M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_43625

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43625 444 9.25 Mlig455_035948

Neo: -

Age: -

 WASHC5 Mlig455_035948 {REF} {Length: 4282} {TRANSSPLICED} {Pfam: Hereditary spastic paraplegia protein strumpellin [PF10266.11, score=1463.4]} {Human: ENSG00000164961, WASHC5, WASH complex subunit 5, [RH, Score=1311, Expect=0.0]} {Mouse: ENSMUSG00000022350, Washc5, WASH complex subunit 5, [RH, Score=1315, Expect=0.0]} {Dmel: FBgn0036571, Strumpellin, [RH, Score=909, Expect=0.0]} {Smed: dd_Smed_v6_3369_0_1, dd_Smed_v6_3369_0_1, [RH, Score=1112, Expect=0.0]} {RNA1509_3157} {RNA1310_2537.1} {RNA815_1918.1}

Cumulative graph for MligTC455_43625

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.51 3.691 0.65422 1.00000
RegionR2 1.125 3.691 0.05466 0.28004
RegionR3 0.668 3.691 0.12073 0.60036
RegionR4 -0.71 3.691 0.21358 0.49983
RegionR5 0.027 3.691 0.95146 1.00000
RegionR6 -0.127 3.691 0.78444 1.00000
RegionR7 0.482 3.691 0.38246 1.00000
RegionR8 -0.956 3.691 0.27652 0.90073

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.023 3.691 0.34648 1.00000
RegenerationR2 -0.748 3.691 0.15052 0.58390
RegenerationR3 -0.045 3.691 0.94439 1.00000
RegenerationR4 0.416 3.691 0.45028 0.84199
RegenerationR5 -0.272 3.691 0.59872 0.90957
RegenerationR6 0.427 3.691 0.46373 0.78034
RegenerationBL -0.215 3.691 0.80127 1.00000
RegenerationTP 0.434 3.691 0.58177 0.95070


Genes with expression patterns similar to MligTC455_43625

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43625 444 9.25 Mlig455_035948

Neo: -

Age: -

 WASHC5 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_035948 {REF} {Length: 4282} {TRANSSPLICED} {Pfam: Hereditary spastic paraplegia protein strumpellin [PF10266.11, score=1463.4]} {Human: ENSG00000164961, WASHC5, WASH complex subunit 5, [RH, Score=1311, Expect=0.0]} {Mouse: ENSMUSG00000022350, Washc5, WASH complex subunit 5, [RH, Score=1315, Expect=0.0]} {Dmel: FBgn0036571, Strumpellin, [RH, Score=909, Expect=0.0]} {Smed: dd_Smed_v6_3369_0_1, dd_Smed_v6_3369_0_1, [RH, Score=1112, Expect=0.0]} {RNA1509_3157} {RNA1310_2537.1} {RNA815_1918.1}
2. MligTC455_18086 601 12.53 Mlig455_015048

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.243

Region-enriched R5: 1.685/0.00002

 RACGAP1 1.741 - - 0.950 0.791 - - Mlig455_015048 {REF} {Length: 2664} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=118.3]} {Human: ENSG00000161800, RACGAP1, Rac GTPase activating protein 1, [RH, Score=154, Expect=6e-40]} {Mouse: ENSMUSG00000023015, Racgap1, Rac GTPase-activating protein 1, [RH, Score=154, Expect=5e-40]} {Dmel: FBgn0086356, tum, tumbleweed, [RH, Score=138, Expect=9e-35]} {Celegans: WBGene00015267, chin-1, CHImaeriN (Rac-GTPase-activating protein) homolog, [Score=85.5, Expect=1e-17]} {Smed: dd_Smed_v6_4507_0_2, dd_Smed_v6_4507_0_2, [Score=95.1, Expect=2e-20]} {RNA1509_8611} {RNA1310_10376, RNA1509_8611} {RNA1509_8611, RNA815_17205}
3. MligTC455_51985 306 6.38 Mlig455_026161

