Data search


search
Exact
Search

Results for MligTC455_43746

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43746 2201 45.86 Mlig455_038873, Mlig455_055373, Mlig455_061572, Mlig455_063836

Neo: -

Age: logFC(26M/2M)=0.254

Region-enriched R3: 1.298/0.03650

PPP1R3C

Mlig455_038873 {REF} {Length: 3133} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=71.1]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=54.2]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=109, Expect=3e-26]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=96.7, Expect=3e-22]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [RH, Score=111, Expect=4e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=100, Expect=5e-24]} {RNA1509_5579} {RNA1310_11550.1, RNA1509_5579} {RNA1509_5579, RNA815_6432}

Mlig455_055373 {REF} {Length: 1902} {RNA1509_5579} {RNA1310_11550.1} {RNA815_1822}

Mlig455_061572 {REF} {Length: 3119} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=71.2]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=54.2]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=109, Expect=3e-26]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=96.7, Expect=3e-22]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [RH, Score=110, Expect=7e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=105, Expect=7e-25]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=100, Expect=4e-24]} {RNA1509_5579} {RNA1310_11550.1} {RNA815_6432}

Mlig455_063836 {REF} {Length: 3115} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=70.1]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=52.9]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=108, Expect=6e-26]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=96.3, Expect=5e-22]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [Score=109, Expect=1e-26]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=104, Expect=1e-24]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=100, Expect=6e-24]} {RNA1509_5579} {RNA1310_11550.1} {RNA815_6432}

Cumulative graph for MligTC455_43746

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.108 5.738 0.00826 0.26994
RegionR2 0.099 5.738 0.84767 1.00000
RegionR3 1.298 5.738 0.00132 0.03650
RegionR4 1.152 5.738 0.01750 0.09255
RegionR5 0.591 5.738 0.15677 0.41540
RegionR6 0.377 5.738 0.39132 0.96541
RegionR7 -0.413 5.738 0.43919 1.00000
RegionR8 0.003 5.738 0.99207 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.985 5.738 0.57472 1.00000
RegenerationR2 0.657 5.738 0.16119 0.59857
RegenerationR3 0.427 5.738 0.38382 0.79221
RegenerationR4 1.024 5.738 0.04717 0.35065
RegenerationR5 1.111 5.738 0.02180 0.25493
RegenerationR6 1.222 5.738 0.01370 0.14427
RegenerationBL 0.006 5.738 0.99002 1.00000
RegenerationTP 0.313 5.738 0.55410 0.93597


Genes with expression patterns similar to MligTC455_43746

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43746 2201 45.86 Mlig455_038873, Mlig455_055373, Mlig455_061572, Mlig455_063836

Neo: -

Age: logFC(26M/2M)=0.254

Region-enriched R3: 1.298/0.03650

PPP1R3C 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_038873 {REF} {Length: 3133} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=71.1]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=54.2]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=109, Expect=3e-26]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=96.7, Expect=3e-22]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [RH, Score=111, Expect=4e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=100, Expect=5e-24]} {RNA1509_5579} {RNA1310_11550.1, RNA1509_5579} {RNA1509_5579, RNA815_6432}

Mlig455_055373 {REF} {Length: 1902} {RNA1509_5579} {RNA1310_11550.1} {RNA815_1822}

Mlig455_061572 {REF} {Length: 3119} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=71.2]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=54.2]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=109, Expect=3e-26]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=96.7, Expect=3e-22]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [RH, Score=110, Expect=7e-27]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=105, Expect=7e-25]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=100, Expect=4e-24]} {RNA1509_5579} {RNA1310_11550.1} {RNA815_6432}

Mlig455_063836 {REF} {Length: 3115} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=70.1]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=52.9]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=108, Expect=6e-26]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=96.3, Expect=5e-22]} {Dmel: FBgn0036428, Gbs-70E, Glycogen binding subunit 70E, [Score=109, Expect=1e-26]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=104, Expect=1e-24]} {Smed: dd_Smed_v6_4959_0_1, dd_Smed_v6_4959_0_1, [Score=100, Expect=6e-24]} {RNA1509_5579} {RNA1310_11550.1} {RNA815_6432}
2. MligTC455_24046 1123 23.4 Mlig455_016820, Mlig455_065958

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=0.851

TUB 1.801 0.841 - - 0.960 - -

Mlig455_016820 {REF} {Length: 3829} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=286.1]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [RH, Score=390, Expect=3e-129]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [RH, Score=387, Expect=1e-128]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [RH, Score=368, Expect=8e-122]} {Dmel: FBgn0015721, ktub, king tubby, [RH, Score=364, Expect=3e-120]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [RH, Score=318, Expect=3e-103]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [RH, Score=402, Expect=1e-135]} {RNA1509_7281} {RNA1310_3349.1, RNA1509_7281} {RNA1509_7281, RNA815_2090.1}

Mlig455_065958 {REF} {Length: 3977} {TRANSSPLICED} {Pfam: Tub family [PF01167.20, score=286.1]} {Human: ENSG00000166402, TUB, tubby bipartite transcription factor, [RH, Score=390, Expect=2e-129]} {Mouse: ENSMUSG00000031028, Tub, tubby bipartite transcription factor, [RH, Score=388, Expect=7e-129]; ENSMUSG00000001521, Tulp3, tubby-like protein 3, [RH, Score=369, Expect=4e-122]} {Dmel: FBgn0015721, ktub, king tubby, [RH, Score=365, Expect=1e-120]} {Celegans: WBGene00006655, tub-1, Tubby protein homolog 1, [RH, Score=319, Expect=2e-103]} {Smed: dd_Smed_v6_11228_0_1, dd_Smed_v6_11228_0_1, [RH, Score=403, Expect=4e-136]} {RNA1509_7281} {RNA1310_3349.1} {RNA815_2090.1}
3. MligTC455_42826 529 11.02 Mlig455_008264

Neo: -

Age: logFC(26M/2M)=0.618

Region-enriched R4: 1.475/0.02452

WDR26 1.695 - - - 0.734 0.961 - Mlig455_008264 {REF} {Length: 3439} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=63.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=36.6]} {Human: ENSG00000162923, WDR26, WD repeat domain 26, [RH, Score=418, Expect=3e-138]} {Mouse: ENSMUSG00000038733, Wdr26, WD repeat domain 26, [RH, Score=427, Expect=2e-142]} {Dmel: FBgn0037094, CG7611, [RH, Score=392, Expect=9e-129]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=68.6, Expect=4e-12]} {Smed: dd_Smed_v6_6611_0_1, dd_Smed_v6_6611_0_1, [RH, Score=228, Expect=8e-66]} {RNA1509_20107, RNA1509_44344, RNA1509_54584} {RNA1310_14508.1, RNA1509_20107, RNA1509_44344, RNA1509_54584} {RNA1509_20107, RNA1509_44344, RNA1509_54584, RNA815_16830}
4. MligTC455_48725 712 14.84 Mlig455_040273

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.633/0.01961

0.955 - - - - - 0.955 Mlig455_040273 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_31884} {RNA1310_19097} {RNA815_6565}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA