TomoSeq data search

Data search

Results for MligTC455_43511

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43511

380

7.92

Mlig455_009947

Neo: -

Age: -

CHAC2

Mlig455_009947 {REF} {Length: 1705} {TRANSSPLICED} {Pfam: ChaC-like protein [PF04752.14, score=180.8]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [RH, Score=174, Expect=4e-55]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [RH, Score=175, Expect=1e-55]} {Dmel: FBgn0030411, CG2540, [RH, Score=146, Expect=4e-43]} {Celegans: WBGene00017724, F22F7.7, Gamma-glutamylcyclotransferase, [Score=105, Expect=9e-29]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=116, Expect=2e-32]} {RNA1509_30973} {RNA1310_15716.1} {RNA815_23036}

Cumulative graph for MligTC455_43511

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.775	3.477	0.51888	1.00000
RegionR2	0.514	3.477	0.35319	0.74690
RegionR3	-0.22	3.477	0.62047	1.00000
RegionR4	0.77	3.477	0.15127	0.40191
RegionR5	0.418	3.477	0.27588	0.60224
RegionR6	0.038	3.477	0.93308	1.00000
RegionR7	-0.815	3.477	0.19493	0.80133
RegionR8	-1.48	3.477	0.07142	0.51141

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-6.111	3.477	0.18792	0.92780
RegenerationR2	-0.497	3.477	0.28284	0.72626
RegenerationR3	0.114	3.477	0.83446	0.99224
RegenerationR4	-0.521	3.477	0.32756	0.76338
RegenerationR5	0.323	3.477	0.48070	0.84686
RegenerationR6	-0.582	3.477	0.31374	0.66140
RegenerationBL	0.276	3.477	0.73733	1.00000
RegenerationTP	1.205	3.477	0.10643	0.50466

Genes with expression patterns similar to MligTC455_43511

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43511	380	7.92	Mlig455_009947	Neo: - Age: -	CHAC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_009947 {REF} {Length: 1705} {TRANSSPLICED} {Pfam: ChaC-like protein [PF04752.14, score=180.8]} {Human: ENSG00000143942, CHAC2, ChaC cation transport regulator homolog 2, [RH, Score=174, Expect=4e-55]} {Mouse: ENSMUSG00000020309, Chac2, ChaC, cation transport regulator 2, [RH, Score=175, Expect=1e-55]} {Dmel: FBgn0030411, CG2540, [RH, Score=146, Expect=4e-43]} {Celegans: WBGene00017724, F22F7.7, Gamma-glutamylcyclotransferase, [Score=105, Expect=9e-29]} {Smed: dd_Smed_v6_2439_0_1, dd_Smed_v6_2439_0_1, [Score=116, Expect=2e-32]} {RNA1509_30973} {RNA1310_15716.1} {RNA815_23036}
2.	MligTC455_32656	400	8.34	Mlig455_068433	Neo: Irradiation Age: - Region-enriched R5: 2.959/0.00001		0.97	-	-	-	0.970	-	-	Mlig455_068433 {REF} {Length: 2422} {TRANSSPLICED} {RNA1509_14921, RNA1509_47892, RNA1509_55323} {RNA1310_9315.1, RNA1509_14921, RNA1509_47892, RNA1509_55323} {RNA1509_14921, RNA1509_47892, RNA1509_55323, RNA815_3200.1}
3.	MligTC455_49388	272	5.67	Mlig455_068080	Neo: - Age: Down-Up-Down		0.955	-	-	-	-	-	0.955	Mlig455_068080 {REF} {Length: 2128} {TRANSSPLICED} {RNA1509_20057, RNA1509_55332} {RNA1310_13070.1, RNA1509_20057, RNA1509_55332} {RNA1509_20057, RNA1509_55332, RNA815_13084}
4.	MligTC455_22514	24931	519.4	Mlig455_017095	Neo: Int S/G2/M Age: Down-Down-Up, logFC(26M/2M)=0.197	RPL23	0.953	-	-	-	0.953	-	-	Mlig455_017095 {REF} {Length: 572} {TRANSSPLICED} {Pfam: Ribosomal protein L14p/L23e [PF00238.21, score=112.4]} {Human: ENSG00000125691, RPL23, ribosomal protein L23, [RH, Score=199, Expect=9e-67]} {Mouse: ENSMUSG00000071415, Rpl23, ribosomal protein L23, [RH, Score=199, Expect=6e-67]} {Dmel: FBgn0010078, RpL23, Ribosomal protein L23, [RH, Score=198, Expect=1e-66]} {Celegans: WBGene00004435, rpl-23, 60S ribosomal protein L23, [RH, Score=199, Expect=5e-67]} {Smed: dd_Smed_v6_96895_0_1, dd_Smed_v6_96895_0_1, [RH, Score=189, Expect=2e-63]} {RNA1509_14657, RNA1509_316, RNA1509_7289} {RNA1310_61110, RNA1509_14657, RNA1509_316, RNA1509_7289} {RNA1509_14657, RNA1509_316, RNA1509_7289, RNA815_31869}

Berezikov Lab - 2020-2021 © ERIBA