Neo: -

Age: logFC(26M/2M)=-0.411

 1.688 - - 0.957 - 0.731 - Mlig455_026161 {REF} {Length: 3131} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=39.8]} {Smed: dd_Smed_v6_3423_0_1, dd_Smed_v6_3423_0_1, [Score=78.6, Expect=6e-17]} {RNA1509_23666} {RNA1310_19234.2} {RNA815_18307}
4. MligTC455_11745 181 3.77 Mlig455_046002

Neo: -

Age: Up-Down-Up

 C2CD5 1.659 0.700 - 0.959 - - - Mlig455_046002 {REF} {Length: 4677} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=83.0]; Putative heavy-metal-binding [PF01906.19, score=26.1]} {Human: ENSG00000111731, C2CD5, C2 calcium dependent domain containing 5, [RH, Score=606, Expect=0.0]} {Mouse: ENSMUSG00000030279, C2cd5, C2 calcium-dependent domain containing 5, [RH, Score=676, Expect=0.0]} {Dmel: FBgn0039187, CG6454, [RH, Score=585, Expect=0.0]} {Celegans: WBGene00018719, F52H2.7, [RH, Score=169, Expect=3e-43]} {Smed: dd_Smed_v6_12816_0_1, dd_Smed_v6_12816_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_16685} {RNA1310_6672, RNA1509_16685} {RNA1509_16685, RNA815_2059}
5. MligTC455_17131 246 5.12 Mlig455_057133

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_057133 {REF} {Length: 1344} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=88.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=106, Expect=6e-30]} {RNA1509_43433} {RNA1310_48457} {RNA815_14530}
6. MligTC455_23919 451 9.4 Mlig455_030507

Neo: -

Age: -

Region-enriched R5: 1.291/0.00079

 0.968 - - 0.968 - - - Mlig455_030507 {REF} {Length: 3769} {Pfam: Methyltransferase domain [PF13649.8, score=46.7]; Methyltransferase domain [PF08241.14, score=43.3]; Transposase protein [PF12017.10, score=29.1]; Methyltransferase domain [PF08242.14, score=27.0]; Methyltransferase domain [PF13489.8, score=21.1]} {RNA1509_46318} {RNA1310_38338} {RNA815_5315}
7. MligTC455_40837 356 7.42 Mlig455_046106, Mlig455_070525

Neo: -

Age: -

 HS2ST1 0.966 - - 0.966 - - -

Mlig455_046106 {REF} {Length: 4309} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=109.5]; Galactose-3-O-sulfotransferase [PF06990.13, score=21.4]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=347, Expect=2e-117]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=345, Expect=7e-117]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [RH, Score=332, Expect=7e-112]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [RH, Score=257, Expect=2e-83]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [RH, Score=293, Expect=3e-97]} {RNA1509_17362} {RNA1310_14267.2} {RNA815_6989.1}

Mlig455_070525 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=81.4]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [Score=317, Expect=3e-107]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [Score=315, Expect=2e-106]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [Score=300, Expect=7e-101]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [Score=232, Expect=1e-74]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [Score=269, Expect=3e-89]} {RNA1509_17362, RNA1509_55740} {RNA1310_14267.1, RNA1509_17362, RNA1509_55740} {RNA1509_17362, RNA1509_55740, RNA815_6989.1}
8. MligTC455_36897 380 7.93 Mlig455_014087, Mlig455_052548

Neo: -

Age: -

Region-enriched R5: 2.064/0.00463
Region-enriched R3: 2.026/0.03980

 INSRR 0.965 - - 0.965 - - -

Mlig455_014087 {REF} {Length: 6810} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=255.8]; Protein kinase domain [PF00069.27, score=145.2]; Receptor family ligand binding region [PF01094.30, score=58.8]} {Human: ENSG00000027644, INSRR, insulin receptor related receptor, [Score=205, Expect=7e-53]; ENSG00000171105, INSR, insulin receptor, [Score=205, Expect=7e-53]; ENSG00000140443, IGF1R, insulin like growth factor 1 receptor, [Score=200, Expect=2e-51]; ENSG00000148053, NTRK2, neurotrophic receptor tyrosine kinase 2, [Score=196, Expect=4e-51]; ENSG00000198400, NTRK1, neurotrophic receptor tyrosine kinase 1, [Score=195, Expect=7e-51]} {Mouse: ENSMUSG00000005640, Insrr, insulin receptor-related receptor, [Score=201, Expect=1e-51]; ENSMUSG00000005534, Insr, insulin receptor, [Score=201, Expect=6e-52]; ENSMUSG00000055254, Ntrk2, neurotrophic tyrosine kinase, receptor, type 2, [Score=198, Expect=9e-52]; ENSMUSG00000028072, Ntrk1, neurotrophic tyrosine kinase, receptor, type 1, [Score=197, Expect=1e-51]; ENSMUSG00000005533, Igf1r, insulin-like growth factor I receptor, [Score=196, Expect=4e-50]} {Dmel: FBgn0010389, htl, heartless, [Score=177, Expect=1e-45]} {Celegans: WBGene00000018, abl-1, Tyrosine-protein kinase abl-1, [Score=188, Expect=3e-48]} {Smed: dd_Smed_v6_3349_0_1, dd_Smed_v6_3349_0_1, [RH, Score=233, Expect=2e-64]} {RNA1509_5171} {RNA1310_1491, RNA1509_5171} {RNA1509_5171, RNA815_402.1}

Mlig455_052548 {REF} {Length: 819} {Celegans: WBGene00012199, mltn-3, MLt-TeN (Mlt-10) related, [Score=53.1, Expect=7e-09]} {RNA1509_5171} {RNA1310_1491} {RNA815_402.1}
9. MligTC455_13251 89 1.86 Mlig455_005191

Neo: -

Age: logFC(26M/2M)=-0.503

 0.963 - - 0.963 - - - Mlig455_005191 {REF} {Length: 651} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=36.6]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=41.2, Expect=9e-06]} {RNA1509_40279} {RNA1310_35227} {RNA815_50075}
10. MligTC455_49435 387 8.06 Mlig455_036604, Mlig455_036644

Neo: Irradiation

Age: -

Region-enriched R5: 1.873/0.00079

 SOX2 0.961 - - 0.961 - - -

Mlig455_036604 {REF} {Length: 3167} {Pfam: HMG (high mobility group) box [PF00505.21, score=95.7]; HMG-box domain [PF09011.12, score=45.1]; SOX transcription factor [PF12336.10, score=32.1]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=173, Expect=8e-51]; ENSG00000125285, SOX21, SRY-box 21, [Score=166, Expect=1e-48]; ENSG00000168875, SOX14, SRY-box 14, [Score=165, Expect=2e-48]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=173, Expect=6e-51]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=166, Expect=8e-49]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=165, Expect=1e-48]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=159, Expect=2e-43]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=162, Expect=2e-47]} {Smed: dd_Smed_v6_8104_0_1, dd_Smed_v6_8104_0_1, [RH, Score=155, Expect=2e-42]} {RNA1509_24319, RNA1509_26685} {RNA1310_20983, RNA1509_24319, RNA1509_26685} {RNA1509_24319, RNA1509_26685, RNA815_14494.1}

Mlig455_036644 {REF} {Length: 3333} {Pfam: HMG (high mobility group) box [PF00505.21, score=95.7]; HMG-box domain [PF09011.12, score=45.1]; SOX transcription factor [PF12336.10, score=29.6]} {Human: ENSG00000181449, SOX2, SRY-box 2, [Score=174, Expect=5e-51]; ENSG00000125285, SOX21, SRY-box 21, [Score=167, Expect=8e-49]; ENSG00000168875, SOX14, SRY-box 14, [Score=166, Expect=8e-49]} {Mouse: ENSMUSG00000074637, Sox2, SRY (sex determining region Y)-box 2, [Score=174, Expect=4e-51]; ENSMUSG00000061517, Sox21, SRY (sex determining region Y)-box 21, [Score=167, Expect=4e-49]; ENSMUSG00000053747, Sox14, SRY (sex determining region Y)-box 14, [Score=166, Expect=5e-49]} {Dmel: FBgn0029123, SoxN, SoxNeuro, [RH, Score=159, Expect=2e-43]} {Celegans: WBGene00004949, sox-2, Transcription factor sox-2, [Score=164, Expect=6e-48]} {Smed: dd_Smed_v6_13215_0_1, dd_Smed_v6_13215_0_1, [RH, Score=161, Expect=1e-44]} {RNA1509_24319} {RNA1310_20983} {RNA815_14494.1}
11. MligTC455_21346 270 5.63 Mlig455_032862

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.600

 NR1I2 0.958 - - 0.958 - - - Mlig455_032862 {REF} {Length: 3577} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=71.5]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=23.1]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=93.2, Expect=1e-19]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=92.4, Expect=7e-20]; ENSG00000111424, VDR, vitamin D receptor, [Score=91.3, Expect=5e-19]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=92.4, Expect=6e-20]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=91.7, Expect=2e-19]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=90.1, Expect=7e-19]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=127, Expect=8e-31]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=106, Expect=5e-24]} {Smed: dd_Smed_v6_11714_0_1, dd_Smed_v6_11714_0_1, [RH, Score=316, Expect=9e-103]} {RNA1509_22518} {RNA1310_17232, RNA1509_22518} {RNA1509_22518, RNA815_5060}
12. MligTC455_33391 245 5.11 Mlig455_059002

Neo: -

Age: -

Region-enriched R5: 1.787/0.02115

 0.958 - - 0.958 - - - Mlig455_059002 {REF} {Length: 2432} {RNA1509_27032} {RNA1310_42017, RNA1509_27032} {RNA1509_27032, RNA815_23922}
13. MligTC455_49811 323 6.73 Mlig455_035309

Neo: Int S/G2/M

Age: -

 ASCC2 0.957 - - 0.957 - - - Mlig455_035309 {REF} {Length: 4782} {Pfam: CUE domain [PF02845.18, score=31.9]} {Human: ENSG00000100325, ASCC2, activating signal cointegrator 1 complex subunit 2, [Score=224, Expect=2e-61]} {Mouse: ENSMUSG00000020412, Ascc2, activating signal cointegrator 1 complex subunit 2, [Score=189, Expect=9e-50]} {Dmel: FBgn0024973, CG2701, [Score=82.8, Expect=8e-16]} {RNA1509_34484, RNA1509_7044} {RNA1310_7597, RNA1509_34484} {RNA1509_34484, RNA815_1952.1}
14. MligTC455_37237 118 2.46 Mlig455_053782

Neo: -

Age: -

 ABTB1 0.956 - - 0.956 - - - Mlig455_053782 {REF} {Length: 2455} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF00651.33, score=95.5]} {Human: ENSG00000114626, ABTB1, ankyrin repeat and BTB domain containing 1, [RH, Score=184, Expect=1e-53]} {Mouse: ENSMUSG00000030083, Abtb1, ankyrin repeat and BTB (POZ) domain containing 1, [Score=171, Expect=1e-48]} {Dmel: FBgn0040038, klhl10, kelch like family member 10, [Score=47.4, Expect=1e-05]} {Smed: dd_Smed_v6_7778_0_1, dd_Smed_v6_7778_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_58824} {RNA1310_20025, RNA1509_58824}
15. MligTC455_52771 304 6.33 Mlig455_029195

Neo: -

Age: Down-Down-Up

Region-enriched R5: 1.274/0.00675

 ZNF233 0.956 - - 0.956 - - - Mlig455_029195 {REF} {Length: 2267} {TRANSSPLICED} {Pfam: Zinc-finger double domain [PF13465.8, score=74.2]; C2H2-type zinc finger [PF13894.8, score=51.8]; Zinc finger, C2H2 type [PF00096.28, score=47.6]; C2H2-type zinc finger [PF13912.8, score=39.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=33.5]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=20.3]} {Human: ENSG00000159915, ZNF233, zinc finger protein 233, [Score=107, Expect=5e-27]} {Mouse: ENSMUSG00000074865, Zfp934, zinc finger protein 934, [Score=111, Expect=9e-29]; ENSMUSG00000059423, Zfp933, zinc finger protein 933, [Score=110, Expect=3e-28]; ENSMUSG00000090744, Gm6871, predicted gene 6871, [Score=108, Expect=2e-27]; ENSMUSG00000074867, Zfp808, zinc finger protein 808, [Score=108, Expect=2e-27]; ENSMUSG00000087598, Zfp111, zinc finger protein 111, [Score=108, Expect=2e-27]} {Dmel: FBgn0035625, Blimp-1, [Score=100, Expect=9e-25]} {Celegans: WBGene00003847, blmp-1, B lymphocyte-induced maturation protein 1 homolog, [Score=101, Expect=4e-25]} {Smed: dd_Smed_v6_75162_0_1, dd_Smed_v6_75162_0_1, [Score=95.5, Expect=4e-25]} {RNA1509_10690} {RNA1310_16637} {RNA815_8191}
16. MligTC455_50351 87 1.82 Mlig455_042590

Neo: -

Age: logFC(26M/2M)=-1.032

 RETSAT 0.954 - - 0.954 - - - Mlig455_042590 {REF} {Length: 2445} {TRANSSPLICED} {Human: ENSG00000042445, RETSAT, retinol saturase, [Score=70.1, Expect=1e-12]} {Mouse: ENSMUSG00000056666, Retsat, retinol saturase (all trans retinol 13,14 reductase), [Score=58.9, Expect=3e-09]} {RNA1509_11186, RNA1509_36297} {RNA1310_6975.1, RNA1509_36297} {RNA1509_36297, RNA815_3383.1}
17. MligTC455_17132 246 5.12 Mlig455_069284

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_069284 {REF} {Length: 6700} {Pfam: Universal stress protein family [PF00582.28, score=88.7]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=106, Expect=6e-30]} {RNA1509_43433} {RNA1310_48457, RNA1509_43433} {RNA1509_43433, RNA815_14530}
18. MligTC455_21066 306 6.38 Mlig455_036488

Neo: -

Age: logFC(26M/2M)=-0.511

Region-enriched R2: 1.835/0.04804

 RABEPK 0.953 - - 0.953 - - - Mlig455_036488 {REF} {Length: 3248} {TRANSSPLICED} {Pfam: Galactose oxidase, central domain [PF13418.8, score=103.2]; Galactose oxidase, central domain [PF13415.8, score=88.3]; Kelch motif [PF13854.8, score=80.8]; Kelch motif [PF13964.8, score=78.9]; Kelch motif [PF01344.27, score=56.4]; Kelch motif [PF07646.17, score=53.5]} {Human: ENSG00000136933, RABEPK, Rab9 effector protein with kelch motifs, [RH, Score=202, Expect=8e-61]} {Mouse: ENSMUSG00000070953, Rabepk, Rab9 effector protein with kelch motifs, [RH, Score=195, Expect=3e-58]} {Dmel: FBgn0040344, CG3711, [Score=68.9, Expect=3e-12]} {Smed: dd_Smed_v6_6387_0_1, dd_Smed_v6_6387_0_1, [Score=56.6, Expect=1e-08]} {RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075} {RNA1310_16584, RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075} {RNA1509_13410, RNA1509_21872, RNA1509_25760, RNA1509_46075, RNA815_18867}
19. MligTC455_24138 781 16.26 Mlig455_006752

Neo: Irradiation

Age: -

Region-enriched R5: 2.061/0.00001

 PDE1C 0.952 - - 0.952 - - - Mlig455_006752 {REF} {Length: 4322} {Pfam: 3'5'-cyclic nucleotide phosphodiesterase [PF00233.21, score=267.9]; 3'5'-cyclic nucleotide phosphodiesterase N-terminal [PF08499.14, score=92.6]} {Human: ENSG00000154678, PDE1C, phosphodiesterase 1C, [Score=494, Expect=7e-164]} {Mouse: ENSMUSG00000004347, Pde1c, phosphodiesterase 1C, [Score=499, Expect=3e-166]} {Dmel: FBgn0264815, Pde1c, Phosphodiesterase 1c, [Score=502, Expect=2e-164]} {Celegans: WBGene00011433, pde-1, Probable 3',5'-cyclic phosphodiesterase pde-1, [Score=440, Expect=2e-146]} {Smed: dd_Smed_v6_11039_0_2, dd_Smed_v6_11039_0_2, [Score=544, Expect=0.0]} {RNA1509_14055} {RNA1310_10912.4} {RNA815_1979.1}
20. MligTC455_27198 106 2.2 Mlig455_039551

Neo: -

Age: Up-Down-Up

 MPP7 0.952 - - 0.952 - - - Mlig455_039551 {REF} {Length: 3414} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=44.5]; Guanylate kinase [PF00625.23, score=36.4]; L27 domain [PF02828.18, score=24.6]; Variant SH3 domain [PF07653.19, score=20.4]} {Human: ENSG00000150054, MPP7, membrane palmitoylated protein 7, [Score=268, Expect=5e-82]} {Mouse: ENSMUSG00000057440, Mpp7, membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7), [Score=288, Expect=6e-90]} {Dmel: FBgn0050021, metro, menage a trois, [RH, Score=296, Expect=5e-93]} {Celegans: WBGene00021914, magu-1, MAGUK family, [Score=162, Expect=2e-43]} {Smed: dd_Smed_v6_7957_0_1, dd_Smed_v6_7957_0_1, [RH, Score=377, Expect=2e-124]} {RNA1509_59177} {RNA1310_8192} {RNA815_18062}
21. MligTC455_35359 375 7.81 Mlig455_062928

Neo: -

Age: Up-Down-Down

 SCAP 0.952 - - 0.952 - - - Mlig455_062928 {REF} {Length: 5472} {TRANSSPLICED} {Pfam: Sterol-sensing domain of SREBP cleavage-activation [PF12349.10, score=147.1]; Patched family [PF02460.20, score=59.8]; WD domain, G-beta repeat [PF00400.34, score=28.0]} {Human: ENSG00000114650, SCAP, SREBF chaperone, [RH, Score=364, Expect=8e-106]} {Mouse: ENSMUSG00000032485, Scap, SREBF chaperone, [RH, Score=362, Expect=3e-105]} {Dmel: FBgn0033052, SCAP, SREBP cleavage activating protein, [RH, Score=289, Expect=2e-80]} {Celegans: WBGene00004744, scp-1, SREBP Cleavage activating Protein (SCAP) homolog, [RH, Score=236, Expect=1e-63]} {Smed: dd_Smed_v6_12222_0_1, dd_Smed_v6_12222_0_1, [RH, Score=366, Expect=2e-108]} {RNA1509_25017, RNA1509_28936} {RNA1310_1382.1, RNA1509_25017, RNA1509_28936} {RNA1509_25017, RNA1509_28936, RNA815_1411.1}
22. MligTC455_42899 170 3.54 Mlig455_048941

Neo: Int S/G2/M

Age: -

Regeneration-upregulated R6: 3.019

Regeneration-enriched R6: 3.019

 RANGAP1 0.952 - - 0.952 - - - Mlig455_048941 {REF} {Length: 4346} {Pfam: Leucine Rich repeat [PF13516.8, score=59.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.8]; Leucine rich repeat [PF13855.8, score=28.5]} {Human: ENSG00000100401, RANGAP1, Ran GTPase activating protein 1, [RH, Score=233, Expect=8e-66]} {Mouse: ENSMUSG00000022391, Rangap1, RAN GTPase activating protein 1, [RH, Score=235, Expect=5e-67]} {Dmel: FBgn0003346, RanGAP, Ran GTPase activating protein, [RH, Score=232, Expect=7e-66]} {Celegans: WBGene00004303, ran-2, Ran GTPase-activating protein 2, [RH, Score=204, Expect=2e-54]} {Smed: dd_Smed_v6_7553_0_1, dd_Smed_v6_7553_0_1, [RH, Score=249, Expect=3e-71]} {RNA1509_13509} {RNA1310_6885} {RNA815_9884}
23. MligTC455_33485 1296 27.01 Mlig455_048627, Mlig455_048705, Mlig455_069750

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.383

 0.951 - - 0.951 - - -

Mlig455_048627 {REF} {Length: 1569} {TRANSSPLICED} {RNA1509_18958, RNA1509_37074} {RNA1310_22957, RNA1509_18958, RNA1509_37074} {RNA1509_18958, RNA1509_37074, RNA815_949}

Mlig455_048705 {REF} {Length: 1875} {RNA1509_37074} {RNA1310_22957} {RNA815_949}

Mlig455_069750 {REF} {Length: 1555} {TRANSSPLICED} {RNA1509_27010, RNA1509_37074} {RNA1310_22957, RNA1509_27010} {RNA1509_27010, RNA815_949}
24. MligTC455_49581 250 5.21 Mlig455_002681

Neo: -

Age: Down-Up-Down

 NOCT 0.951 - - 0.951 - - - Mlig455_002681 {REF} {Length: 2713} {TRANSSPLICED} {Pfam: Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=52.3]} {Human: ENSG00000151014, NOCT, nocturnin, [RH, Score=159, Expect=1e-44]} {Mouse: ENSMUSG00000023087, Noct, nocturnin, [RH, Score=163, Expect=1e-46]} {Dmel: FBgn0261808, cu, curled, [RH, Score=155, Expect=4e-43]} {Smed: dd_Smed_v6_11463_0_2, dd_Smed_v6_11463_0_2, [Score=63.5, Expect=5e-11]} {RNA1509_14443, RNA1509_60012} {RNA1310_22622.1, RNA1509_60012} {RNA1509_60012, RNA815_6457}
25. MligTC455_23553 165 3.44 Mlig455_020966

Neo: -

Age: -

 CSNK1G1 0.95 - - 0.950 - - - Mlig455_020966 {REF} {Length: 3985} {Pfam: Protein kinase domain [PF00069.27, score=100.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=54.6]; Fungal protein kinase [PF17667.3, score=29.0]} {Human: ENSG00000169118, CSNK1G1, casein kinase 1 gamma 1, [RH, Score=529, Expect=0.0]; ENSG00000151292, CSNK1G3, casein kinase 1 gamma 3, [RH, Score=521, Expect=0.0]; ENSG00000133275, CSNK1G2, casein kinase 1 gamma 2, [RH, Score=514, Expect=5e-180]} {Mouse: ENSMUSG00000032384, Csnk1g1, casein kinase 1, gamma 1, [RH, Score=538, Expect=0.0]; ENSMUSG00000073563, Csnk1g3, casein kinase 1, gamma 3, [RH, Score=513, Expect=1e-179]} {Dmel: FBgn0250823, gish, gilgamesh, [RH, Score=514, Expect=9e-180]} {Celegans: WBGene00013709, csnk-1, Casein kinase I gamma, [RH, Score=513, Expect=2e-180]} {Smed: dd_Smed_v6_8508_0_2, dd_Smed_v6_8508_0_2, [RH, Score=464, Expect=3e-161]} {RNA1509_20026} {RNA1310_20582.1} {RNA815_13120.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA