Data search


search
Exact
Search

Results for MligTC455_43661

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43661 13 0.28 Mlig455_003310

Neo: -

Age: Down-Down-Down

Mlig455_003310 {REF} {Length: 3711} {Pfam: Leucine rich repeat [PF13855.8, score=47.8]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.9]} {RNA1310_20870} {RNA815_18103}

Cumulative graph for MligTC455_43661

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.081 0.78 0.99947 1.00000
RegionR2 1.821 0.78 0.24492 0.62160
RegionR3 1.733 0.78 0.13148 0.62257
RegionR4 0.755 0.78 0.68773 0.97955
RegionR5 -0.032 0.78 0.75316 1.00000
RegionR6 1.422 0.78 0.31558 0.90370
RegionR7 -2.259 0.78 0.99953 1.00000
RegionR8 -2.36 0.78 0.99954 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.328 0.78 0.99991 1.00000
RegenerationR2 -0.536 0.78 0.71980 0.96301
RegenerationR3 1.121 0.78 0.13373 0.55712
RegenerationR4 0.225 0.78 0.39472 0.81013
RegenerationR5 1.518 0.78 0.07778 0.43524
RegenerationR6 -0.517 0.78 0.87337 1.00000
RegenerationBL 2.216 0.78 0.99989 1.00000
RegenerationTP 4.475 0.78 0.05070 0.36932


Genes with expression patterns similar to MligTC455_43661

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43661 13 0.28 Mlig455_003310

Neo: -

Age: Down-Down-Down

1 - - - - - 1.000 Mlig455_003310 {REF} {Length: 3711} {Pfam: Leucine rich repeat [PF13855.8, score=47.8]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=26.5]; Leucine Rich repeats (2 copies) [PF12799.9, score=25.9]} {RNA1310_20870} {RNA815_18103}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA