TomoSeq data search

Data search

Results for MligTC455_43703

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43703	1249	26.02	Mlig455_046517, Mlig455_046615	Neo: Irradiation Age: - Region-enriched R5: 1.452/0.01419	SLIT1	Mlig455_046517 {REF} {Length: 4033} {Pfam: Leucine rich repeat [PF13855.8, score=61.5]; Leucine Rich Repeat [PF00560.35, score=26.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.4]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=85.1, Expect=4e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=79.3, Expect=7e-15]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00008977, iglr-1, IG(Immunoglobulin) and LRR(Leucine Rich Repeat) domains, [Score=48.9, Expect=9e-06]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=135, Expect=4e-34]} {RNA1509_13979, RNA1509_29267} {RNA1310_10154.1, RNA1509_13979, RNA1509_29267} {RNA1509_13979, RNA1509_29267, RNA815_4611} Mlig455_046615 {REF} {Length: 4096} {Pfam: Leucine rich repeat [PF13855.8, score=61.5]; Leucine Rich Repeat [PF00560.35, score=26.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.4]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=85.1, Expect=4e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=79.3, Expect=7e-15]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00008977, iglr-1, IG(Immunoglobulin) and LRR(Leucine Rich Repeat) domains, [Score=48.9, Expect=9e-06]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=135, Expect=4e-34]} {RNA1509_13979} {RNA1310_10154.1} {RNA815_4611}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43703

1249

26.02

Mlig455_046517, Mlig455_046615

Neo: Irradiation

Age: -

Region-enriched R5: 1.452/0.01419

SLIT1

Mlig455_046517 {REF} {Length: 4033} {Pfam: Leucine rich repeat [PF13855.8, score=61.5]; Leucine Rich Repeat [PF00560.35, score=26.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.4]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=85.1, Expect=4e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=79.3, Expect=7e-15]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00008977, iglr-1, IG(Immunoglobulin) and LRR(Leucine Rich Repeat) domains, [Score=48.9, Expect=9e-06]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=135, Expect=4e-34]} {RNA1509_13979, RNA1509_29267} {RNA1310_10154.1, RNA1509_13979, RNA1509_29267} {RNA1509_13979, RNA1509_29267, RNA815_4611}

Mlig455_046615 {REF} {Length: 4096} {Pfam: Leucine rich repeat [PF13855.8, score=61.5]; Leucine Rich Repeat [PF00560.35, score=26.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.4]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=85.1, Expect=4e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=79.3, Expect=7e-15]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00008977, iglr-1, IG(Immunoglobulin) and LRR(Leucine Rich Repeat) domains, [Score=48.9, Expect=9e-06]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=135, Expect=4e-34]} {RNA1509_13979} {RNA1310_10154.1} {RNA815_4611}

Cumulative graph for MligTC455_43703

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.904	4.903	0.47965	1.00000
RegionR2	0.978	4.903	0.12731	0.44261
RegionR3	-0.08	4.903	0.88331	1.00000
RegionR4	-0.498	4.903	0.41222	0.73942
RegionR5	1.452	4.903	0.00152	0.01419
RegionR6	0.416	4.903	0.41115	0.98034
RegionR7	-0.97	4.903	0.13892	0.69827
RegionR8	-0.394	4.903	0.56627	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.052	4.903	0.52405	1.00000
RegenerationR2	1.09	4.903	0.06509	0.41779
RegenerationR3	1.077	4.903	0.10045	0.50429
RegenerationR4	0.471	4.903	0.46883	0.85270
RegenerationR5	-0.04	4.903	0.95016	1.00000
RegenerationR6	0.159	4.903	0.80497	0.97986
RegenerationBL	-1.481	4.903	0.08523	0.34223
RegenerationTP	1.324	4.903	0.04729	0.35793

Genes with expression patterns similar to MligTC455_43703

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43703	1249	26.02	Mlig455_046517, Mlig455_046615	Neo: Irradiation Age: - Region-enriched R5: 1.452/0.01419	SLIT1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_046517 {REF} {Length: 4033} {Pfam: Leucine rich repeat [PF13855.8, score=61.5]; Leucine Rich Repeat [PF00560.35, score=26.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.4]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=85.1, Expect=4e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=79.3, Expect=7e-15]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00008977, iglr-1, IG(Immunoglobulin) and LRR(Leucine Rich Repeat) domains, [Score=48.9, Expect=9e-06]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=135, Expect=4e-34]} {RNA1509_13979, RNA1509_29267} {RNA1310_10154.1, RNA1509_13979, RNA1509_29267} {RNA1509_13979, RNA1509_29267, RNA815_4611} Mlig455_046615 {REF} {Length: 4096} {Pfam: Leucine rich repeat [PF13855.8, score=61.5]; Leucine Rich Repeat [PF00560.35, score=26.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=26.4]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=85.1, Expect=4e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=79.3, Expect=7e-15]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Celegans: WBGene00008977, iglr-1, IG(Immunoglobulin) and LRR(Leucine Rich Repeat) domains, [Score=48.9, Expect=9e-06]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=135, Expect=4e-34]} {RNA1509_13979} {RNA1310_10154.1} {RNA815_4611}
2.	MligTC455_23370	144	3.01	Mlig455_065633	Neo: - Age: Down-Up-Up		0.967	-	-	-	0.967	-	-	Mlig455_065633 {REF} {Length: 1422} {RNA1509_56375} {RNA1310_29166.1, RNA1509_56375} {RNA1509_56375, RNA815_11123}
3.	MligTC455_25383	64	1.34	Mlig455_017641	Neo: - Age: Down-Up-Down	SF3B3	0.966	-	-	-	0.966	-	-	Mlig455_017641 {REF} {Length: 5551} {Pfam: CPSF A subunit region [PF03178.17, score=194.2]} {Human: ENSG00000189091, SF3B3, splicing factor 3b subunit 3, [Score=749, Expect=0.0]} {Mouse: ENSMUSG00000033732, Sf3b3, splicing factor 3b, subunit 3, [Score=750, Expect=0.0]} {Dmel: FBgn0035162, Sf3b3, Splicing factor 3b subunit 3, [Score=667, Expect=0.0]} {Celegans: WBGene00019323, teg-4, Tumorous Enhancer of Glp-1(Gf), [Score=509, Expect=1e-163]} {Smed: dd_Smed_v6_4241_0_1, dd_Smed_v6_4241_0_1, [Score=650, Expect=0.0]} {RNA1509_47059, RNA1509_49748, RNA1509_5382} {RNA1310_2503, RNA1509_47059, RNA1509_49748} {RNA1509_47059, RNA1509_49748, RNA815_4779}
4.	MligTC455_53635	117	2.44	Mlig455_005517	Neo: - Age: Down-Down-Up		0.959	-	-	-	0.959	-	-	Mlig455_005517 {REF} {Length: 1492} {Pfam: Domain of unknown function (DUF4606) [PF15379.8, score=21.9]} {RNA1509_29719} {RNA1310_26435, RNA1509_29719} {RNA1509_29719, RNA815_10531.1}
5.	MligTC455_22977	22	0.47	Mlig455_009569	Neo: - Age: -	CFAP43	0.956	-	-	-	0.956	-	-	Mlig455_009569 {REF} {Length: 5659} {Human: ENSG00000197748, CFAP43, cilia and flagella associated protein 43, [Score=502, Expect=1e-148]} {Mouse: ENSMUSG00000044948, Cfap43, cilia and flagella associated protein 43, [Score=512, Expect=2e-152]} {Dmel: FBgn0036348, CG17687, [Score=101, Expect=4e-21]} {Smed: dd_Smed_v6_10271_0_2, dd_Smed_v6_10271_0_2, [Score=665, Expect=0.0]} {RNA1509_53795} {RNA1310_1696} {RNA815_196.1}