TomoSeq data search

Data search

Results for MligTC455_43552

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43552	369	7.68	Mlig455_031370	Neo: - Age: -		Mlig455_031370 {REF} {Length: 940} {RNA1509_50642} {RNA1310_38007} {RNA815_19648}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43552

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.958	3.413	0.14470	0.75704
RegionR2	1.565	3.413	0.07273	0.32903
RegionR3	0.987	3.413	0.25739	0.80158
RegionR4	0.745	3.413	0.46012	0.78807
RegionR5	0.43	3.413	0.63177	0.98496
RegionR6	1.629	3.413	0.03443	0.34443
RegionR7	1.823	3.413	0.03103	0.33521
RegionR8	-1.221	3.413	0.99272	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.385	3.413	0.99997	1.00000
RegenerationR2	-0.237	3.413	0.65668	0.93937
RegenerationR3	0.54	3.413	0.36028	0.77686
RegenerationR4	-0.258	3.413	0.69522	0.95185
RegenerationR5	0.034	3.413	0.95099	1.00000
RegenerationR6	0.175	3.413	0.76000	0.95683
RegenerationBL	0.25	3.413	0.73818	1.00000
RegenerationTP	1.152	3.413	0.17581	0.60949

Genes with expression patterns similar to MligTC455_43552

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43552	369	7.68	Mlig455_031370	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031370 {REF} {Length: 940} {RNA1509_50642} {RNA1310_38007} {RNA815_19648}
2.	MligTC455_52808	206	4.3	Mlig455_031875	Neo: - Age: -	TRPM3	0.963	-	-	-	0.963	-	-	Mlig455_031875 {REF} {Length: 4103} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=109.3]; Ankyrin repeats (many copies) [PF13637.8, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=87.4]; Ankyrin repeat [PF13606.8, score=68.6]; Ankyrin repeat [PF00023.32, score=66.6]; Ion transport protein [PF00520.33, score=52.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=142, Expect=9e-34]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=140, Expect=7e-33]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=140, Expect=7e-33]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=147, Expect=4e-35]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=140, Expect=6e-33]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=99.4, Expect=2e-20]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=89.4, Expect=1e-17]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=211, Expect=8e-56]} {RNA1509_27191} {RNA1310_2426, RNA1509_27191} {RNA1509_27191, RNA815_1926}
3.	MligTC455_38993	26417	550.35	Mlig455_033850, Mlig455_033866	Neo: - Age: - Region-enriched R7: 2.780/0.00000 Region-enriched R6: 1.604/0.03277 Regeneration-downregulated BL: -2.507 Regeneration-depleted BL: -2.507		0.956	-	-	-	0.956	-	-	Mlig455_033850 {REF} {Length: 1214} {RNA1509_35790, RNA1509_4103} {RNA1310_83034, RNA1509_4103} {RNA1509_4103, RNA815_21458.1} Mlig455_033866 {REF} {Length: 1213} {RNA1509_17959, RNA1509_25065, RNA1509_35790, RNA1509_56573} {RNA1310_83034, RNA1509_17959, RNA1509_25065, RNA1509_56573} {RNA1509_17959, RNA1509_25065, RNA1509_56573, RNA815_21458.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43552

369

7.68

Mlig455_031370

Neo: -

Age: -

1.000

Mlig455_031370 {REF} {Length: 940} {RNA1509_50642} {RNA1310_38007} {RNA815_19648}

MligTC455_52808

206

4.3

Mlig455_031875

Neo: -

Age: -

TRPM3

0.963

Mlig455_031875 {REF} {Length: 4103} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=109.3]; Ankyrin repeats (many copies) [PF13637.8, score=88.9]; Ankyrin repeats (many copies) [PF13857.8, score=87.4]; Ankyrin repeat [PF13606.8, score=68.6]; Ankyrin repeat [PF00023.32, score=66.6]; Ion transport protein [PF00520.33, score=52.7]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=142, Expect=9e-34]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=140, Expect=7e-33]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=140, Expect=7e-33]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=147, Expect=4e-35]; ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=140, Expect=6e-33]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=99.4, Expect=2e-20]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=89.4, Expect=1e-17]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=211, Expect=8e-56]} {RNA1509_27191} {RNA1310_2426, RNA1509_27191} {RNA1509_27191, RNA815_1926}

MligTC455_38993

26417

550.35

Mlig455_033850, Mlig455_033866

Neo: -

Age: -

Region-enriched R7: 2.780/0.00000
Region-enriched R6: 1.604/0.03277

Regeneration-downregulated BL: -2.507

Regeneration-depleted BL: -2.507

0.956

Mlig455_033850 {REF} {Length: 1214} {RNA1509_35790, RNA1509_4103} {RNA1310_83034, RNA1509_4103} {RNA1509_4103, RNA815_21458.1}

Mlig455_033866 {REF} {Length: 1213} {RNA1509_17959, RNA1509_25065, RNA1509_35790, RNA1509_56573} {RNA1310_83034, RNA1509_17959, RNA1509_25065, RNA1509_56573} {RNA1509_17959, RNA1509_25065, RNA1509_56573, RNA815_21458.1}