Data search


search
Exact
Search

Results for MligTC455_43827

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43827 56 1.17 Mlig455_053450

Neo: -

Age: -

GALNT11 Mlig455_053450 {REF} {Length: 2290} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=79.0]} {Human: ENSG00000178234, GALNT11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=129, Expect=1e-33]; ENSG00000136542, GALNT5, polypeptide N-acetylgalactosaminyltransferase 5, [Score=124, Expect=2e-31]} {Mouse: ENSMUSG00000038072, Galnt11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=139, Expect=5e-37]} {Dmel: FBgn0051956, pgant4, polypeptide GalNAc transferase 4, [Score=120, Expect=1e-30]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=122, Expect=2e-31]} {Smed: dd_Smed_v6_6094_0_2, dd_Smed_v6_6094_0_2, [Score=124, Expect=4e-33]} {RNA1509_48506} {RNA1310_16435} {RNA815_21659}

Cumulative graph for MligTC455_43827

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.076 1.558 1.00000 1.00000
RegionR2 3.759 1.558 0.01095 0.10641
RegionR3 0.79 1.558 0.51072 0.99930
RegionR4 -1.119 1.558 0.94461 1.00000
RegionR5 1.047 1.558 0.38395 0.73882
RegionR6 2.281 1.558 0.05916 0.45633
RegionR7 1.256 1.558 0.44835 1.00000
RegionR8 -2.939 1.558 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.145 1.558 1.00000 1.00000
RegenerationR2 0.986 1.558 0.27319 0.71858
RegenerationR3 2.838 1.558 0.01181 0.19866
RegenerationR4 3.404 1.558 0.00650 0.11616
RegenerationR5 2.493 1.558 0.00520 0.13085
RegenerationR6 1.479 1.558 0.16942 0.50044
RegenerationBL -0.633 1.558 1.00000 1.00000
RegenerationTP 2.707 1.558 0.32876 0.77323


Genes with expression patterns similar to MligTC455_43827

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43827 56 1.17 Mlig455_053450

Neo: -

Age: -

GALNT11 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_053450 {REF} {Length: 2290} {TRANSSPLICED} {Pfam: Glycosyl transferase family 2 [PF00535.28, score=79.0]} {Human: ENSG00000178234, GALNT11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=129, Expect=1e-33]; ENSG00000136542, GALNT5, polypeptide N-acetylgalactosaminyltransferase 5, [Score=124, Expect=2e-31]} {Mouse: ENSMUSG00000038072, Galnt11, polypeptide N-acetylgalactosaminyltransferase 11, [Score=139, Expect=5e-37]} {Dmel: FBgn0051956, pgant4, polypeptide GalNAc transferase 4, [Score=120, Expect=1e-30]} {Celegans: WBGene00001630, gly-5, Polypeptide N-acetylgalactosaminyltransferase 5, [Score=122, Expect=2e-31]} {Smed: dd_Smed_v6_6094_0_2, dd_Smed_v6_6094_0_2, [Score=124, Expect=4e-33]} {RNA1509_48506} {RNA1310_16435} {RNA815_21659}
2. MligTC455_40822 53 1.1 Mlig455_041922

Neo: -

Age: Down-Up-Down

Region-enriched R5: 3.132/0.04294

PARPBP 0.974 - - - - 0.974 - Mlig455_041922 {REF} {Length: 3695} {Human: ENSG00000185480, PARPBP, PARP1 binding protein, [RH, Score=77.8, Expect=2e-15]} {Mouse: ENSMUSG00000035365, Parpbp, PARP1 binding protein, [RH, Score=79.3, Expect=4e-15]} {Smed: dd_Smed_v6_34200_0_1, dd_Smed_v6_34200_0_1, [RH, Score=81.3, Expect=3e-16]} {RNA1509_46952} {RNA1310_6393.1} {RNA815_2577.1}
3. MligTC455_02590 19 0.4 Mlig455_027316

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.490

MX2 0.972 - - - - 0.972 - Mlig455_027316 {REF} {Length: 3400} {Pfam: Dynamin central region [PF01031.22, score=151.8]; Family with sequence similarity 184, A and B [PF15665.7, score=21.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=124, Expect=6e-31]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=121, Expect=3e-30]} {RNA1509_19894} {RNA1310_7243} {RNA815_3194}
4. MligTC455_19140 60 1.26 Mlig455_066174

Neo: -

Age: -

FAM187A 0.971 - - - 0.971 - - Mlig455_066174 {REF} {Length: 1525} {Pfam: Dynein attachment factor N-terminus [PF15867.7, score=94.3]; Potential Monad-binding region of RPAP3 [PF13877.8, score=58.9]} {Human: ENSG00000214447, FAM187A, family with sequence similarity 187 member A, [RH, Score=103, Expect=3e-26]; ENSG00000167131, CCDC103, coiled-coil domain containing 103, [RH, Score=103, Expect=3e-26]} {Mouse: ENSMUSG00000020930, Ccdc103, coiled-coil domain containing 103, [RH, Score=111, Expect=1e-29]} {Dmel: FBgn0033623, CG13202, [RH, Score=47.0, Expect=4e-07]} {Smed: dd_Smed_v6_14131_0_1, dd_Smed_v6_14131_0_1, [RH, Score=85.9, Expect=2e-20]} {RNA1509_44514} {RNA1310_34867.1} {RNA815_14846}
5. MligTC455_46404 36 0.74 Mlig455_031747

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_031747 {REF} {Length: 613} {TRANSSPLICED} {RNA1310_50941.2} {RNA815_26807}
6. MligTC455_35047 20 0.43 Mlig455_062141

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_062141 {REF} {Length: 1939} {RNA1509_55109} {RNA1310_32162} {RNA815_55266}
7. MligTC455_27841 1118 23.3 Mlig455_021442, Mlig455_037900

Neo: -

Age: -

Regeneration-upregulated BL: 4.099

Regeneration-enriched BL: 4.099

0.951 0.951 - - - - -

Mlig455_021442 {REF} {Length: 2929} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}

Mlig455_037900 {REF} {Length: 3423} {Pfam: Zinc knuckle [PF00098.25, score=20.8]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA