TomoSeq data search

Data search

Results for MligTC455_43420

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43420	668	13.92	Mlig455_069408	Neo: - Age: -	AP3B2	Mlig455_069408 {REF} {Length: 5117} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=469.1]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=74.9]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.7]; HEAT repeats [PF13646.8, score=38.6]; HEAT repeat [PF02985.24, score=27.5]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=726, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=704, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=728, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=706, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [RH, Score=391, Expect=1e-118]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_22990, RNA1509_6175} {RNA1310_3729, RNA1509_22990} {RNA1509_22990, RNA815_1070}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43420

668

13.92

Mlig455_069408

Neo: -

Age: -

AP3B2

Mlig455_069408 {REF} {Length: 5117} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=469.1]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=74.9]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.7]; HEAT repeats [PF13646.8, score=38.6]; HEAT repeat [PF02985.24, score=27.5]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=726, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=704, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=728, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=706, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [RH, Score=391, Expect=1e-118]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_22990, RNA1509_6175} {RNA1310_3729, RNA1509_22990} {RNA1509_22990, RNA815_1070}

Cumulative graph for MligTC455_43420

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.384	4.128	0.70967	1.00000
RegionR2	0.38	4.128	0.43190	0.82224
RegionR3	0.496	4.128	0.18241	0.71499
RegionR4	-0.183	4.128	0.67571	0.97105
RegionR5	0.607	4.128	0.07032	0.23900
RegionR6	0.098	4.128	0.80448	1.00000
RegionR7	-0.413	4.128	0.43755	1.00000
RegionR8	-0.601	4.128	0.36359	0.99790

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.627	4.128	0.12031	0.85016
RegenerationR2	0.111	4.128	0.78643	0.98526
RegenerationR3	-0.158	4.128	0.72228	0.95520
RegenerationR4	0.563	4.128	0.21236	0.65987
RegenerationR5	0.287	4.128	0.47158	0.84258
RegenerationR6	0.853	4.128	0.05329	0.28915
RegenerationBL	0.986	4.128	0.05528	0.27214
RegenerationTP	0.651	4.128	0.28328	0.73058

Genes with expression patterns similar to MligTC455_43420

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43420	668	13.92	Mlig455_069408	Neo: - Age: -	AP3B2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_069408 {REF} {Length: 5117} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=469.1]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=74.9]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.7]; HEAT repeats [PF13646.8, score=38.6]; HEAT repeat [PF02985.24, score=27.5]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=726, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=704, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=728, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=706, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [RH, Score=391, Expect=1e-118]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=758, Expect=0.0]} {RNA1509_22990, RNA1509_6175} {RNA1310_3729, RNA1509_22990} {RNA1509_22990, RNA815_1070}
2.	MligTC455_43419	1152	24	Mlig455_005707, Mlig455_008640	Neo: - Age: -	AP3B2	4.744	0.946	-	0.989	0.936	0.896	0.977	Mlig455_005707 {REF} {Length: 5083} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=471.3]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=73.6]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.9]; HEAT repeats [PF13646.8, score=38.2]; HEAT repeat [PF02985.24, score=29.0]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=731, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=709, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=733, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=709, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [Score=392, Expect=4e-119]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=553, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_40349, RNA1509_46125} {RNA1310_3729, RNA1509_40349, RNA1509_46125} {RNA1509_40349, RNA1509_46125, RNA815_1070} Mlig455_008640 {REF} {Length: 5205} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=468.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=72.4]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.9]; HEAT repeats [PF13646.8, score=38.5]; HEAT repeat [PF02985.24, score=28.0]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=728, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=707, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=731, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [Score=392, Expect=6e-119]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=550, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_6175} {RNA1310_3729} {RNA815_1070}
3.	MligTC455_16811	599	12.47	Mlig455_063056	Neo: - Age: - Region-enriched R5: 1.301/0.00052	DUSP19	0.955	-	-	-	0.955	-	-	Mlig455_063056 {REF} {Length: 1721} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=80.8]} {Human: ENSG00000162999, DUSP19, dual specificity phosphatase 19, [Score=105, Expect=3e-27]} {Mouse: ENSMUSG00000027001, Dusp19, dual specificity phosphatase 19, [Score=102, Expect=4e-26]} {Dmel: FBgn0083992, Mkp, MAP kinase-specific phosphatase, [Score=92.8, Expect=8e-23]} {Celegans: WBGene00021867, Y54F10BM.13, [RH, Score=109, Expect=4e-29]} {Smed: dd_Smed_v6_6194_0_1, dd_Smed_v6_6194_0_1, [RH, Score=101, Expect=3e-26]} {RNA1509_33875} {RNA1310_14755} {RNA815_23141}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43420

668

13.92

Mlig455_069408

Neo: -

Age: -

AP3B2

1.000

MligTC455_43419

1152

Mlig455_005707, Mlig455_008640

Neo: -

Age: -

AP3B2

4.744

0.946

0.989

0.936

0.896

0.977

Mlig455_005707 {REF} {Length: 5083} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=471.3]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=73.6]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.9]; HEAT repeats [PF13646.8, score=38.2]; HEAT repeat [PF02985.24, score=29.0]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=731, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=709, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=733, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=709, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [Score=392, Expect=4e-119]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=553, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=766, Expect=0.0]} {RNA1509_40349, RNA1509_46125} {RNA1310_3729, RNA1509_40349, RNA1509_46125} {RNA1509_40349, RNA1509_46125, RNA815_1070}

Mlig455_008640 {REF} {Length: 5205} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=468.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=72.4]; Clathrin-adaptor complex-3 beta-1 subunit C-terminal [PF14796.8, score=41.9]; HEAT repeats [PF13646.8, score=38.5]; HEAT repeat [PF02985.24, score=28.0]} {Human: ENSG00000103723, AP3B2, adaptor related protein complex 3 subunit beta 2, [RH, Score=728, Expect=0.0]; ENSG00000132842, AP3B1, adaptor related protein complex 3 subunit beta 1, [RH, Score=707, Expect=0.0]} {Mouse: ENSMUSG00000062444, Ap3b2, adaptor-related protein complex 3, beta 2 subunit, [RH, Score=731, Expect=0.0]; ENSMUSG00000021686, Ap3b1, adaptor-related protein complex 3, beta 1 subunit, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0003210, rb, ruby, [Score=392, Expect=6e-119]} {Celegans: WBGene00000163, apb-3, AP-3 complex subunit beta, [RH, Score=550, Expect=0.0]} {Smed: dd_Smed_v6_1978_0_1, dd_Smed_v6_1978_0_1, [RH, Score=764, Expect=0.0]} {RNA1509_6175} {RNA1310_3729} {RNA815_1070}

MligTC455_16811

599

12.47

Mlig455_063056

Neo: -

Age: -

Region-enriched R5: 1.301/0.00052

DUSP19

0.955

Mlig455_063056 {REF} {Length: 1721} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=80.8]} {Human: ENSG00000162999, DUSP19, dual specificity phosphatase 19, [Score=105, Expect=3e-27]} {Mouse: ENSMUSG00000027001, Dusp19, dual specificity phosphatase 19, [Score=102, Expect=4e-26]} {Dmel: FBgn0083992, Mkp, MAP kinase-specific phosphatase, [Score=92.8, Expect=8e-23]} {Celegans: WBGene00021867, Y54F10BM.13, [RH, Score=109, Expect=4e-29]} {Smed: dd_Smed_v6_6194_0_1, dd_Smed_v6_6194_0_1, [RH, Score=101, Expect=3e-26]} {RNA1509_33875} {RNA1310_14755} {RNA815_23141}