1509_45638, RNA815_1373.1} Mlig455_030778 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=702.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=60.7]; DHHA1 domain [PF02272.21, score=46.0]} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [RH, Score=1161, Expect=0.0]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [RH, Score=1133, Expect=0.0]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [RH, Score=1113, Expect=0.0]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [RH, Score=1044, Expect=0.0]} {RNA1509_2824} {RNA1310_4413} {RNA815_1373.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43344

1787

37.22

Mlig455_026876, Mlig455_030778

Neo: -

Age: logFC(26M/2M)=0.199

AARS

Mlig455_026876 {REF} {Length: 5165} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=702.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=60.7]; DHHA1 domain [PF02272.21, score=45.8]} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [RH, Score=1162, Expect=0.0]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [RH, Score=1132, Expect=0.0]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [RH, Score=1113, Expect=0.0]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [RH, Score=1041, Expect=0.0]} {RNA1509_2824, RNA1509_45638} {RNA1310_4413, RNA1509_2824, RNA1509_45638} {RNA1509_2824, RNA1509_45638, RNA815_1373.1}

Mlig455_030778 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=702.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=60.7]; DHHA1 domain [PF02272.21, score=46.0]} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [RH, Score=1161, Expect=0.0]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [RH, Score=1133, Expect=0.0]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [RH, Score=1113, Expect=0.0]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [RH, Score=1044, Expect=0.0]} {RNA1509_2824} {RNA1310_4413} {RNA815_1373.1}

Cumulative graph for MligTC455_43344

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.252	5.359	0.72512	1.00000
RegionR2	0.259	5.359	0.49894	0.87868
RegionR3	0.165	5.359	0.59350	1.00000
RegionR4	-0.111	5.359	0.76642	1.00000
RegionR5	0.467	5.359	0.08803	0.27948
RegionR6	-0.173	5.359	0.59222	1.00000
RegionR7	-0.392	5.359	0.29814	0.93278
RegionR8	-0.467	5.359	0.30015	0.93092

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.541	5.359	0.59272	1.00000
RegenerationR2	0.718	5.359	0.04014	0.33119
RegenerationR3	0.554	5.359	0.15558	0.58643
RegenerationR4	1.049	5.359	0.00864	0.13887
RegenerationR5	0.881	5.359	0.01351	0.20328
RegenerationR6	1.234	5.359	0.00122	0.03855
RegenerationBL	1.37	5.359	0.00053	0.01464
RegenerationTP	0.929	5.359	0.04360	0.34677

Genes with expression patterns similar to MligTC455_43344

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43344	1787	37.22	Mlig455_026876, Mlig455_030778	Neo: - Age: logFC(26M/2M)=0.199	AARS	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026876 {REF} {Length: 5165} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=702.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=60.7]; DHHA1 domain [PF02272.21, score=45.8]} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [RH, Score=1162, Expect=0.0]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [RH, Score=1132, Expect=0.0]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [RH, Score=1113, Expect=0.0]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [RH, Score=1041, Expect=0.0]} {RNA1509_2824, RNA1509_45638} {RNA1310_4413, RNA1509_2824, RNA1509_45638} {RNA1509_2824, RNA1509_45638, RNA815_1373.1} Mlig455_030778 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: tRNA synthetases class II (A) [PF01411.21, score=702.1]; Threonyl and Alanyl tRNA synthetase second additional domain [PF07973.16, score=60.7]; DHHA1 domain [PF02272.21, score=46.0]} {Human: ENSG00000090861, AARS, alanyl-tRNA synthetase, [RH, Score=1161, Expect=0.0]} {Mouse: ENSMUSG00000031960, Aars, alanyl-tRNA synthetase, [RH, Score=1157, Expect=0.0]} {Dmel: FBgn0027094, AlaRS, Alanyl-tRNA synthetase, [RH, Score=1133, Expect=0.0]} {Celegans: WBGene00000197, aars-2, Alanine--tRNA ligase, cytoplasmic, [RH, Score=1113, Expect=0.0]} {Smed: dd_Smed_v6_4233_0_1, dd_Smed_v6_4233_0_1, [RH, Score=1044, Expect=0.0]} {RNA1509_2824} {RNA1310_4413} {RNA815_1373.1}
2.	MligTC455_26224	599	12.49	Mlig455_012487	Neo: - Age: Up-Down-Down	SUPT6H	0.965	-	-	-	0.965	-	-	Mlig455_012487 {REF} {Length: 7243} {TRANSSPLICED} {Pfam: SH2 domain [PF14633.8, score=241.6]; Helix-hairpin-helix motif [PF14635.8, score=108.6]; Holliday-junction resolvase-like of SPT6 [PF14639.8, score=104.4]; Helix-turn-helix DNA-binding domain of SPT6 [PF14641.8, score=71.2]; HHH domain [PF17674.3, score=40.3]; Tex protein YqgF-like domain [PF16921.7, score=34.9]; S1 RNA binding domain [PF00575.25, score=31.6]; Acidic N-terminal SPT6 [PF14632.8, score=27.7]; Tex-like protein N-terminal domain [PF09371.12, score=21.1]; SH2 domain [PF00017.26, score=19.8]} {Human: ENSG00000109111, SUPT6H, SPT6 homolog, histone chaperone, [RH, Score=1137, Expect=0.0]} {Mouse: ENSMUSG00000002052, Supt6, suppressor of Ty 6, [RH, Score=1133, Expect=0.0]} {Dmel: FBgn0028982, Spt6, [RH, Score=982, Expect=0.0]} {Celegans: WBGene00001259, emb-5, Suppressor of Ty 6 homolog, [RH, Score=724, Expect=0.0]} {Smed: dd_Smed_v6_3968_0_2, dd_Smed_v6_3968_0_2, [Score=839, Expect=0.0]} {RNA1509_26055, RNA1509_3566} {RNA1310_772.1, RNA1509_26055} {RNA1509_26055, RNA815_434}
3.	MligTC455_14558	332	6.93	Mlig455_069112	Neo: - Age: Down-Up-Down	ETFRF1	0.952	-	-	-	0.952	-	-	Mlig455_069112 {REF} {Length: 2209} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=40.9]; Complex1_LYR-like [PF13233.8, score=27.6]} {Human: ENSG00000205707, ETFRF1, electron transfer flavoprotein regulatory factor 1, [RH, Score=98.2, Expect=1e-27]} {Mouse: ENSMUSG00000040370, Etfrf1, electron transfer flavoprotein regulatory factor 1, [RH, Score=119, Expect=5e-36]} {Dmel: FBgn0040985, CG6115, [RH, Score=75.5, Expect=4e-19]} {Celegans: WBGene00012780, Y42A5A.5, [RH, Score=115, Expect=8e-35]} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1310_65323, RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380} {RNA1509_29278, RNA1509_31931, RNA1509_36282, RNA1509_51380, RNA815_18968.1}
4.	MligTC455_33952	690	14.38	Mlig455_026012, Mlig455_067033, Mlig455_070437	Neo: Int S/G2/M Age: -		0.95	-	-	-	0.950	-	-	Mlig455_026012 {REF} {Length: 164} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_6715} {RNA1310_81903} {RNA815_4239} Mlig455_067033 {REF} {Length: 671} {NoTransDecoderORF} {RNA1509_29843} {RNA1310_21516.1} {RNA815_34440} Mlig455_070437 {REF} {Length: 6111} {TRANSSPLICED} {RNA1509_16949, RNA1509_6715} {RNA1310_1532, RNA1509_16949, RNA1509_6715} {RNA1509_16949, RNA1509_6715, RNA815_1607}