TomoSeq data search

Data search

Results for MligTC455_43380

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43380	904	18.84	Mlig455_011654	Neo: - Age: logFC(26M/2M)=-0.254	MAP3K4	Mlig455_011654 {REF} {Length: 4359} {Pfam: Protein kinase domain [PF00069.27, score=141.2]; Caspase domain [PF00656.24, score=127.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.4]; Ankyrin repeats (3 copies) [PF12796.9, score=67.1]; Ankyrin repeat [PF00023.32, score=36.4]; Ankyrin repeat [PF13606.8, score=36.0]; Ankyrin repeats (many copies) [PF13637.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=32.0]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=110, Expect=1e-23]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=108, Expect=2e-23]} {Dmel: FBgn0024329, Mekk1, [Score=105, Expect=1e-22]} {Celegans: WBGene00007287, gck-4, Germinal Center Kinase family, [Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=94.4, Expect=7e-21]} {RNA1509_33539, RNA1509_5399} {RNA1310_1984.2, RNA1509_33539, RNA1509_5399} {RNA1509_33539, RNA1509_5399, RNA815_828.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43380

904

18.84

Mlig455_011654

Neo: -

Age: logFC(26M/2M)=-0.254

MAP3K4

Mlig455_011654 {REF} {Length: 4359} {Pfam: Protein kinase domain [PF00069.27, score=141.2]; Caspase domain [PF00656.24, score=127.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.4]; Ankyrin repeats (3 copies) [PF12796.9, score=67.1]; Ankyrin repeat [PF00023.32, score=36.4]; Ankyrin repeat [PF13606.8, score=36.0]; Ankyrin repeats (many copies) [PF13637.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=32.0]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=110, Expect=1e-23]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=108, Expect=2e-23]} {Dmel: FBgn0024329, Mekk1, [Score=105, Expect=1e-22]} {Celegans: WBGene00007287, gck-4, Germinal Center Kinase family, [Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=94.4, Expect=7e-21]} {RNA1509_33539, RNA1509_5399} {RNA1310_1984.2, RNA1509_33539, RNA1509_5399} {RNA1509_33539, RNA1509_5399, RNA815_828.1}

Cumulative graph for MligTC455_43380

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-8.058	4.465	0.00452	0.21236
RegionR2	0.998	4.465	0.25207	0.63136
RegionR3	1.028	4.465	0.18716	0.72252
RegionR4	0.802	4.465	0.38110	0.70568
RegionR5	0.908	4.465	0.25451	0.57225
RegionR6	1.269	4.465	0.08197	0.52968
RegionR7	1.43	4.465	0.05739	0.46026
RegionR8	1.623	4.465	0.04924	0.43549

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.932	4.465	0.07051	0.75209
RegenerationR2	-0.242	4.465	0.64438	0.93344
RegenerationR3	-0.445	4.465	0.42148	0.81637
RegenerationR4	-0.568	4.465	0.32427	0.76171
RegenerationR5	-0.694	4.465	0.18557	0.61596
RegenerationR6	-0.89	4.465	0.11382	0.41558
RegenerationBL	-0.988	4.465	0.07713	0.32423
RegenerationTP	-0.867	4.465	0.13643	0.55401

