Data search
Results for MligTC455_43735
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43735 | 864 | 17.99 | Mlig455_021637 | Neo: - Age: - |
CREB1 | Mlig455_021637 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=53.6]; Basic region leucine zipper [PF07716.17, score=29.1]} {Human: ENSG00000118260, CREB1, cAMP responsive element binding protein 1, [Score=74.7, Expect=7e-16]; ENSG00000095794, CREM, cAMP responsive element modulator, [Score=74.3, Expect=1e-15]} {Mouse: ENSMUSG00000025958, Creb1, cAMP responsive element binding protein 1, [Score=74.7, Expect=5e-16]; ENSMUSG00000063889, Crem, cAMP responsive element modulator, [Score=74.3, Expect=7e-16]} {Dmel: FBgn0265784, CrebB, Cyclic-AMP response element binding protein B, [RH, Score=74.7, Expect=3e-16]} {Celegans: WBGene00000793, crh-1, CREB Homolog; Cyclic AMP-response element binding protein 1 gamma 2, [Score=70.9, Expect=1e-15]} {Smed: dd_Smed_v6_4685_0_1, dd_Smed_v6_4685_0_1, [Score=58.2, Expect=2e-10]} {RNA1509_17819, RNA1509_26889, RNA1509_47574, RNA1509_48377, RNA1509_55054} {RNA1310_33343, RNA1509_17819, RNA1509_26889, RNA1509_47574, RNA1509_48377, RNA1509_55054} {RNA1509_17819, RNA1509_26889, RNA1509_47574, RNA1509_48377, RNA1509_55054, RNA815_16621} |
Cumulative graph for MligTC455_43735
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.967 | 4.289 | 0.35130 | 0.99458 | |
| RegionR2 | -0.628 | 4.289 | 0.15789 | 0.49713 | |
| RegionR3 | 0.168 | 4.289 | 0.63013 | 1.00000 | |
| RegionR4 | 0.244 | 4.289 | 0.56834 | 0.88673 | |
| RegionR5 | 0.414 | 4.289 | 0.20826 | 0.50306 | |
| RegionR6 | 0.713 | 4.289 | 0.03682 | 0.35837 | |
| RegionR7 | -0.169 | 4.289 | 0.71099 | 1.00000 | |
| RegionR8 | 0.224 | 4.289 | 0.65587 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.497 | 4.289 | 0.72124 | 1.00000 | |
| RegenerationR2 | 0.341 | 4.289 | 0.37166 | 0.79697 | |
| RegenerationR3 | -0.547 | 4.289 | 0.18184 | 0.61852 | |
| RegenerationR4 | -0.112 | 4.289 | 0.79076 | 0.98408 | |
| RegenerationR5 | 0.047 | 4.289 | 0.90229 | 1.00000 | |
| RegenerationR6 | -0.455 | 4.289 | 0.25614 | 0.60637 | |
| RegenerationBL | -1.229 | 4.289 | 0.02029 | 0.15423 | |
| RegenerationTP | -0.273 | 4.289 | 0.58320 | 0.95190 |
Genes with expression patterns similar to MligTC455_43735
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43735 | 864 | 17.99 | Mlig455_021637 | Neo: - Age: - |
CREB1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021637 {REF} {Length: 2484} {TRANSSPLICED} {Pfam: bZIP transcription factor [PF00170.23, score=53.6]; Basic region leucine zipper [PF07716.17, score=29.1]} {Human: ENSG00000118260, CREB1, cAMP responsive element binding protein 1, [Score=74.7, Expect=7e-16]; ENSG00000095794, CREM, cAMP responsive element modulator, [Score=74.3, Expect=1e-15]} {Mouse: ENSMUSG00000025958, Creb1, cAMP responsive element binding protein 1, [Score=74.7, Expect=5e-16]; ENSMUSG00000063889, Crem, cAMP responsive element modulator, [Score=74.3, Expect=7e-16]} {Dmel: FBgn0265784, CrebB, Cyclic-AMP response element binding protein B, [RH, Score=74.7, Expect=3e-16]} {Celegans: WBGene00000793, crh-1, CREB Homolog; Cyclic AMP-response element binding protein 1 gamma 2, [Score=70.9, Expect=1e-15]} {Smed: dd_Smed_v6_4685_0_1, dd_Smed_v6_4685_0_1, [Score=58.2, Expect=2e-10]} {RNA1509_17819, RNA1509_26889, RNA1509_47574, RNA1509_48377, RNA1509_55054} {RNA1310_33343, RNA1509_17819, RNA1509_26889, RNA1509_47574, RNA1509_48377, RNA1509_55054} {RNA1509_17819, RNA1509_26889, RNA1509_47574, RNA1509_48377, RNA1509_55054, RNA815_16621} |
| 2. | MligTC455_42330 | 643 | 13.39 | Mlig455_038720 | Neo: - Age: - |
1.735 | 0.774 | - | - | - | - | 0.961 | Mlig455_038720 {REF} {Length: 2853} {Smed: dd_Smed_v6_6469_0_1, dd_Smed_v6_6469_0_1, [RH, Score=166, Expect=2e-45]} {RNA1509_22744} {RNA1310_6583.1} {RNA815_5360.1} | |
| 3. | MligTC455_34473 | 598 | 12.47 | Mlig455_036863, Mlig455_053003, Mlig455_053063 | Neo: - Age: - Region-enriched R4: 2.292/0.01294 |
0.975 | - | - | - | 0.975 | - | - | Mlig455_036863 {REF} {Length: 1169} {RNA1509_37218} {RNA1310_6141} {RNA815_9194.1} Mlig455_053003 {REF} {Length: 1917} {RNA1509_37218} {RNA1310_6141, RNA1509_37218} {RNA1509_37218, RNA815_9194.1} Mlig455_053063 {REF} {Length: 1376} {RNA1509_37218} {RNA1310_6141} {RNA815_9194.1} |
|
| 4. | MligTC455_40745 | 906 | 18.88 | Mlig455_047848, Mlig455_047918 | Neo: - Age: Up-Down-Down |
TTPAL | 0.962 | - | - | - | - | - | 0.962 | Mlig455_047848 {REF} {Length: 4283} {TRANSSPLICED} {Pfam: CRAL/TRIO domain [PF00650.22, score=77.6]; CRAL/TRIO, N-terminal domain [PF03765.17, score=22.8]} {Human: ENSG00000124120, TTPAL, alpha tocopherol transfer protein like, [RH, Score=135, Expect=2e-36]} {Mouse: ENSMUSG00000017679, Ttpal, tocopherol (alpha) transfer protein-like, [RH, Score=139, Expect=4e-38]; ENSMUSG00000039194, Rlbp1, retinaldehyde binding protein 1, [RH, Score=133, Expect=9e-36]} {Dmel: FBgn0036289, CG10657, [Score=125, Expect=4e-33]} {RNA1509_23560} {RNA1310_23879} {RNA815_11361} Mlig455_047918 {REF} {Length: 4039} {TRANSSPLICED} {Pfam: CRAL/TRIO domain [PF00650.22, score=77.6]; CRAL/TRIO, N-terminal domain [PF03765.17, score=22.8]} {Human: ENSG00000124120, TTPAL, alpha tocopherol transfer protein like, [RH, Score=135, Expect=2e-36]} {Mouse: ENSMUSG00000017679, Ttpal, tocopherol (alpha) transfer protein-like, [RH, Score=139, Expect=4e-38]; ENSMUSG00000039194, Rlbp1, retinaldehyde binding protein 1, [RH, Score=133, Expect=9e-36]} {Dmel: FBgn0036289, CG10657, [Score=125, Expect=4e-33]} {RNA1509_23560} {RNA1310_23879, RNA1509_23560} {RNA1509_23560, RNA815_11361} |
Berezikov Lab - 2020-2021 © ERIBA