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Results for MligTC455_43425

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43425 1147 23.89 Mlig455_012984

Neo: -

Age: logFC(26M/2M)=0.451

 Mlig455_012984 {REF} {Length: 1862} {Pfam: Delta serrate ligand [PF01414.21, score=34.7]} {RNA1509_12059} {RNA1310_5124.1, RNA1509_12059} {RNA1509_12059, RNA815_6104.1}

Cumulative graph for MligTC455_43425

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.8 4.723 0.44516 1.00000
RegionR2 -0.141 4.723 0.75786 1.00000
RegionR3 0.22 4.723 0.55823 1.00000
RegionR4 -0.057 4.723 0.90370 1.00000
RegionR5 -0.726 4.723 0.07282 0.24484
RegionR6 0.445 4.723 0.23880 0.82284
RegionR7 0.881 4.723 0.03717 0.36848
RegionR8 0.178 4.723 0.74402 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.14 4.723 0.92469 1.00000
RegenerationR2 0.483 4.723 0.24175 0.68964
RegenerationR3 0.328 4.723 0.45718 0.83628
RegenerationR4 1.211 4.723 0.00959 0.14786
RegenerationR5 0.581 4.723 0.19874 0.63132
RegenerationR6 0.402 4.723 0.36256 0.70678
RegenerationBL -0.742 4.723 0.13231 0.43368
RegenerationTP 0.204 4.723 0.67689 1.00000


Genes with expression patterns similar to MligTC455_43425

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43425 1147 23.89 Mlig455_012984

Neo: -

Age: logFC(26M/2M)=0.451

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_012984 {REF} {Length: 1862} {Pfam: Delta serrate ligand [PF01414.21, score=34.7]} {RNA1509_12059} {RNA1310_5124.1, RNA1509_12059} {RNA1509_12059, RNA815_6104.1}
2. MligTC455_52502 67 1.4 Mlig455_006483

Neo: -

Age: -

 0.972 0.972 - - - - - Mlig455_006483 {REF} {Length: 1692} {RNA1509_9393} {RNA1310_41685} {RNA815_34926}
3. MligTC455_17309 119 2.48 Mlig455_045358

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.461

 0.961 0.961 - - - - - Mlig455_045358 {REF} {Length: 2422} {Smed: dd_Smed_v6_17523_0_1, dd_Smed_v6_17523_0_1, [Score=62.8, Expect=3e-12]} {RNA1310_22111} {RNA815_10307}
4. MligTC455_38369 100 2.08 Mlig455_026465

Neo: -

Age: -

 SSUH2 0.958 0.958 - - - - - Mlig455_026465 {REF} {Length: 1913} {Human: ENSG00000125046, SSUH2, ssu-2 homolog (C. elegans), [RH, Score=238, Expect=2e-74]} {Mouse: ENSMUSG00000034387, Ssu2, ssu-2 homolog (C. elegans), [RH, Score=200, Expect=2e-60]} {Celegans: WBGene00013455, ssu-2, Suppressor of Stomatin mutant Uncoordination, [Score=122, Expect=4e-31]} {RNA1509_6425} {RNA1310_32434} {RNA815_16161}
5. MligTC455_48060 1906 39.72 Mlig455_035503

Neo: -

Age: -

 METTL25 0.956 - - - 0.956 - - Mlig455_035503 {REF} {Length: 2342} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13679.8, score=95.0]} {Human: ENSG00000127720, METTL25, methyltransferase like 25, [RH, Score=148, Expect=9e-38]} {Mouse: ENSMUSG00000036009, Mettl25, methyltransferase like 25, [RH, Score=148, Expect=5e-38]} {Dmel: FBgn0053964, CG33964, [RH, Score=169, Expect=2e-46]} {Celegans: WBGene00009123, F25H2.12, [Score=82.4, Expect=1e-16]} {Smed: dd_Smed_v6_8481_0_1, dd_Smed_v6_8481_0_1, [RH, Score=253, Expect=5e-78]} {RNA1509_55706, RNA1509_7183} {RNA1310_9805, RNA1509_55706, RNA1509_7183} {RNA1509_55706, RNA1509_7183, RNA815_3309.1}
6. MligTC455_50296 55 1.15 Mlig455_051593