Genes with expression patterns similar to MligTC455_43380

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43380	904	18.84	Mlig455_011654	Neo: - Age: logFC(26M/2M)=-0.254	MAP3K4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_011654 {REF} {Length: 4359} {Pfam: Protein kinase domain [PF00069.27, score=141.2]; Caspase domain [PF00656.24, score=127.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=99.4]; Ankyrin repeats (3 copies) [PF12796.9, score=67.1]; Ankyrin repeat [PF00023.32, score=36.4]; Ankyrin repeat [PF13606.8, score=36.0]; Ankyrin repeats (many copies) [PF13637.8, score=33.0]; Ankyrin repeats (many copies) [PF13857.8, score=32.0]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=110, Expect=1e-23]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=108, Expect=2e-23]} {Dmel: FBgn0024329, Mekk1, [Score=105, Expect=1e-22]} {Celegans: WBGene00007287, gck-4, Germinal Center Kinase family, [Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_8347_0_2, dd_Smed_v6_8347_0_2, [Score=94.4, Expect=7e-21]} {RNA1509_33539, RNA1509_5399} {RNA1310_1984.2, RNA1509_33539, RNA1509_5399} {RNA1509_33539, RNA1509_5399, RNA815_828.1}
2.	MligTC455_30513	1212	25.24	Mlig455_057486, Mlig455_070347	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.223	CPNE8	2.411	0.960	0.704	-	-	-	0.747	Mlig455_057486 {REF} {Length: 3921} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=263.2]; C2 domain [PF00168.32, score=69.4]; vWA found in TerF C terminus [PF10138.11, score=30.2]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=439, Expect=1e-146]; ENSG00000085719, CPNE3, copine 3, [Score=437, Expect=2e-146]; ENSG00000214078, CPNE1, copine 1, [Score=430, Expect=1e-143]; ENSG00000144550, CPNE9, copine family member 9, [Score=429, Expect=4e-143]; ENSG00000140848, CPNE2, copine 2, [Score=429, Expect=5e-143]; ENSG00000124772, CPNE5, copine 5, [Score=428, Expect=3e-142]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [Score=438, Expect=2e-146]; ENSMUSG00000028228, Cpne3, copine III, [Score=435, Expect=7e-146]; ENSMUSG00000024008, Cpne5, copine V, [Score=432, Expect=7e-144]; ENSMUSG00000034361, Cpne2, copine II, [Score=427, Expect=2e-142]; ENSMUSG00000030270, Cpne9, copine family member IX, [Score=427, Expect=2e-142]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=359, Expect=2e-115]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_8629} {RNA1310_8127.1} {RNA815_15715} Mlig455_070347 {REF} {Length: 3863} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=263.0]; C2 domain [PF00168.32, score=71.9]; vWA found in TerF C terminus [PF10138.11, score=30.2]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=437, Expect=7e-146]; ENSG00000085719, CPNE3, copine 3, [Score=436, Expect=7e-146]; ENSG00000144550, CPNE9, copine family member 9, [Score=431, Expect=1e-143]; ENSG00000124772, CPNE5, copine 5, [Score=431, Expect=4e-143]; ENSG00000140848, CPNE2, copine 2, [Score=429, Expect=5e-143]; ENSG00000214078, CPNE1, copine 1, [Score=426, Expect=3e-142]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [Score=436, Expect=2e-145]; ENSMUSG00000024008, Cpne5, copine V, [Score=434, Expect=1e-144]; ENSMUSG00000028228, Cpne3, copine III, [Score=434, Expect=2e-145]; ENSMUSG00000030270, Cpne9, copine family member IX, [Score=429, Expect=4e-143]; ENSMUSG00000034361, Cpne2, copine II, [Score=427, Expect=1e-142]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=363, Expect=6e-117]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=534, Expect=0.0]} {RNA1509_8629} {RNA1310_8127.1} {RNA815_15715}
3.	MligTC455_45027	719	14.97	Mlig455_023328	Neo: - Age: logFC(26M/2M)=-0.432	CFAP161	0.959	-	-	-	-	0.959	-	Mlig455_023328 {REF} {Length: 1614} {Human: ENSG00000156206, CFAP161, cilia and flagella associated protein 161, [RH, Score=165, Expect=1e-48]} {Mouse: ENSMUSG00000011154, Cfap161, cilia and flagella associated protein 161, [RH, Score=177, Expect=2e-53]} {Dmel: FBgn0085486, CG34457, [RH, Score=110, Expect=5e-28]} {Smed: dd_Smed_v6_8229_0_1, dd_Smed_v6_8229_0_1, [RH, Score=226, Expect=7e-73]} {RNA1509_34203, RNA1509_55466} {RNA1310_22539.1, RNA1509_34203} {RNA1509_34203, RNA815_9025}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43380

904

18.84

Mlig455_011654

Neo: -

Age: logFC(26M/2M)=-0.254

MAP3K4

1.000

MligTC455_30513

1212

25.24

Mlig455_057486, Mlig455_070347

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.223

CPNE8

2.411

0.960

0.704

0.747

Mlig455_057486 {REF} {Length: 3921} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=263.2]; C2 domain [PF00168.32, score=69.4]; vWA found in TerF C terminus [PF10138.11, score=30.2]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=439, Expect=1e-146]; ENSG00000085719, CPNE3, copine 3, [Score=437, Expect=2e-146]; ENSG00000214078, CPNE1, copine 1, [Score=430, Expect=1e-143]; ENSG00000144550, CPNE9, copine family member 9, [Score=429, Expect=4e-143]; ENSG00000140848, CPNE2, copine 2, [Score=429, Expect=5e-143]; ENSG00000124772, CPNE5, copine 5, [Score=428, Expect=3e-142]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [Score=438, Expect=2e-146]; ENSMUSG00000028228, Cpne3, copine III, [Score=435, Expect=7e-146]; ENSMUSG00000024008, Cpne5, copine V, [Score=432, Expect=7e-144]; ENSMUSG00000034361, Cpne2, copine II, [Score=427, Expect=2e-142]; ENSMUSG00000030270, Cpne9, copine family member IX, [Score=427, Expect=2e-142]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=359, Expect=2e-115]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=535, Expect=0.0]} {RNA1509_8629} {RNA1310_8127.1} {RNA815_15715}

Mlig455_070347 {REF} {Length: 3863} {TRANSSPLICED} {Pfam: Copine [PF07002.18, score=263.0]; C2 domain [PF00168.32, score=71.9]; vWA found in TerF C terminus [PF10138.11, score=30.2]} {Human: ENSG00000139117, CPNE8, copine 8, [Score=437, Expect=7e-146]; ENSG00000085719, CPNE3, copine 3, [Score=436, Expect=7e-146]; ENSG00000144550, CPNE9, copine family member 9, [Score=431, Expect=1e-143]; ENSG00000124772, CPNE5, copine 5, [Score=431, Expect=4e-143]; ENSG00000140848, CPNE2, copine 2, [Score=429, Expect=5e-143]; ENSG00000214078, CPNE1, copine 1, [Score=426, Expect=3e-142]} {Mouse: ENSMUSG00000052560, Cpne8, copine VIII, [Score=436, Expect=2e-145]; ENSMUSG00000024008, Cpne5, copine V, [Score=434, Expect=1e-144]; ENSMUSG00000028228, Cpne3, copine III, [Score=434, Expect=2e-145]; ENSMUSG00000030270, Cpne9, copine family member IX, [Score=429, Expect=4e-143]; ENSMUSG00000034361, Cpne2, copine II, [Score=427, Expect=1e-142]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=363, Expect=6e-117]} {Smed: dd_Smed_v6_2149_0_1, dd_Smed_v6_2149_0_1, [RH, Score=534, Expect=0.0]} {RNA1509_8629} {RNA1310_8127.1} {RNA815_15715}

MligTC455_45027

719

14.97

Mlig455_023328

Neo: -

Age: logFC(26M/2M)=-0.432

CFAP161

0.959

Mlig455_023328 {REF} {Length: 1614} {Human: ENSG00000156206, CFAP161, cilia and flagella associated protein 161, [RH, Score=165, Expect=1e-48]} {Mouse: ENSMUSG00000011154, Cfap161, cilia and flagella associated protein 161, [RH, Score=177, Expect=2e-53]} {Dmel: FBgn0085486, CG34457, [RH, Score=110, Expect=5e-28]} {Smed: dd_Smed_v6_8229_0_1, dd_Smed_v6_8229_0_1, [RH, Score=226, Expect=7e-73]} {RNA1509_34203, RNA1509_55466} {RNA1310_22539.1, RNA1509_34203} {RNA1509_34203, RNA815_9025}