TomoSeq data search

Data search

Results for MligTC455_43529

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43529

46

0.95

Mlig455_071116

Neo: -

Age: -

Region-enriched R4: 7.153/0.00184
Region-enriched R5: 4.048/0.02373

Mlig455_071116 {REF} {Length: 737} {Pfam: Pancreatic hormone peptide [PF00159.20, score=37.4]} {RNA1509_36078} {RNA1310_43859} {RNA815_26881}

Cumulative graph for MligTC455_43529

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.298	1.158	1.00000	1.00000
RegionR2	-1.128	1.158	0.92374	1.00000
RegionR3	-0.808	1.158	0.90173	1.00000
RegionR4	7.153	1.158	0.00012	0.00184
RegionR5	4.048	1.158	0.00302	0.02373
RegionR6	-1.602	1.158	1.00000	1.00000
RegionR7	1.64	1.158	0.26193	0.88948
RegionR8	-2.005	1.158	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	4.031	1.158	1.00000	1.00000
RegenerationR2	-1.403	1.158	0.12217	0.54247
RegenerationR3	-0.09	1.158	0.88541	1.00000
RegenerationR4	-2.391	1.158	0.09963	0.48969
RegenerationR5	-3.744	1.158	0.00568	0.13819
RegenerationR6	0.748	1.158	0.51402	0.81614
RegenerationBL	-0.736	1.158	0.80814	1.00000
RegenerationTP	-4.73	1.158	1.00000	1.00000

Genes with expression patterns similar to MligTC455_43529

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43529	46	0.95	Mlig455_071116	Neo: - Age: - Region-enriched R4: 7.153/0.00184 Region-enriched R5: 4.048/0.02373		3	-	-	1.000	1.000	-	1.000	Mlig455_071116 {REF} {Length: 737} {Pfam: Pancreatic hormone peptide [PF00159.20, score=37.4]} {RNA1509_36078} {RNA1310_43859} {RNA815_26881}
2.	MligTC455_48400	43	0.89	Mlig455_041707	Neo: - Age: Up-Down-Up	NOTCH2	0.964	-	-	-	-	-	0.964	Mlig455_041707 {REF} {Length: 5304} {Pfam: EGF-like domain [PF00008.29, score=130.8]; LNR domain [PF00066.19, score=92.2]; Human growth factor-like EGF [PF12661.9, score=79.8]; Calcium-binding EGF domain [PF07645.17, score=46.8]; EGF-like domain [PF07974.15, score=21.5]; NOTCH protein [PF07684.14, score=20.9]; Transcriptional activator LAG-3 [PF11498.10, score=20.2]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=285, Expect=1e-78]; ENSG00000148400, NOTCH1, notch 1, [Score=280, Expect=4e-77]; ENSG00000074181, NOTCH3, notch 3, [Score=273, Expect=7e-75]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=288, Expect=5e-80]; ENSMUSG00000038146, Notch3, notch 3, [Score=285, Expect=6e-79]; ENSMUSG00000027878, Notch2, notch 2, [Score=283, Expect=4e-78]} {Dmel: FBgn0004647, N, Notch, [Score=269, Expect=1e-73]} {Celegans: WBGene00003001, lin-12, [RH, Score=229, Expect=3e-61]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=267, Expect=2e-73]} {RNA1310_37322} {RNA815_20315}
3.	MligTC455_46326	69	1.43	Mlig455_034184	Neo: - Age: Up-Down-Down	MAP3K19	0.963	-	-	-	-	-	0.963	Mlig455_034184 {REF} {Length: 3487} {Pfam: Protein kinase domain [PF00069.27, score=182.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=109.0]; Ankyrin repeats (3 copies) [PF12796.9, score=43.0]; Ankyrin repeats (many copies) [PF13857.8, score=34.7]; Ankyrin repeats (many copies) [PF13637.8, score=31.8]; Ankyrin repeat [PF00023.32, score=28.4]; Ankyrin repeat [PF13606.8, score=25.0]; Mucin-like [PF16058.7, score=23.8]; Phosphotransferase enzyme family [PF01636.25, score=21.5]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=249, Expect=3e-69]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=247, Expect=1e-68]} {Dmel: FBgn0261456, hpo, hippo, [Score=149, Expect=2e-37]} {Celegans: WBGene00016038, cst-2, Caenorhabditis STE20-like kinase, [Score=151, Expect=2e-39]} {Smed: dd_Smed_v6_10339_0_1, dd_Smed_v6_10339_0_1, [Score=233, Expect=4e-65]} {RNA1310_17463} {RNA815_35639}
4.	MligTC455_14185	59	1.23	Mlig455_049747	Neo: - Age: Down-Up-Down		0.962	-	-	-	-	-	0.962	Mlig455_049747 {REF} {Length: 1185} {RNA1310_45179} {RNA815_26547}
5.	MligTC455_19645	202	4.22	Mlig455_014758	Neo: - Age: Down-Up-Down		0.961	-	-	-	0.961	-	-	Mlig455_014758 {REF} {Length: 2447} {RNA1310_18210.1} {RNA815_24589}
6.	MligTC455_14958	12	0.26	Mlig455_069448	Neo: - Age: -		0.957	-	-	-	-	-	0.957	Mlig455_069448 {REF} {Length: 899} {Smed: dd_Smed_v6_9265_0_1, dd_Smed_v6_9265_0_1, [Score=97.4, Expect=9e-24]} {RNA1310_70933}
7.	MligTC455_19100	15	0.31	Mlig455_025252	Neo: - Age: -	DAXX	0.954	-	-	-	-	-	0.954	Mlig455_025252 {REF} {Length: 4813} {TRANSSPLICED} {Human: ENSG00000231617, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000227046, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000204209, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000206206, DAXX, death domain associated protein, [Score=108, Expect=2e-23]; ENSG00000206279, DAXX, death domain associated protein, [Score=108, Expect=2e-23]} {Mouse: ENSMUSG00000002307, Daxx, Fas death domain-associated protein, [Score=113, Expect=2e-25]} {Dmel: FBgn0031820, Daxx, Daxx-like protein, [Score=80.1, Expect=7e-15]} {Smed: dd_Smed_v6_12059_0_6, dd_Smed_v6_12059_0_6, [RH, Score=113, Expect=5e-26]} {RNA1509_25153} {RNA1310_7064.1} {RNA815_18101}
8.	MligTC455_44119	177	3.68	Mlig455_002837	Neo: Irradiation Age: - Region-enriched R4: 2.820/0.01591 Region-enriched R5: 2.674/0.02121	TENT2	0.95	-	-	-	0.950	-	-	Mlig455_002837 {REF} {Length: 1389} {TRANSSPLICED} {Pfam: Cid1 family poly A polymerase [PF03828.21, score=40.5]; TUTase nucleotidyltransferase domain [PF19088.2, score=35.2]} {Human: ENSG00000164329, TENT2, terminal nucleotidyltransferase 2, [Score=136, Expect=4e-37]} {Mouse: ENSMUSG00000042167, Tent2, terminal nucleotidyltransferase 2, [Score=133, Expect=5e-36]} {Dmel: FBgn0260780, wisp, wispy, [Score=150, Expect=3e-41]} {Celegans: WBGene00009284, F31C3.2, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_28587_0_1, dd_Smed_v6_28587_0_1, [Score=237, Expect=4e-72]} {RNA1509_5760} {RNA1310_11641} {RNA815_6053}

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