Neo: -

Age: Up-Down-Up

 0.956 0.956 - - - - - Mlig455_051593 {REF} {Length: 2388} {RNA1310_48051} {RNA815_14784}
7. MligTC455_26164 170 3.54 Mlig455_013776

Neo: -

Age: -

 0.955 0.955 - - - - - Mlig455_013776 {REF} {Length: 1666} {RNA1509_56028} {RNA1310_25129} {RNA815_10685.1}
8. MligTC455_34704 1552 32.34 Mlig455_031185

Neo: Int S/G2/M

Age: -

Regeneration-upregulated R6: 1.344

Regeneration-enriched R6: 1.344

 AGO2 0.954 - - - 0.954 - - Mlig455_031185 {REF} {Length: 4225} {Pfam: Piwi domain [PF02171.19, score=368.8]; Mid domain of argonaute [PF16487.7, score=116.1]; N-terminal domain of argonaute [PF16486.7, score=101.7]; Argonaute linker 1 domain [PF08699.12, score=82.0]; PAZ domain [PF02170.24, score=79.7]; Argonaute linker 2 domain [PF16488.7, score=47.2]} {Human: ENSG00000123908, AGO2, argonaute 2, RISC catalytic component, [RH, Score=1269, Expect=0.0]; ENSG00000092847, AGO1, argonaute 1, RISC catalytic component, [RH, Score=1256, Expect=0.0]; ENSG00000126070, AGO3, argonaute 3, RISC catalytic component, [RH, Score=1240, Expect=0.0]; ENSG00000134698, AGO4, argonaute 4, RISC catalytic component, [RH, Score=1229, Expect=0.0]} {Mouse: ENSMUSG00000036698, Ago2, argonaute RISC catalytic subunit 2, [RH, Score=1273, Expect=0.0]; ENSMUSG00000041530, Ago1, argonaute RISC catalytic subunit 1, [RH, Score=1256, Expect=0.0]; ENSMUSG00000028842, Ago3, argonaute RISC catalytic subunit 3, [RH, Score=1239, Expect=0.0]; ENSMUSG00000042500, Ago4, argonaute RISC catalytic subunit 4, [RH, Score=1223, Expect=0.0]} {Dmel: FBgn0262739, AGO1, Argonaute-1, [RH, Score=1340, Expect=0.0]} {Celegans: WBGene00000105, alg-1, Argonaute-like, [RH, Score=1263, Expect=0.0]} {Smed: dd_Smed_v6_3861_0_1, dd_Smed_v6_3861_0_1, [RH, Score=1462, Expect=0.0]} {RNA1509_13631, RNA1509_44759} {RNA1310_5095, RNA1509_44759} {RNA1509_44759, RNA815_1509.1}
9. MligTC455_42211 363 7.57 Mlig455_064966

Neo: -

Age: logFC(26M/2M)=-0.524

 0.953 0.953 - - - - - Mlig455_064966 {REF} {Length: 784} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=121.9]} {Dmel: FBgn0034583, CG10527, [Score=92.0, Expect=7e-23]} {Smed: dd_Smed_v6_766_0_1, dd_Smed_v6_766_0_1, [Score=127, Expect=6e-38]} {RNA1509_43893, RNA1509_58041} {RNA1310_49421, RNA1509_43893, RNA1509_58041} {RNA1509_43893, RNA1509_58041, RNA815_24671}
10. MligTC455_18005 30 0.63 Mlig455_035220

Neo: -

Age: -

Region-enriched R2: 5.081/0.04369

 0.952 0.952 - - - - - Mlig455_035220 {REF} {Length: 2726} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=112.3]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=62.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.1]} {Dmel: FBgn0033579, CG13229, [Score=109, Expect=6e-26]} {Celegans: WBGene00021275, dmsr-2, DroMyoSuppressin Receptor related, [Score=117, Expect=5e-29]} {Smed: dd_Smed_v6_24203_0_1, dd_Smed_v6_24203_0_1, [Score=185, Expect=2e-54]} {RNA1509_7047} {RNA1310_22990.1} {RNA815_12800}
11. MligTC455_42085 234 4.88 Mlig455_003456

Neo: -

Age: -

 KIRREL1 0.952 0.952 - - - - - Mlig455_003456 {REF} {Length: 3845} {TRANSSPLICED} {Pfam: Immunoglobulin domain [PF13927.8, score=111.2]; Immunoglobulin I-set domain [PF07679.18, score=85.2]; Immunoglobulin domain [PF13895.8, score=72.1]; Immunoglobulin domain [PF00047.27, score=68.2]; Immunoglobulin V-set domain [PF07686.19, score=40.7]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=26.0]} {Human: ENSG00000183853, KIRREL1, kirre like nephrin family adhesion molecule 1, [RH, Score=117, Expect=2e-26]; ENSG00000149571, KIRREL3, kirre like nephrin family adhesion molecule 3, [RH, Score=115, Expect=1e-25]} {Mouse: ENSMUSG00000032036, Kirrel3, kirre like nephrin family adhesion molecule 3, [RH, Score=117, Expect=2e-26]; ENSMUSG00000041734, Kirrel, kirre like nephrin family adhesion molecule 1, [RH, Score=116, Expect=5e-26]} {Dmel: FBgn0085420, DIP-delta, Dpr-interacting protein delta, [Score=60.8, Expect=3e-09]} {Celegans: WBGene00006365, syg-1, Synaptogenesis protein syg-1, [RH, Score=99.8, Expect=3e-21]} {Smed: dd_Smed_v6_12118_0_1, dd_Smed_v6_12118_0_1, [RH, Score=226, Expect=8e-62]} {RNA1509_42885} {RNA1310_3333, RNA1509_42885} {RNA1509_42885, RNA815_3466}
12. MligTC455_48324 1746 36.38 Mlig455_058196

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.604

Region-enriched R3: 5.386/0.00000

 ZAN 0.952 0.952 - - - - - Mlig455_058196 {REF} {Length: 2399} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=150, Expect=3e-37]} {Mouse: ENSMUSG00000049008, BB014433, expressed sequence BB014433, [Score=67.0, Expect=2e-11]; ENSMUSG00000079173, Zan, zonadhesin, [Score=63.9, Expect=5e-10]} {Dmel: FBgn0034294, Muc55B, Mucin 55B, [Score=109, Expect=6e-25]} {RNA1509_27445} {RNA1310_7841} {RNA815_14882.1}
13. MligTC455_11699 122 2.54 Mlig455_055861

Neo: -

Age: -

Region-enriched R2: 11.336/0.00038

Regeneration-downregulated R2: -9.399

Regeneration-depleted R2: -9.399

 0.951 0.951 - - - - - Mlig455_055861 {REF} {Length: 601} {RNA1509_1258} {RNA1310_120080} {RNA815_53081}
14. MligTC455_41161 1723 35.89 Mlig455_015003, Mlig455_038650

Neo: -

Age: -

Regeneration-upregulated R6: 1.721

Regeneration-enriched R6: 1.721

 RBBP6 0.95 - - - 0.950 - -

Mlig455_015003 {REF} {Length: 3795} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.9]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=78.2, Expect=5e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=96.3, Expect=9e-20]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.6, Expect=3e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [Score=80.1, Expect=3e-15]} {RNA1509_48313, RNA1509_5537} {RNA1310_2775, RNA1509_48313} {RNA1509_48313, RNA815_5708}

Mlig455_038650 {REF} {Length: 3834} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; Ring finger domain [PF13639.8, score=21.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.9, Expect=1e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=80.5, Expect=9e-15]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=62.0, Expect=2e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [RH, Score=85.9, Expect=4e-17]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708}

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