Data search
Results for MligTC455_43604
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43604 | 781 | 16.27 | Mlig455_053006 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.400/0.00940 Regeneration-depleted R4: -1.772 |
PIM3 | Mlig455_053006 {REF} {Length: 2546} {Pfam: Protein kinase domain [PF00069.27, score=155.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=52.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.7]} {Human: ENSG00000198355, PIM3, Pim-3 proto-oncogene, serine/threonine kinase, [Score=199, Expect=7e-61]; ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [Score=197, Expect=3e-60]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [Score=198, Expect=8e-61]; ENSMUSG00000035828, Pim3, proviral integration site 3, [Score=196, Expect=6e-60]; ENSMUSG00000031155, Pim2, proviral integration site 2, [Score=191, Expect=2e-57]} {Dmel: FBgn0034950, Pask, PAS kinase, [Score=109, Expect=1e-25]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [Score=182, Expect=2e-53]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [Score=220, Expect=3e-68]} {RNA1509_4423} {RNA1310_9385} {RNA815_6856} |
Cumulative graph for MligTC455_43604
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.206 | 4.399 | 0.83677 | 1.00000 | |
| RegionR2 | -1.51 | 4.399 | 0.00162 | 0.03026 | |
| RegionR3 | 0.056 | 4.399 | 0.87541 | 1.00000 | |
| RegionR4 | 1.4 | 4.399 | 0.00088 | 0.00940 | |
| RegionR5 | 1.383 | 4.399 | 0.00000 | 0.00012 | |
| RegionR6 | 0.428 | 4.399 | 0.22637 | 0.80818 | |
| RegionR7 | -0.52 | 4.399 | 0.28770 | 0.92123 | |
| RegionR8 | -1.443 | 4.399 | 0.04794 | 0.42924 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.21 | 4.399 | 0.02224 | 0.58770 | |
| RegenerationR2 | -0.953 | 4.399 | 0.02438 | 0.25711 | |
| RegenerationR3 | -1.356 | 4.399 | 0.00067 | 0.03942 | |
| RegenerationR4 | -1.772 | 4.399 | 0.00001 | 0.00154 | |
| RegenerationR5 | -1.731 | 4.399 | 0.00000 | 0.00066 | |
| RegenerationR6 | -1.456 | 4.399 | 0.00034 | 0.01858 | |
| RegenerationBL | -0.073 | 4.399 | 0.88962 | 1.00000 | |
| RegenerationTP | -0.602 | 4.399 | 0.36629 | 0.80487 |
Genes with expression patterns similar to MligTC455_43604
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43604 | 781 | 16.27 | Mlig455_053006 | Neo: - Age: Up-Down-Down Region-enriched R4: 1.400/0.00940 Regeneration-depleted R4: -1.772 |
PIM3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_053006 {REF} {Length: 2546} {Pfam: Protein kinase domain [PF00069.27, score=155.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=52.9]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=25.7]} {Human: ENSG00000198355, PIM3, Pim-3 proto-oncogene, serine/threonine kinase, [Score=199, Expect=7e-61]; ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [Score=197, Expect=3e-60]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [Score=198, Expect=8e-61]; ENSMUSG00000035828, Pim3, proviral integration site 3, [Score=196, Expect=6e-60]; ENSMUSG00000031155, Pim2, proviral integration site 2, [Score=191, Expect=2e-57]} {Dmel: FBgn0034950, Pask, PAS kinase, [Score=109, Expect=1e-25]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [Score=182, Expect=2e-53]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [Score=220, Expect=3e-68]} {RNA1509_4423} {RNA1310_9385} {RNA815_6856} |
| 2. | MligTC455_43605 | 498 | 10.38 | Mlig455_053066 | Neo: Int S/G2/M Age: Up-Up-Down Region-enriched R4: 1.454/0.01496 |
PIM3 | 5.407 | 0.811 | 0.883 | 0.898 | 0.929 | 0.950 | 0.936 | Mlig455_053066 {REF} {Length: 2730} {Pfam: Protein kinase domain [PF00069.27, score=195.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=69.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.3]; Kinase-like [PF14531.8, score=23.9]} {Human: ENSG00000198355, PIM3, Pim-3 proto-oncogene, serine/threonine kinase, [Score=255, Expect=4e-82]; ENSG00000137193, PIM1, Pim-1 proto-oncogene, serine/threonine kinase, [Score=252, Expect=4e-81]} {Mouse: ENSMUSG00000024014, Pim1, proviral integration site 1, [Score=253, Expect=9e-82]; ENSMUSG00000035828, Pim3, proviral integration site 3, [Score=251, Expect=5e-81]} {Dmel: FBgn0034950, Pask, PAS kinase, [Score=134, Expect=7e-34]} {Celegans: WBGene00004183, prk-2, Serine/threonine-protein kinase prk-2, [RH, Score=226, Expect=4e-70]} {Smed: dd_Smed_v6_4012_0_1, dd_Smed_v6_4012_0_1, [RH, Score=267, Expect=3e-86]} {RNA1509_4423} {RNA1310_9385} {RNA815_6856} |
| 3. | MligTC455_45603 | 262 | 5.45 | Mlig455_019504 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.784/0.01684 |
GRPEL1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_019504 {REF} {Length: 1282} {TRANSSPLICED} {Pfam: GrpE [PF01025.21, score=155.5]} {Human: ENSG00000109519, GRPEL1, GrpE like 1, mitochondrial, [RH, Score=161, Expect=5e-49]} {Mouse: ENSMUSG00000029198, Grpel1, GrpE-like 1, mitochondrial, [RH, Score=156, Expect=2e-47]} {Dmel: FBgn0014877, Roe1, [RH, Score=162, Expect=5e-50]} {Celegans: WBGene00007927, C34C12.8, GrpE protein homolog, mitochondrial, [RH, Score=137, Expect=7e-40]} {Smed: dd_Smed_v6_1172_0_1, dd_Smed_v6_1172_0_1, [RH, Score=154, Expect=8e-47]} {RNA1509_16786} {RNA1310_25971} {RNA815_10875.1} |
| 4. | MligTC455_43298 | 1464 | 30.5 | Mlig455_038207, Mlig455_038281 | Neo: Int S/G2/M Age: Down-Up-Down |
C2orf69 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_038207 {REF} {Length: 1663} {Pfam: Uncharacterised protein family UPF0565 [PF10561.11, score=197.8]} {Human: ENSG00000178074, C2orf69, chromosome 2 open reading frame 69, [RH, Score=143, Expect=3e-39]} {Mouse: ENSMUSG00000038323, 1700066M21Rik, RIKEN cDNA 1700066M21 gene, [RH, Score=141, Expect=9e-39]} {Dmel: FBgn0051122, CG31122, [RH, Score=97.1, Expect=5e-22]} {Smed: dd_Smed_v6_12694_0_1, dd_Smed_v6_12694_0_1, [RH, Score=121, Expect=2e-32]} {RNA1509_30036} {RNA1310_25143.1} {RNA815_11597} Mlig455_038281 {REF} {Length: 1450} {Pfam: Uncharacterised protein family UPF0565 [PF10561.11, score=197.8]} {Human: ENSG00000178074, C2orf69, chromosome 2 open reading frame 69, [RH, Score=142, Expect=6e-39]} {Mouse: ENSMUSG00000038323, 1700066M21Rik, RIKEN cDNA 1700066M21 gene, [RH, Score=143, Expect=2e-39]} {Dmel: FBgn0051122, CG31122, [RH, Score=96.7, Expect=7e-22]} {Smed: dd_Smed_v6_12694_0_1, dd_Smed_v6_12694_0_1, [RH, Score=122, Expect=7e-33]} {RNA1509_30036} {RNA1310_25143.1, RNA1509_30036} {RNA1509_30036, RNA815_11597} |
Berezikov Lab - 2020-2021 © ERIBA