TomoSeq data search

Data search

Results for MligTC455_43737

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43737	1882	39.20	Mlig455_006129	Neo: - Age: -	PRKACA	Mlig455_006129 {REF} {Length: 1939} {Pfam: Protein kinase domain [PF00069.27, score=239.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.0]; Kinase-like [PF14531.8, score=27.9]} {Human: ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [RH, Score=613, Expect=0.0]; ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [RH, Score=611, Expect=0.0]; ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [RH, Score=593, Expect=0.0]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [RH, Score=607, Expect=0.0]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2413_0_1, dd_Smed_v6_2413_0_1, [RH, Score=624, Expect=0.0]} {RNA1509_54270} {RNA1310_14451.1} {RNA815_9447.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43737

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.72	5.397	0.26898	0.91977
RegionR2	0.242	5.397	0.52572	0.89859
RegionR3	0.618	5.397	0.04188	0.35690
RegionR4	0.356	5.397	0.31463	0.63029
RegionR5	-0.129	5.397	0.67146	1.00000
RegionR6	-0.29	5.397	0.39250	0.96689
RegionR7	-0.583	5.397	0.18092	0.77834
RegionR8	-0.933	5.397	0.10374	0.60202

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.575	5.397	0.49685	1.00000
RegenerationR2	-0.404	5.397	0.26726	0.71296
RegenerationR3	0.145	5.397	0.70041	0.94763
RegenerationR4	0.267	5.397	0.48405	0.86059
RegenerationR5	0.72	5.397	0.05220	0.36791
RegenerationR6	0.779	5.397	0.04715	0.27171
RegenerationBL	0.544	5.397	0.19904	0.53667
RegenerationTP	0.652	5.397	0.18227	0.61812

Genes with expression patterns similar to MligTC455_43737

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43737	1882	39.2	Mlig455_006129	Neo: - Age: -	PRKACA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_006129 {REF} {Length: 1939} {Pfam: Protein kinase domain [PF00069.27, score=239.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.0]; Kinase-like [PF14531.8, score=27.9]} {Human: ENSG00000072062, PRKACA, protein kinase cAMP-activated catalytic subunit alpha, [RH, Score=613, Expect=0.0]; ENSG00000142875, PRKACB, protein kinase cAMP-activated catalytic subunit beta, [RH, Score=603, Expect=0.0]} {Mouse: ENSMUSG00000005469, Prkaca, protein kinase, cAMP dependent, catalytic, alpha, [RH, Score=611, Expect=0.0]; ENSMUSG00000005034, Prkacb, protein kinase, cAMP dependent, catalytic, beta, [RH, Score=593, Expect=0.0]} {Dmel: FBgn0000273, Pka-C1, Protein kinase, cAMP-dependent, catalytic subunit 1, [RH, Score=607, Expect=0.0]} {Celegans: WBGene00002189, kin-1, cAMP-dependent protein kinase catalytic subunit, [RH, Score=627, Expect=0.0]} {Smed: dd_Smed_v6_2413_0_1, dd_Smed_v6_2413_0_1, [RH, Score=624, Expect=0.0]} {RNA1509_54270} {RNA1310_14451.1} {RNA815_9447.1}
2.	MligTC455_38145	319	6.64	Mlig455_027088	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_027088 {REF} {Length: 749} {NoTransDecoderORF} {RNA1509_26189} {RNA1310_61517} {RNA815_34488}
3.	MligTC455_38144	804	16.75	Mlig455_026931, Mlig455_026937, Mlig455_027025	Neo: - Age: Up-Down-Down	KLC1, KLC4	0.952	-	-	0.952	-	-	-	Mlig455_026931 {REF} {Length: 4511} {Pfam: Tetratricopeptide repeat [PF13424.8, score=153.5]; Tetratricopeptide repeat [PF13374.8, score=140.5]; Tetratricopeptide repeat [PF13176.8, score=80.9]; Tetratricopeptide repeat [PF00515.30, score=74.2]; Tetratricopeptide repeat [PF07719.19, score=56.7]; Tetratricopeptide repeat [PF13181.8, score=45.0]; MalT-like TPR region [PF17874.3, score=29.3]; Tetratricopeptide repeat [PF13431.8, score=25.7]; PPR repeat [PF01535.22, score=24.8]; Tetratricopeptide repeat [PF13428.8, score=22.1]; Tetratricopeptide repeat [PF14559.8, score=21.2]; Soluble NSF attachment protein, SNAP [PF14938.8, score=18.9]} {Human: ENSG00000126214, KLC1, kinesin light chain 1, [Score=291, Expect=7e-92]; ENSG00000137171, KLC4, kinesin light chain 4, [Score=290, Expect=1e-92]; ENSG00000174996, KLC2, kinesin light chain 2, [Score=287, Expect=1e-91]; ENSG00000256500, AL139300.1, novel protein, [Score=287, Expect=1e-89]} {Mouse: ENSMUSG00000021288, Klc1, kinesin light chain 1, [Score=288, Expect=1e-91]; ENSMUSG00000024862, Klc2, kinesin light chain 2, [Score=286, Expect=1e-90]; ENSMUSG00000003546, Klc4, kinesin light chain 4, [Score=280, Expect=4e-88]} {Dmel: FBgn0010235, Klc, Kinesin light chain, [Score=286, Expect=7e-92]} {Celegans: WBGene00002215, klc-2, Kinesin light chain, [Score=294, Expect=1e-94]} {Smed: dd_Smed_v6_8806_0_2, dd_Smed_v6_8806_0_2, [Score=285, Expect=1e-91]} {RNA1509_6814} {RNA1310_9822} {RNA815_24504} Mlig455_026937 {REF} {Length: 5085} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=223.6]; Tetratricopeptide repeat [PF13374.8, score=189.5]; Tetratricopeptide repeat [PF13176.8, score=101.1]; Tetratricopeptide repeat [PF00515.30, score=81.2]; Tetratricopeptide repeat [PF07719.19, score=68.0]; Tetratricopeptide repeat [PF13181.8, score=53.1]; MalT-like TPR region [PF17874.3, score=45.3]; Tetratricopeptide repeat [PF07721.16, score=40.2]; Tetratricopeptide repeat [PF13428.8, score=39.8]; Tetratricopeptide repeat [PF13432.8, score=38.1]; Tetratricopeptide repeat [PF14559.8, score=33.2]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=25.8]; PPR repeat [PF01535.22, score=23.1]; Tetratricopeptide repeat [PF13431.8, score=22.4]; Soluble NSF attachment protein, SNAP [PF14938.8, score=20.5]} {Human: ENSG00000137171, KLC4, kinesin light chain 4, [RH, Score=523, Expect=6e-178]; ENSG00000126214, KLC1, kinesin light chain 1, [RH, Score=517, Expect=9e-176]; ENSG00000256500, AL139300.1, novel protein, [RH, Score=514, Expect=3e-173]; ENSG00000174996, KLC2, kinesin light chain 2, [RH, Score=509, Expect=1e-172]} {Mouse: ENSMUSG00000021288, Klc1, kinesin light chain 1, [RH, Score=513, Expect=2e-175]; ENSMUSG00000024862, Klc2, kinesin light chain 2, [RH, Score=511, Expect=9e-174]; ENSMUSG00000003546, Klc4, kinesin light chain 4, [RH, Score=491, Expect=9e-166]} {Dmel: FBgn0010235, Klc, Kinesin light chain, [RH, Score=500, Expect=6e-171]} {Celegans: WBGene00002215, klc-2, Kinesin light chain, [RH, Score=497, Expect=9e-170]} {Smed: dd_Smed_v6_8806_0_1, dd_Smed_v6_8806_0_1, [RH, Score=520, Expect=3e-178]} {RNA1509_6814} {RNA1310_9822, RNA1509_6814} {RNA1509_6814, RNA815_7806} Mlig455_027025 {REF} {Length: 6219} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=176.6]; Tetratricopeptide repeat [PF13374.8, score=160.8]; Tetratricopeptide repeat [PF13176.8, score=88.8]; Tetratricopeptide repeat [PF00515.30, score=78.0]; Tetratricopeptide repeat [PF07719.19, score=62.5]; Tetratricopeptide repeat [PF13181.8, score=48.2]; Tetratricopeptide repeat [PF07721.16, score=37.1]; Tetratricopeptide repeat [PF13428.8, score=35.4]; Tetratricopeptide repeat [PF13432.8, score=33.6]; Tetratricopeptide repeat [PF14559.8, score=27.6]; MalT-like TPR region [PF17874.3, score=26.0]; Soluble NSF attachment protein, SNAP [PF14938.8, score=24.2]; Tetratricopeptide repeat [PF13431.8, score=23.3]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=23.2]; PPR repeat [PF01535.22, score=22.7]} {Human: ENSG00000137171, KLC4, kinesin light chain 4, [Score=418, Expect=3e-137]; ENSG00000126214, KLC1, kinesin light chain 1, [Score=408, Expect=4e-134]; ENSG00000174996, KLC2, kinesin light chain 2, [Score=406, Expect=9e-133]; ENSG00000256500, AL139300.1, novel protein, [Score=406, Expect=2e-131]} {Mouse: ENSMUSG00000024862, Klc2, kinesin light chain 2, [Score=407, Expect=2e-133]; ENSMUSG00000021288, Klc1, kinesin light chain 1, [Score=404, Expect=4e-133]; ENSMUSG00000003546, Klc4, kinesin light chain 4, [Score=395, Expect=7e-129]} {Dmel: FBgn0010235, Klc, Kinesin light chain, [Score=390, Expect=2e-128]} {Celegans: WBGene00002215, klc-2, Kinesin light chain, [Score=390, Expect=1e-128]} {Smed: dd_Smed_v6_8806_0_2, dd_Smed_v6_8806_0_2, [Score=407, Expect=2e-135]} {RNA1509_6814} {RNA1310_9822} {RNA815_7806}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43737

1882

39.2

Mlig455_006129

Neo: -

Age: -

PRKACA

1.000

MligTC455_38145

319

6.64

Mlig455_027088

Neo: -

Age: -

0.96

0.960

Mlig455_027088 {REF} {Length: 749} {NoTransDecoderORF} {RNA1509_26189} {RNA1310_61517} {RNA815_34488}

MligTC455_38144

804

16.75

Mlig455_026931, Mlig455_026937, Mlig455_027025

Neo: -

Age: Up-Down-Down

KLC1, KLC4

0.952

Mlig455_026931 {REF} {Length: 4511} {Pfam: Tetratricopeptide repeat [PF13424.8, score=153.5]; Tetratricopeptide repeat [PF13374.8, score=140.5]; Tetratricopeptide repeat [PF13176.8, score=80.9]; Tetratricopeptide repeat [PF00515.30, score=74.2]; Tetratricopeptide repeat [PF07719.19, score=56.7]; Tetratricopeptide repeat [PF13181.8, score=45.0]; MalT-like TPR region [PF17874.3, score=29.3]; Tetratricopeptide repeat [PF13431.8, score=25.7]; PPR repeat [PF01535.22, score=24.8]; Tetratricopeptide repeat [PF13428.8, score=22.1]; Tetratricopeptide repeat [PF14559.8, score=21.2]; Soluble NSF attachment protein, SNAP [PF14938.8, score=18.9]} {Human: ENSG00000126214, KLC1, kinesin light chain 1, [Score=291, Expect=7e-92]; ENSG00000137171, KLC4, kinesin light chain 4, [Score=290, Expect=1e-92]; ENSG00000174996, KLC2, kinesin light chain 2, [Score=287, Expect=1e-91]; ENSG00000256500, AL139300.1, novel protein, [Score=287, Expect=1e-89]} {Mouse: ENSMUSG00000021288, Klc1, kinesin light chain 1, [Score=288, Expect=1e-91]; ENSMUSG00000024862, Klc2, kinesin light chain 2, [Score=286, Expect=1e-90]; ENSMUSG00000003546, Klc4, kinesin light chain 4, [Score=280, Expect=4e-88]} {Dmel: FBgn0010235, Klc, Kinesin light chain, [Score=286, Expect=7e-92]} {Celegans: WBGene00002215, klc-2, Kinesin light chain, [Score=294, Expect=1e-94]} {Smed: dd_Smed_v6_8806_0_2, dd_Smed_v6_8806_0_2, [Score=285, Expect=1e-91]} {RNA1509_6814} {RNA1310_9822} {RNA815_24504}

Mlig455_026937 {REF} {Length: 5085} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=223.6]; Tetratricopeptide repeat [PF13374.8, score=189.5]; Tetratricopeptide repeat [PF13176.8, score=101.1]; Tetratricopeptide repeat [PF00515.30, score=81.2]; Tetratricopeptide repeat [PF07719.19, score=68.0]; Tetratricopeptide repeat [PF13181.8, score=53.1]; MalT-like TPR region [PF17874.3, score=45.3]; Tetratricopeptide repeat [PF07721.16, score=40.2]; Tetratricopeptide repeat [PF13428.8, score=39.8]; Tetratricopeptide repeat [PF13432.8, score=38.1]; Tetratricopeptide repeat [PF14559.8, score=33.2]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=25.8]; PPR repeat [PF01535.22, score=23.1]; Tetratricopeptide repeat [PF13431.8, score=22.4]; Soluble NSF attachment protein, SNAP [PF14938.8, score=20.5]} {Human: ENSG00000137171, KLC4, kinesin light chain 4, [RH, Score=523, Expect=6e-178]; ENSG00000126214, KLC1, kinesin light chain 1, [RH, Score=517, Expect=9e-176]; ENSG00000256500, AL139300.1, novel protein, [RH, Score=514, Expect=3e-173]; ENSG00000174996, KLC2, kinesin light chain 2, [RH, Score=509, Expect=1e-172]} {Mouse: ENSMUSG00000021288, Klc1, kinesin light chain 1, [RH, Score=513, Expect=2e-175]; ENSMUSG00000024862, Klc2, kinesin light chain 2, [RH, Score=511, Expect=9e-174]; ENSMUSG00000003546, Klc4, kinesin light chain 4, [RH, Score=491, Expect=9e-166]} {Dmel: FBgn0010235, Klc, Kinesin light chain, [RH, Score=500, Expect=6e-171]} {Celegans: WBGene00002215, klc-2, Kinesin light chain, [RH, Score=497, Expect=9e-170]} {Smed: dd_Smed_v6_8806_0_1, dd_Smed_v6_8806_0_1, [RH, Score=520, Expect=3e-178]} {RNA1509_6814} {RNA1310_9822, RNA1509_6814} {RNA1509_6814, RNA815_7806}

Mlig455_027025 {REF} {Length: 6219} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF13424.8, score=176.6]; Tetratricopeptide repeat [PF13374.8, score=160.8]; Tetratricopeptide repeat [PF13176.8, score=88.8]; Tetratricopeptide repeat [PF00515.30, score=78.0]; Tetratricopeptide repeat [PF07719.19, score=62.5]; Tetratricopeptide repeat [PF13181.8, score=48.2]; Tetratricopeptide repeat [PF07721.16, score=37.1]; Tetratricopeptide repeat [PF13428.8, score=35.4]; Tetratricopeptide repeat [PF13432.8, score=33.6]; Tetratricopeptide repeat [PF14559.8, score=27.6]; MalT-like TPR region [PF17874.3, score=26.0]; Soluble NSF attachment protein, SNAP [PF14938.8, score=24.2]; Tetratricopeptide repeat [PF13431.8, score=23.3]; Anaphase-promoting complex, cyclosome, subunit 3 [PF12895.9, score=23.2]; PPR repeat [PF01535.22, score=22.7]} {Human: ENSG00000137171, KLC4, kinesin light chain 4, [Score=418, Expect=3e-137]; ENSG00000126214, KLC1, kinesin light chain 1, [Score=408, Expect=4e-134]; ENSG00000174996, KLC2, kinesin light chain 2, [Score=406, Expect=9e-133]; ENSG00000256500, AL139300.1, novel protein, [Score=406, Expect=2e-131]} {Mouse: ENSMUSG00000024862, Klc2, kinesin light chain 2, [Score=407, Expect=2e-133]; ENSMUSG00000021288, Klc1, kinesin light chain 1, [Score=404, Expect=4e-133]; ENSMUSG00000003546, Klc4, kinesin light chain 4, [Score=395, Expect=7e-129]} {Dmel: FBgn0010235, Klc, Kinesin light chain, [Score=390, Expect=2e-128]} {Celegans: WBGene00002215, klc-2, Kinesin light chain, [Score=390, Expect=1e-128]} {Smed: dd_Smed_v6_8806_0_2, dd_Smed_v6_8806_0_2, [Score=407, Expect=2e-135]} {RNA1509_6814} {RNA1310_9822} {RNA815_7806}