TomoSeq data search

Data search

Results for MligTC455_43713

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43713	5121	106.70	Mlig455_026526, Mlig455_026625	Neo: - Age: -	VPS28	Mlig455_026526 {REF} {Length: 990} {TRANSSPLICED} {Pfam: VPS28 protein [PF03997.14, score=217.8]} {Human: ENSG00000285339, VPS28, VPS28, ESCRT-I subunit, [RH, Score=298, Expect=2e-103]; ENSG00000160948, VPS28, VPS28, ESCRT-I subunit, [RH, Score=298, Expect=2e-103]} {Mouse: ENSMUSG00000115987, Vps28, vacuolar protein sorting 28, [RH, Score=298, Expect=2e-103]} {Dmel: FBgn0021814, Vps28, Vacuolar protein sorting 28, [RH, Score=292, Expect=2e-101]} {Celegans: WBGene00013598, vps-28, Vacuolar protein sorting-associated protein 28 homolog, [RH, Score=197, Expect=6e-64]} {Smed: dd_Smed_v6_2572_0_1, dd_Smed_v6_2572_0_1, [RH, Score=295, Expect=7e-103]} {RNA1509_3624} {RNA1310_31346} {RNA815_15046} Mlig455_026625 {REF} {Length: 1058} {TRANSSPLICED} {Pfam: VPS28 protein [PF03997.14, score=52.3]} {Human: ENSG00000160948, VPS28, VPS28, ESCRT-I subunit, [Score=84.0, Expect=1e-21]; ENSG00000285339, VPS28, VPS28, ESCRT-I subunit, [Score=84.0, Expect=1e-21]} {Mouse: ENSMUSG00000115987, Vps28, vacuolar protein sorting 28, [Score=84.3, Expect=3e-22]} {Dmel: FBgn0021814, Vps28, Vacuolar protein sorting 28, [Score=65.9, Expect=4e-15]} {Celegans: WBGene00013598, vps-28, Vacuolar protein sorting-associated protein 28 homolog, [Score=60.5, Expect=4e-13]} {Smed: dd_Smed_v6_2572_0_1, dd_Smed_v6_2572_0_1, [Score=79.7, Expect=1e-20]} {RNA1509_3624, RNA1509_37600} {RNA1310_31346, RNA1509_3624, RNA1509_37600} {RNA1509_3624, RNA1509_37600, RNA815_15046}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43713

5121

106.70

Mlig455_026526, Mlig455_026625

Neo: -

Age: -

VPS28

Mlig455_026526 {REF} {Length: 990} {TRANSSPLICED} {Pfam: VPS28 protein [PF03997.14, score=217.8]} {Human: ENSG00000285339, VPS28, VPS28, ESCRT-I subunit, [RH, Score=298, Expect=2e-103]; ENSG00000160948, VPS28, VPS28, ESCRT-I subunit, [RH, Score=298, Expect=2e-103]} {Mouse: ENSMUSG00000115987, Vps28, vacuolar protein sorting 28, [RH, Score=298, Expect=2e-103]} {Dmel: FBgn0021814, Vps28, Vacuolar protein sorting 28, [RH, Score=292, Expect=2e-101]} {Celegans: WBGene00013598, vps-28, Vacuolar protein sorting-associated protein 28 homolog, [RH, Score=197, Expect=6e-64]} {Smed: dd_Smed_v6_2572_0_1, dd_Smed_v6_2572_0_1, [RH, Score=295, Expect=7e-103]} {RNA1509_3624} {RNA1310_31346} {RNA815_15046}

Mlig455_026625 {REF} {Length: 1058} {TRANSSPLICED} {Pfam: VPS28 protein [PF03997.14, score=52.3]} {Human: ENSG00000160948, VPS28, VPS28, ESCRT-I subunit, [Score=84.0, Expect=1e-21]; ENSG00000285339, VPS28, VPS28, ESCRT-I subunit, [Score=84.0, Expect=1e-21]} {Mouse: ENSMUSG00000115987, Vps28, vacuolar protein sorting 28, [Score=84.3, Expect=3e-22]} {Dmel: FBgn0021814, Vps28, Vacuolar protein sorting 28, [Score=65.9, Expect=4e-15]} {Celegans: WBGene00013598, vps-28, Vacuolar protein sorting-associated protein 28 homolog, [Score=60.5, Expect=4e-13]} {Smed: dd_Smed_v6_2572_0_1, dd_Smed_v6_2572_0_1, [Score=79.7, Expect=1e-20]} {RNA1509_3624, RNA1509_37600} {RNA1310_31346, RNA1509_3624, RNA1509_37600} {RNA1509_3624, RNA1509_37600, RNA815_15046}

Cumulative graph for MligTC455_43713

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.554	6.826	0.00011	0.03144
RegionR2	0.22	6.826	0.49468	0.87555
RegionR3	0.498	6.826	0.06519	0.45066
RegionR4	0.727	6.826	0.01862	0.09694
RegionR5	0.592	6.826	0.02258	0.10574
RegionR6	0.392	6.826	0.15602	0.70450
RegionR7	-0.263	6.826	0.40960	1.00000
RegionR8	0.388	6.826	0.24432	0.86093

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.907	6.826	0.01691	0.54061
RegenerationR2	0.102	6.826	0.74619	0.97198
RegenerationR3	0.043	6.826	0.89591	1.00000
RegenerationR4	0.166	6.826	0.61952	0.92052
RegenerationR5	0.047	6.826	0.88376	1.00000
RegenerationR6	0.363	6.826	0.27093	0.62141
RegenerationBL	0.312	6.826	0.29851	0.66169
RegenerationTP	0.915	6.826	0.00415	0.10708

Genes with expression patterns similar to MligTC455_43713

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43713	5121	106.7	Mlig455_026526, Mlig455_026625	Neo: - Age: -	VPS28	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026526 {REF} {Length: 990} {TRANSSPLICED} {Pfam: VPS28 protein [PF03997.14, score=217.8]} {Human: ENSG00000285339, VPS28, VPS28, ESCRT-I subunit, [RH, Score=298, Expect=2e-103]; ENSG00000160948, VPS28, VPS28, ESCRT-I subunit, [RH, Score=298, Expect=2e-103]} {Mouse: ENSMUSG00000115987, Vps28, vacuolar protein sorting 28, [RH, Score=298, Expect=2e-103]} {Dmel: FBgn0021814, Vps28, Vacuolar protein sorting 28, [RH, Score=292, Expect=2e-101]} {Celegans: WBGene00013598, vps-28, Vacuolar protein sorting-associated protein 28 homolog, [RH, Score=197, Expect=6e-64]} {Smed: dd_Smed_v6_2572_0_1, dd_Smed_v6_2572_0_1, [RH, Score=295, Expect=7e-103]} {RNA1509_3624} {RNA1310_31346} {RNA815_15046} Mlig455_026625 {REF} {Length: 1058} {TRANSSPLICED} {Pfam: VPS28 protein [PF03997.14, score=52.3]} {Human: ENSG00000160948, VPS28, VPS28, ESCRT-I subunit, [Score=84.0, Expect=1e-21]; ENSG00000285339, VPS28, VPS28, ESCRT-I subunit, [Score=84.0, Expect=1e-21]} {Mouse: ENSMUSG00000115987, Vps28, vacuolar protein sorting 28, [Score=84.3, Expect=3e-22]} {Dmel: FBgn0021814, Vps28, Vacuolar protein sorting 28, [Score=65.9, Expect=4e-15]} {Celegans: WBGene00013598, vps-28, Vacuolar protein sorting-associated protein 28 homolog, [Score=60.5, Expect=4e-13]} {Smed: dd_Smed_v6_2572_0_1, dd_Smed_v6_2572_0_1, [Score=79.7, Expect=1e-20]} {RNA1509_3624, RNA1509_37600} {RNA1310_31346, RNA1509_3624, RNA1509_37600} {RNA1509_3624, RNA1509_37600, RNA815_15046}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts