Data search
Results for MligTC455_43460
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43460 | 446 | 9.29 | Mlig455_046283 | Neo: - Age: Up-Down-Up |
PIEZO2 | Mlig455_046283 {REF} {Length: 10477} {TRANSSPLICED} {Pfam: Piezo non-specific cation channel, R-Ras-binding domain [PF12166.10, score=298.5]; Piezo [PF15917.7, score=72.7]} {Human: ENSG00000154864, PIEZO2, piezo type mechanosensitive ion channel component 2, [RH, Score=376, Expect=9e-104]} {Mouse: ENSMUSG00000041482, Piezo2, piezo-type mechanosensitive ion channel component 2, [RH, Score=366, Expect=7e-101]} {Dmel: FBgn0264953, Piezo, [Score=334, Expect=2e-91]} {Celegans: WBGene00007505, pezo-1, Piezo-type mechanosensitive ion channel component, [Score=251, Expect=1e-67]} {Smed: dd_Smed_v6_7182_0_3, dd_Smed_v6_7182_0_3, [Score=382, Expect=3e-106]} {RNA1509_3425} {RNA1310_345} {RNA815_7533} |
Cumulative graph for MligTC455_43460
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.433 | 3.679 | 0.74274 | 1.00000 | |
| RegionR2 | 0.446 | 3.679 | 0.41700 | 0.80943 | |
| RegionR3 | -0.549 | 3.679 | 0.25425 | 0.79791 | |
| RegionR4 | 1.072 | 3.679 | 0.04173 | 0.17038 | |
| RegionR5 | 0.047 | 3.679 | 0.90911 | 1.00000 | |
| RegionR6 | -0.19 | 3.679 | 0.68932 | 1.00000 | |
| RegionR7 | 0.586 | 3.679 | 0.26068 | 0.88806 | |
| RegionR8 | -0.98 | 3.679 | 0.22105 | 0.82863 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.338 | 3.679 | 0.17967 | 0.92232 | |
| RegenerationR2 | -0.48 | 3.679 | 0.28029 | 0.72415 | |
| RegenerationR3 | 0.528 | 3.679 | 0.30817 | 0.73901 | |
| RegenerationR4 | -0.824 | 3.679 | 0.10859 | 0.50770 | |
| RegenerationR5 | -0.048 | 3.679 | 0.91806 | 1.00000 | |
| RegenerationR6 | -0.081 | 3.679 | 0.87679 | 1.00000 | |
| RegenerationBL | -0.625 | 3.679 | 0.36778 | 0.73615 | |
| RegenerationTP | -1.452 | 3.679 | 0.07402 | 0.43570 |
Genes with expression patterns similar to MligTC455_43460
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43460 | 446 | 9.29 | Mlig455_046283 | Neo: - Age: Up-Down-Up |
PIEZO2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_046283 {REF} {Length: 10477} {TRANSSPLICED} {Pfam: Piezo non-specific cation channel, R-Ras-binding domain [PF12166.10, score=298.5]; Piezo [PF15917.7, score=72.7]} {Human: ENSG00000154864, PIEZO2, piezo type mechanosensitive ion channel component 2, [RH, Score=376, Expect=9e-104]} {Mouse: ENSMUSG00000041482, Piezo2, piezo-type mechanosensitive ion channel component 2, [RH, Score=366, Expect=7e-101]} {Dmel: FBgn0264953, Piezo, [Score=334, Expect=2e-91]} {Celegans: WBGene00007505, pezo-1, Piezo-type mechanosensitive ion channel component, [Score=251, Expect=1e-67]} {Smed: dd_Smed_v6_7182_0_3, dd_Smed_v6_7182_0_3, [Score=382, Expect=3e-106]} {RNA1509_3425} {RNA1310_345} {RNA815_7533} |
| 2. | MligTC455_43461 | 412 | 8.59 | Mlig455_061539 | Neo: - Age: - |
5.832 | 0.982 | 0.986 | 0.888 | 0.999 | 0.981 | 0.996 | Mlig455_061539 {REF} {Length: 801} {NoTransDecoderORF} {RNA1509_3425} {RNA1310_41219.1} {RNA815_19296.1} | |
| 3. | MligTC455_29447 | 479 | 9.98 | Mlig455_012318 | Neo: - Age: - |
MSRB2 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_012318 {REF} {Length: 1050} {TRANSSPLICED} {Pfam: SelR domain [PF01641.20, score=158.7]} {Human: ENSG00000148450, MSRB2, methionine sulfoxide reductase B2, [Score=133, Expect=6e-39]} {Mouse: ENSMUSG00000023094, Msrb2, methionine sulfoxide reductase B2, [Score=132, Expect=6e-39]} {Dmel: FBgn0267376, SelR, Selenoprotein R, [Score=118, Expect=9e-34]} {Celegans: WBGene00018419, F44E2.6, [Score=143, Expect=1e-43]} {Smed: dd_Smed_v6_1344_0_1, dd_Smed_v6_1344_0_1, [Score=115, Expect=3e-33]} {RNA1509_16560, RNA1509_26721, RNA1509_35436, RNA1509_46861} {RNA1310_38779, RNA1509_26721, RNA1509_35436, RNA1509_46861} {RNA1509_26721, RNA1509_35436, RNA1509_46861, RNA815_18708} |
| 4. | MligTC455_38454 | 837 | 17.44 | Mlig455_044385 | Neo: - Age: - |
NPC1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_044385 {REF} {Length: 5388} {Pfam: Patched family [PF02460.20, score=275.0]; Niemann-Pick C1 N terminus [PF16414.7, score=206.8]; Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=173.3]; MMPL family [PF03176.17, score=25.3]} {Human: ENSG00000141458, NPC1, NPC intracellular cholesterol transporter 1, [RH, Score=1039, Expect=0.0]} {Mouse: ENSMUSG00000024413, Npc1, NPC intracellular cholesterol transporter 1, [RH, Score=1021, Expect=0.0]} {Dmel: FBgn0024320, Npc1a, Niemann-Pick type C-1a, [RH, Score=959, Expect=0.0]} {Celegans: WBGene00003561, ncr-1, Niemann-Pick C1 protein homolog 1, [Score=505, Expect=9e-156]} {Smed: dd_Smed_v6_5175_0_1, dd_Smed_v6_5175_0_1, [RH, Score=1048, Expect=0.0]} {RNA1509_2275} {RNA1310_1514.1, RNA1509_2275} {RNA1509_2275, RNA815_976} |
Berezikov Lab - 2020-2021 © ERIBA