Data search


search
Exact
Search

Results for MligTC455_43558

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43558 717 14.95 Mlig455_061073

Neo: -

Age: Up-Up-Down

Mlig455_061073 {REF} {Length: 3031} {TRANSSPLICED} {Dmel: FBgn0044823, Spec2, [RH, Score=47.0, Expect=3e-07]} {RNA1509_8850} {RNA1310_6911, RNA1509_8850} {RNA1509_8850, RNA815_1680}

Cumulative graph for MligTC455_43558

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.343 4.167 0.23708 0.88182
RegionR2 0.114 4.167 0.79327 1.00000
RegionR3 0.083 4.167 0.81631 1.00000
RegionR4 0.028 4.167 0.94561 1.00000
RegionR5 0.701 4.167 0.02410 0.11074
RegionR6 0.285 4.167 0.42447 0.99114
RegionR7 -0.51 4.167 0.31417 0.94894
RegionR8 0.641 4.167 0.20761 0.80862

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.165 4.167 0.19581 0.93505
RegenerationR2 0.153 4.167 0.65166 0.93716
RegenerationR3 0.014 4.167 0.96943 1.00000
RegenerationR4 -0.124 4.167 0.75672 0.97159
RegenerationR5 -0.028 4.167 0.93589 1.00000
RegenerationR6 0.007 4.167 0.98500 1.00000
RegenerationBL -0.118 4.167 0.80663 1.00000
RegenerationTP 0.079 4.167 0.87280 1.00000


Genes with expression patterns similar to MligTC455_43558

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43558 717 14.95 Mlig455_061073

Neo: -

Age: Up-Up-Down

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_061073 {REF} {Length: 3031} {TRANSSPLICED} {Dmel: FBgn0044823, Spec2, [RH, Score=47.0, Expect=3e-07]} {RNA1509_8850} {RNA1310_6911, RNA1509_8850} {RNA1509_8850, RNA815_1680}
2. MligTC455_43559 681 14.18 Mlig455_061119

Neo: -

Age: Down-Up-Down

5.837 0.997 0.994 0.961 0.976 0.984 0.925 Mlig455_061119 {REF} {Length: 1283} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_8850} {RNA1310_3878} {RNA815_1680}
3. MligTC455_38892 614 12.79 Mlig455_017247

Neo: -

Age: -

STRN3 1.73 - - - 0.767 - 0.963 Mlig455_017247 {REF} {Length: 3566} {Pfam: Striatin family [PF08232.14, score=143.5]; WD domain, G-beta repeat [PF00400.34, score=101.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=31.5]} {Human: ENSG00000196792, STRN3, striatin 3, [RH, Score=506, Expect=3e-169]; ENSG00000115808, STRN, striatin, [RH, Score=504, Expect=2e-169]} {Mouse: ENSMUSG00000020954, Strn3, striatin, calmodulin binding protein 3, [RH, Score=514, Expect=3e-172]} {Dmel: FBgn0044323, Cka, Connector of kinase to AP-1, [RH, Score=349, Expect=2e-109]} {Celegans: WBGene00010631, cash-1, CKA And Striatin Homolog, [Score=423, Expect=6e-139]} {Smed: dd_Smed_v6_10974_0_1, dd_Smed_v6_10974_0_1, [RH, Score=380, Expect=8e-123]} {RNA1509_5874} {RNA1310_3754, RNA1509_5874} {RNA1509_5874, RNA815_9384}
4. MligTC455_48956 428 8.92 Mlig455_053741

Neo: -

Age: -

AGRN 0.962 - - - 0.962 - - Mlig455_053741 {REF} {Length: 2667} {Pfam: Kazal-type serine protease inhibitor domain [PF07648.17, score=139.8]; Kazal-type serine protease inhibitor domain [PF00050.23, score=104.3]} {Human: ENSG00000188157, AGRN, agrin, [Score=142, Expect=2e-35]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [RH, Score=147, Expect=2e-37]} {Dmel: FBgn0052354, CG32354, [Score=70.1, Expect=2e-12]} {Celegans: WBGene00018304, agr-1, AGRin (Synaptic protein) homolog; AGRin (Synaptic protein) homolog family member, [RH, Score=176, Expect=1e-47]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [RH, Score=203, Expect=8e-57]} {RNA1509_15340} {RNA1310_13904.1} {RNA815_7896}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA