Data search


search
Exact
Search

Results for MligTC455_43649

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43649 1066 22.20 Mlig455_062073

Neo: -

Age: -

MTG2 Mlig455_062073 {REF} {Length: 1873} {TRANSSPLICED} {Pfam: GTP1/OBG [PF01018.24, score=157.8]; 50S ribosome-binding GTPase [PF01926.25, score=78.7]; TMEM70/TMEM186/TMEM223 protein family [PF06979.14, score=33.2]; Ferrous iron transport protein B [PF02421.20, score=28.8]} {Human: ENSG00000101181, MTG2, mitochondrial ribosome associated GTPase 2, [RH, Score=227, Expect=6e-69]} {Mouse: ENSMUSG00000039069, Mtg2, mitochondrial ribosome associated GTPase 2, [RH, Score=207, Expect=2e-61]} {Dmel: FBgn0032031, CG13390, [RH, Score=247, Expect=5e-77]} {Celegans: WBGene00010805, M01E5.2, [RH, Score=236, Expect=4e-73]} {Smed: dd_Smed_v6_5301_0_1, dd_Smed_v6_5301_0_1, [RH, Score=234, Expect=3e-72]} {RNA1509_12535, RNA1509_21565} {RNA1310_20347, RNA1509_21565} {RNA1509_21565, RNA815_15096}

Cumulative graph for MligTC455_43649

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.192 4.665 0.82780 1.00000
RegionR2 -0.233 4.665 0.56132 0.92338
RegionR3 -0.004 4.665 0.98913 1.00000
RegionR4 0.93 4.665 0.01011 0.06154
RegionR5 0.298 4.665 0.30779 0.64544
RegionR6 -0.515 4.665 0.13426 0.65849
RegionR7 -0.245 4.665 0.56833 1.00000
RegionR8 -0.038 4.665 0.94101 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.756 4.665 0.56525 1.00000
RegenerationR2 -0.155 4.665 0.65160 0.93716
RegenerationR3 0.219 4.665 0.55443 0.88602
RegenerationR4 -0.473 4.665 0.20242 0.64844
RegenerationR5 -0.04 4.665 0.90641 1.00000
RegenerationR6 0.605 4.665 0.11816 0.42270
RegenerationBL 0.306 4.665 0.47729 0.84296
RegenerationTP -0.383 4.665 0.44058 0.86034


Genes with expression patterns similar to MligTC455_43649

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43649 1066 22.2 Mlig455_062073

Neo: -

Age: -

MTG2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_062073 {REF} {Length: 1873} {TRANSSPLICED} {Pfam: GTP1/OBG [PF01018.24, score=157.8]; 50S ribosome-binding GTPase [PF01926.25, score=78.7]; TMEM70/TMEM186/TMEM223 protein family [PF06979.14, score=33.2]; Ferrous iron transport protein B [PF02421.20, score=28.8]} {Human: ENSG00000101181, MTG2, mitochondrial ribosome associated GTPase 2, [RH, Score=227, Expect=6e-69]} {Mouse: ENSMUSG00000039069, Mtg2, mitochondrial ribosome associated GTPase 2, [RH, Score=207, Expect=2e-61]} {Dmel: FBgn0032031, CG13390, [RH, Score=247, Expect=5e-77]} {Celegans: WBGene00010805, M01E5.2, [RH, Score=236, Expect=4e-73]} {Smed: dd_Smed_v6_5301_0_1, dd_Smed_v6_5301_0_1, [RH, Score=234, Expect=3e-72]} {RNA1509_12535, RNA1509_21565} {RNA1310_20347, RNA1509_21565} {RNA1509_21565, RNA815_15096}
2. MligTC455_43648 3272 68.17 Mlig455_008300, Mlig455_040566, Mlig455_040648

Neo: -

Age: logFC(26M/2M)=0.944

MTG2 5.94 0.999 0.999 0.996 0.999 0.999 0.948

Mlig455_008300 {REF} {Length: 1782} {TRANSSPLICED} {Pfam: GTP1/OBG [PF01018.24, score=157.6]; 50S ribosome-binding GTPase [PF01926.25, score=78.4]; TMEM70/TMEM186/TMEM223 protein family [PF06979.14, score=49.7]; Ferrous iron transport protein B [PF02421.20, score=28.5]} {Human: ENSG00000101181, MTG2, mitochondrial ribosome associated GTPase 2, [RH, Score=227, Expect=3e-68]} {Mouse: ENSMUSG00000039069, Mtg2, mitochondrial ribosome associated GTPase 2, [RH, Score=207, Expect=5e-61]} {Dmel: FBgn0032031, CG13390, [RH, Score=247, Expect=1e-76]} {Celegans: WBGene00010805, M01E5.2, [RH, Score=236, Expect=1e-72]} {Smed: dd_Smed_v6_5301_0_1, dd_Smed_v6_5301_0_1, [RH, Score=234, Expect=1e-71]} {RNA1509_21565} {RNA1310_22911} {RNA815_15096}

Mlig455_040566 {REF} {Length: 1921} {TRANSSPLICED} {Pfam: GTP1/OBG [PF01018.24, score=157.7]; 50S ribosome-binding GTPase [PF01926.25, score=78.6]; TMEM70/TMEM186/TMEM223 protein family [PF06979.14, score=32.4]; Ferrous iron transport protein B [PF02421.20, score=28.7]} {Human: ENSG00000101181, MTG2, mitochondrial ribosome associated GTPase 2, [RH, Score=227, Expect=2e-68]} {Mouse: ENSMUSG00000039069, Mtg2, mitochondrial ribosome associated GTPase 2, [RH, Score=207, Expect=3e-61]} {Dmel: FBgn0032031, CG13390, [RH, Score=247, Expect=7e-77]} {Celegans: WBGene00010805, M01E5.2, [RH, Score=235, Expect=8e-73]} {Smed: dd_Smed_v6_5301_0_1, dd_Smed_v6_5301_0_1, [RH, Score=234, Expect=1e-71]} {RNA1509_12535} {RNA1310_20347} {RNA815_15096}

Mlig455_040648 {REF} {Length: 1921} {TRANSSPLICED} {Pfam: GTP1/OBG [PF01018.24, score=157.7]; 50S ribosome-binding GTPase [PF01926.25, score=78.6]; TMEM70/TMEM186/TMEM223 protein family [PF06979.14, score=32.4]; Ferrous iron transport protein B [PF02421.20, score=28.7]} {Human: ENSG00000101181, MTG2, mitochondrial ribosome associated GTPase 2, [RH, Score=227, Expect=2e-68]} {Mouse: ENSMUSG00000039069, Mtg2, mitochondrial ribosome associated GTPase 2, [RH, Score=207, Expect=3e-61]} {Dmel: FBgn0032031, CG13390, [RH, Score=247, Expect=7e-77]} {Celegans: WBGene00010805, M01E5.2, [RH, Score=235, Expect=8e-73]} {Smed: dd_Smed_v6_5301_0_1, dd_Smed_v6_5301_0_1, [RH, Score=234, Expect=1e-71]} {RNA1509_12535} {RNA1310_20347} {RNA815_15096}
3. MligTC455_52145 1127 23.49 Mlig455_065201

Neo: -

Age: logFC(26M/2M)=0.648

Region-enriched R4: 2.429/0.00000

CETN3 2.493 - - 0.723 0.955 0.815 - Mlig455_065201 {REF} {Length: 777} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=85.2]; EF hand [PF00036.34, score=78.4]; EF-hand domain [PF13405.8, score=69.6]; EF-hand domain pair [PF13833.8, score=62.1]; EF hand [PF13202.8, score=41.3]; EF-hand domain [PF14658.8, score=28.4]; EF-hand domain [PF17959.3, score=21.5]; Caleosin related protein [PF05042.15, score=20.7]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.9]} {Human: ENSG00000153140, CETN3, centrin 3, [RH, Score=221, Expect=3e-74]} {Mouse: ENSMUSG00000021537, Cetn3, centrin 3, [RH, Score=220, Expect=3e-74]} {Dmel: FBgn0040010, CG17493, [Score=146, Expect=4e-45]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=95.9, Expect=9e-26]} {Smed: dd_Smed_v6_11582_0_1, dd_Smed_v6_11582_0_1, [RH, Score=207, Expect=2e-69]} {RNA1509_16694, RNA1509_5944} {RNA1310_28289.1, RNA1509_16694, RNA1509_5944} {RNA1509_16694, RNA1509_5944, RNA815_14129}
4. MligTC455_18411 1057 22.01 Mlig455_013397

Neo: -

Age: -

WDR41 1.891 - - - 0.916 - 0.975 Mlig455_013397 {REF} {Length: 2896} {Pfam: WD domain, G-beta repeat [PF00400.34, score=41.9]} {Human: ENSG00000164253, WDR41, WD repeat domain 41, [RH, Score=68.2, Expect=1e-11]} {Mouse: ENSMUSG00000042015, Wdr41, WD repeat domain 41, [RH, Score=68.2, Expect=7e-12]} {RNA1509_34814} {RNA1310_18965, RNA1509_34814} {RNA1509_34814, RNA815_21793}
5. MligTC455_40113 1364 28.42 Mlig455_050174

Neo: -

Age: Down-Up-Up

DNAJC21 1.735 - - - 0.782 - 0.953 Mlig455_050174 {REF} {Length: 3708} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=158.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=28.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.6]; Zinc-finger of C2H2 type [PF12874.9, score=21.3]; C2H2-type zinc finger [PF13894.8, score=19.4]; Protein of unknown function (DUF2778) [PF10908.10, score=19.0]} {Human: ENSG00000168724, DNAJC21, DnaJ heat shock protein family (Hsp40) member C21, [Score=320, Expect=2e-98]} {Mouse: ENSMUSG00000044224, Dnajc21, DnaJ heat shock protein family (Hsp40) member C21, [RH, Score=317, Expect=1e-97]} {Dmel: FBgn0027599, CG2790, [RH, Score=292, Expect=2e-88]} {Celegans: WBGene00001035, dnj-17, DNaJ domain (Prokaryotic heat shock protein), [Score=142, Expect=7e-36]} {Smed: dd_Smed_v6_5775_0_1, dd_Smed_v6_5775_0_1, [Score=253, Expect=2e-74]} {RNA1509_5192} {RNA1310_14822} {RNA815_6329}
6. MligTC455_50689 2672 55.67 Mlig455_020230

Neo: Int S/G2/M

Age: -

RNGTT 1.713 - - - 0.962 0.751 - Mlig455_020230 {REF} {Length: 2267} {TRANSSPLICED} {Pfam: mRNA capping enzyme, catalytic domain [PF01331.21, score=200.6]; mRNA capping enzyme, C-terminal domain [PF03919.17, score=67.3]; Dual specificity phosphatase, catalytic domain [PF00782.22, score=39.3]} {Human: ENSG00000111880, RNGTT, RNA guanylyltransferase and 5'-phosphatase, [RH, Score=512, Expect=2e-175]} {Mouse: ENSMUSG00000028274, Rngtt, RNA guanylyltransferase and 5'-phosphatase, [RH, Score=532, Expect=0.0]} {Dmel: FBgn0030556, mRNA-cap, mRNA-capping-enzyme, [RH, Score=479, Expect=2e-162]} {Celegans: WBGene00000466, cel-1, mRNA-capping enzyme Polynucleotide 5'-triphosphatase mRNA guanylyltransferase, [RH, Score=372, Expect=4e-121]} {Smed: dd_Smed_v6_8175_0_1, dd_Smed_v6_8175_0_1, [RH, Score=437, Expect=9e-147]} {RNA1509_17732, RNA1509_3356} {RNA1310_10589, RNA1509_17732, RNA1509_3356} {RNA1509_17732, RNA1509_3356, RNA815_3625}
7. MligTC455_21053 652 13.59 Mlig455_027344

Neo: -

Age: -

Region-enriched R5: 1.297/0.00104

KPNA6 1.71 - - 0.950 - - 0.760 Mlig455_027344 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=125.9]; Atypical Arm repeat [PF16186.7, score=51.1]} {Human: ENSG00000025800, KPNA6, karyopherin subunit alpha 6, [Score=407, Expect=7e-137]; ENSG00000196911, KPNA5, karyopherin subunit alpha 5, [Score=397, Expect=6e-133]} {Mouse: ENSMUSG00000003731, Kpna6, karyopherin (importin) alpha 6, [Score=412, Expect=8e-139]} {Dmel: FBgn0024889, Kap-alpha1, karyopherin alpha1, [Score=378, Expect=1e-125]} {Celegans: WBGene00002074, ima-3, Importin subunit alpha-3, [Score=285, Expect=5e-90]} {Smed: dd_Smed_v6_590_0_1, dd_Smed_v6_590_0_1, [Score=283, Expect=2e-89]} {RNA1509_32318} {RNA1310_14767} {RNA815_19038}
8. MligTC455_29461 23656 492.83 Mlig455_021877

Neo: Int S/G2/M

Age: -

RPL5 0.958 - - - 0.958 - - Mlig455_021877 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154, RNA1509_16244, RNA1509_36509} {RNA1310_31746.1, RNA1509_16244, RNA1509_36509} {RNA1509_16244, RNA1509_36509, RNA815_10534.2}
9. MligTC455_29462 23309 485.61 Mlig455_021960

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.690

RPL5 0.956 - - - 0.956 - - Mlig455_021960 {REF} {Length: 1113} {TRANSSPLICED} {Pfam: Ribosomal large subunit proteins 60S L5, and 50S L18 [PF17144.6, score=291.1]; Ribosomal L18 C-terminal region [PF14204.8, score=66.8]} {Human: ENSG00000122406, RPL5, ribosomal protein L5, [RH, Score=377, Expect=2e-131]} {Mouse: ENSMUSG00000058558, Rpl5, ribosomal protein L5, [RH, Score=362, Expect=9e-126]} {Dmel: FBgn0064225, RpL5, Ribosomal protein L5, [RH, Score=394, Expect=2e-138]} {Celegans: WBGene00004416, rpl-5, 60S ribosomal protein L5, [RH, Score=322, Expect=1e-110]} {Smed: dd_Smed_v6_151_0_1, dd_Smed_v6_151_0_1, [RH, Score=342, Expect=2e-118]} {RNA1509_154} {RNA1310_31746.1, RNA1509_154} {RNA1509_154, RNA815_10534.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA