TomoSeq data search

Data search

Results for MligTC455_43732

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43732	3350	69.80	Mlig455_053387	Neo: - Age: -	GNB4	Mlig455_053387 {REF} {Length: 3780} {Pfam: WD domain, G-beta repeat [PF00400.34, score=142.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.0]; WD40-like domain [PF17005.7, score=19.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=18.3]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [RH, Score=606, Expect=0.0]; ENSG00000172354, GNB2, G protein subunit beta 2, [RH, Score=605, Expect=0.0]; ENSG00000078369, GNB1, G protein subunit beta 1, [RH, Score=601, Expect=0.0]; ENSG00000111664, GNB3, G protein subunit beta 3, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [RH, Score=605, Expect=0.0]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [RH, Score=601, Expect=0.0]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [RH, Score=580, Expect=0.0]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [RH, Score=577, Expect=0.0]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [RH, Score=616, Expect=0.0]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [RH, Score=642, Expect=0.0]} {Smed: dd_Smed_v6_1184_0_1, dd_Smed_v6_1184_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_25644, RNA1509_31950, RNA1509_35699, RNA1509_57880} {RNA1310_3782.1, RNA1509_25644, RNA1509_35699, RNA1509_57880} {RNA1509_25644, RNA1509_35699, RNA1509_57880, RNA815_5807}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_43732

3350

69.80

Mlig455_053387

Neo: -

Age: -

GNB4

Mlig455_053387 {REF} {Length: 3780} {Pfam: WD domain, G-beta repeat [PF00400.34, score=142.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.0]; WD40-like domain [PF17005.7, score=19.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=18.3]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [RH, Score=606, Expect=0.0]; ENSG00000172354, GNB2, G protein subunit beta 2, [RH, Score=605, Expect=0.0]; ENSG00000078369, GNB1, G protein subunit beta 1, [RH, Score=601, Expect=0.0]; ENSG00000111664, GNB3, G protein subunit beta 3, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [RH, Score=605, Expect=0.0]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [RH, Score=601, Expect=0.0]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [RH, Score=580, Expect=0.0]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [RH, Score=577, Expect=0.0]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [RH, Score=616, Expect=0.0]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [RH, Score=642, Expect=0.0]} {Smed: dd_Smed_v6_1184_0_1, dd_Smed_v6_1184_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_25644, RNA1509_31950, RNA1509_35699, RNA1509_57880} {RNA1310_3782.1, RNA1509_25644, RNA1509_35699, RNA1509_57880} {RNA1509_25644, RNA1509_35699, RNA1509_57880, RNA815_5807}

Cumulative graph for MligTC455_43732

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.38	6.191	0.51964	1.00000
RegionR2	0.079	6.191	0.79467	1.00000
RegionR3	-0.129	6.191	0.62525	1.00000
RegionR4	0.57	6.191	0.07513	0.25381
RegionR5	0.163	6.191	0.52598	0.88846
RegionR6	0.403	6.191	0.11719	0.62443
RegionR7	-0.448	6.191	0.15881	0.73609
RegionR8	-0.258	6.191	0.47975	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.06	6.191	0.93967	1.00000
RegenerationR2	-0.353	6.191	0.24459	0.69234
RegenerationR3	-0.258	6.191	0.42552	0.81857
RegenerationR4	-0.3	6.191	0.36652	0.79110
RegenerationR5	-0.276	6.191	0.38040	0.78689
RegenerationR6	-0.344	6.191	0.28529	0.63549
RegenerationBL	0.362	6.191	0.24018	0.59333
RegenerationTP	0.162	6.191	0.64353	0.98519

Genes with expression patterns similar to MligTC455_43732

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43732	3350	69.8	Mlig455_053387	Neo: - Age: -	GNB4	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_053387 {REF} {Length: 3780} {Pfam: WD domain, G-beta repeat [PF00400.34, score=142.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.0]; WD40-like domain [PF17005.7, score=19.5]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=18.3]} {Human: ENSG00000114450, GNB4, G protein subunit beta 4, [RH, Score=606, Expect=0.0]; ENSG00000172354, GNB2, G protein subunit beta 2, [RH, Score=605, Expect=0.0]; ENSG00000078369, GNB1, G protein subunit beta 1, [RH, Score=601, Expect=0.0]; ENSG00000111664, GNB3, G protein subunit beta 3, [RH, Score=580, Expect=0.0]} {Mouse: ENSMUSG00000029713, Gnb2, guanine nucleotide binding protein (G protein), beta 2, [RH, Score=605, Expect=0.0]; ENSMUSG00000029064, Gnb1, guanine nucleotide binding protein (G protein), beta 1, [RH, Score=601, Expect=0.0]; ENSMUSG00000023439, Gnb3, guanine nucleotide binding protein (G protein), beta 3, [RH, Score=580, Expect=0.0]; ENSMUSG00000027669, Gnb4, guanine nucleotide binding protein (G protein), beta 4, [RH, Score=577, Expect=0.0]} {Dmel: FBgn0001105, Gbeta13F, G protein beta-subunit 13F, [RH, Score=616, Expect=0.0]} {Celegans: WBGene00001679, gpb-1, Guanine nucleotide-binding protein subunit beta-1, [RH, Score=642, Expect=0.0]} {Smed: dd_Smed_v6_1184_0_1, dd_Smed_v6_1184_0_1, [RH, Score=653, Expect=0.0]} {RNA1509_25644, RNA1509_31950, RNA1509_35699, RNA1509_57880} {RNA1310_3782.1, RNA1509_25644, RNA1509_35699, RNA1509_57880} {RNA1509_25644, RNA1509_35699, RNA1509_57880, RNA815_5807}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts