M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_43842

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43842 2687 55.98 Mlig455_023470, Mlig455_068133, Mlig455_068149

Neo: -

Age: -

 HOGA1

Mlig455_023470 {REF} {Length: 2193} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=194.7]} {Human: ENSG00000241935, HOGA1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=275, Expect=3e-91]} {Mouse: ENSMUSG00000025176, Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=258, Expect=8e-85]} {RNA1509_3481} {RNA1310_25989} {RNA815_11713}

Mlig455_068133 {REF} {Length: 2126} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=194.7]} {Human: ENSG00000241935, HOGA1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=275, Expect=3e-91]} {Mouse: ENSMUSG00000025176, Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=258, Expect=8e-85]} {RNA1509_3481} {RNA1310_25989} {RNA815_11713}

Mlig455_068149 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=194.7]} {Human: ENSG00000241935, HOGA1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=275, Expect=3e-91]} {Mouse: ENSMUSG00000025176, Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=258, Expect=8e-85]} {RNA1509_22645, RNA1509_3481} {RNA1310_25989, RNA1509_22645, RNA1509_3481} {RNA1509_22645, RNA1509_3481, RNA815_11713}

Cumulative graph for MligTC455_43842

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.303 5.932 0.66179 1.00000
RegionR2 -0.043 5.932 0.90921 1.00000
RegionR3 0.501 5.932 0.08459 0.51487
RegionR4 0.07 5.932 0.84252 1.00000
RegionR5 0.568 5.932 0.03910 0.15694
RegionR6 0.189 5.932 0.53447 1.00000
RegionR7 -0.699 5.932 0.06915 0.50565
RegionR8 -0.283 5.932 0.52010 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.615 5.932 0.48849 1.00000
RegenerationR2 0.593 5.932 0.08888 0.47745
RegenerationR3 -0.009 5.932 0.97965 1.00000
RegenerationR4 0.577 5.932 0.13103 0.54711
RegenerationR5 0.327 5.932 0.35824 0.77004
RegenerationR6 0.526 5.932 0.15190 0.47751
RegenerationBL 0.841 5.932 0.02124 0.15818
RegenerationTP 0.533 5.932 0.20522 0.64715


Genes with expression patterns similar to MligTC455_43842

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43842 2687 55.98 Mlig455_023470, Mlig455_068133, Mlig455_068149

Neo: -

Age: -

 HOGA1 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_023470 {REF} {Length: 2193} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=194.7]} {Human: ENSG00000241935, HOGA1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=275, Expect=3e-91]} {Mouse: ENSMUSG00000025176, Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=258, Expect=8e-85]} {RNA1509_3481} {RNA1310_25989} {RNA815_11713}

Mlig455_068133 {REF} {Length: 2126} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=194.7]} {Human: ENSG00000241935, HOGA1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=275, Expect=3e-91]} {Mouse: ENSMUSG00000025176, Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=258, Expect=8e-85]} {RNA1509_3481} {RNA1310_25989} {RNA815_11713}

Mlig455_068149 {REF} {Length: 2163} {TRANSSPLICED} {Pfam: Dihydrodipicolinate synthetase family [PF00701.24, score=194.7]} {Human: ENSG00000241935, HOGA1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=275, Expect=3e-91]} {Mouse: ENSMUSG00000025176, Hoga1, 4-hydroxy-2-oxoglutarate aldolase 1, [RH, Score=258, Expect=8e-85]} {RNA1509_22645, RNA1509_3481} {RNA1310_25989, RNA1509_22645, RNA1509_3481} {RNA1509_22645, RNA1509_3481, RNA815_11713}
2. MligTC455_48550 2150 44.79 Mlig455_025093, Mlig455_025098

Neo: -

Age: -

 TLK2 1.817 0.858 - - 0.959 - -

Mlig455_025093 {REF} {Length: 5109} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=174.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.4]} {Human: ENSG00000146872, TLK2, tousled like kinase 2, [RH, Score=511, Expect=9e-170]} {Mouse: ENSMUSG00000020694, Tlk2, tousled-like kinase 2 (Arabidopsis), [RH, Score=511, Expect=6e-170]} {Dmel: FBgn0283657, Tlk, Tousled-like kinase, [Score=442, Expect=3e-138]} {Celegans: WBGene00006579, tlk-1, Serine/threonine-protein kinase tousled-like 1, [Score=440, Expect=5e-141]} {Smed: dd_Smed_v6_6431_0_1, dd_Smed_v6_6431_0_1, [Score=515, Expect=6e-174]} {RNA1509_8060} {RNA1310_6226} {RNA815_3540}

Mlig455_025098 {REF} {Length: 5172} {Pfam: Protein kinase domain [PF00069.27, score=195.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]} {Human: ENSG00000146872, TLK2, tousled like kinase 2, [RH, Score=536, Expect=2e-178]; ENSG00000198586, TLK1, tousled like kinase 1, [RH, Score=517, Expect=6e-171]} {Mouse: ENSMUSG00000020694, Tlk2, tousled-like kinase 2 (Arabidopsis), [RH, Score=535, Expect=2e-178]; ENSMUSG00000041997, Tlk1, tousled-like kinase 1, [RH, Score=518, Expect=9e-172]} {Dmel: FBgn0283657, Tlk, Tousled-like kinase, [RH, Score=474, Expect=1e-147]} {Celegans: WBGene00006579, tlk-1, Serine/threonine-protein kinase tousled-like 1, [RH, Score=476, Expect=2e-153]} {Smed: dd_Smed_v6_6431_0_1, dd_Smed_v6_6431_0_1, [RH, Score=575, Expect=0.0]} {RNA1509_29351, RNA1509_8060} {RNA1310_6226, RNA1509_29351, RNA1509_8060} {RNA1509_29351, RNA1509_8060, RNA815_3540}
3. MligTC455_39432 1139 23.73 Mlig455_050877

Neo: Neoblast

Age: -

Region-enriched R5: 1.016/0.02721

 EXOSC8 1.73 - - 0.778 0.952 - - Mlig455_050877 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: 3' exoribonuclease family, domain 1 [PF01138.23, score=66.7]} {Human: ENSG00000120699, EXOSC8, exosome component 8, [RH, Score=102, Expect=6e-25]} {Mouse: ENSMUSG00000027752, Exosc8, exosome component 8, [RH, Score=97.4, Expect=4e-23]} {RNA1509_38958} {RNA1310_20971} {RNA815_18350}
4. MligTC455_26905 1130 23.54 Mlig455_032166, Mlig455_067634

Neo: Irradiation

Age: -

Region-enriched R5: 2.210/0.00000

 1.703 - - - 0.956 - 0.747

Mlig455_032166 {REF} {Length: 3683} {TRANSSPLICED} {Smed: dd_Smed_v6_9588_0_1, dd_Smed_v6_9588_0_1, [Score=60.8, Expect=2e-09]} {RNA1509_21206} {RNA1310_6114} {RNA815_30010}

Mlig455_067634 {REF} {Length: 3725} {TRANSSPLICED} {Smed: dd_Smed_v6_9588_0_1, dd_Smed_v6_9588_0_1, [Score=60.1, Expect=4e-09]} {RNA1509_21206} {RNA1310_6114} {RNA815_30010}
5. MligTC455_39977 1171 24.41 Mlig455_070671

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.147/0.02632

 ATP13A3 1.697 0.747 - - 0.950 - - Mlig455_070671 {REF} {Length: 3324} {Pfam: haloacid dehalogenase-like hydrolase [PF00702.28, score=43.8]; Cation transport ATPase (P-type) [PF13246.8, score=25.0]} {Human: ENSG00000133657, ATP13A3, ATPase 13A3, [Score=467, Expect=4e-151]} {Mouse: ENSMUSG00000022533, Atp13a3, ATPase type 13A3, [Score=462, Expect=7e-149]} {Dmel: FBgn0052000, CG32000, [Score=426, Expect=1e-134]} {Celegans: WBGene00022010, catp-7, Cation-transporting ATPase, [Score=402, Expect=1e-132]} {Smed: dd_Smed_v6_1640_0_1, dd_Smed_v6_1640_0_1, [Score=584, Expect=0.0]} {RNA1509_24883, RNA1509_8109} {RNA1310_7327, RNA1509_24883} {RNA1509_24883, RNA815_621}
6. MligTC455_43778 880 18.33 Mlig455_041613

Neo: -

Age: -

Region-enriched R4: 1.061/0.03397

 WDR45 1.687 - - - 0.964 - 0.723 Mlig455_041613 {REF} {Length: 2756} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=214, Expect=8e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=216, Expect=5e-67]} {Dmel: FBgn0037648, CG11975, [Score=163, Expect=8e-47]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583, RNA1509_29232} {RNA1310_6509.1, RNA1509_10583, RNA1509_29232} {RNA1509_10583, RNA1509_29232, RNA815_2908}
7. MligTC455_43779 878 18.3 Mlig455_041635

Neo: -

Age: Up-Down-Up

Region-enriched R4: 1.074/0.03063

 WDR45 1.684 - - - 0.964 - 0.720 Mlig455_041635 {REF} {Length: 2705} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.0]} {Human: ENSG00000196998, WDR45, WD repeat domain 45, [RH, Score=216, Expect=1e-66]} {Mouse: ENSMUSG00000039382, Wdr45, WD repeat domain 45, [Score=219, Expect=7e-68]} {Dmel: FBgn0037648, CG11975, [Score=162, Expect=1e-46]} {Celegans: WBGene00012641, epg-6, Ectopic P Granules, [Score=92.8, Expect=1e-20]} {Smed: dd_Smed_v6_4178_0_1, dd_Smed_v6_4178_0_1, [Score=144, Expect=2e-39]} {RNA1509_10583} {RNA1310_6509.1} {RNA815_2908}
8. MligTC455_20753 657 13.69 Mlig455_062670

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R5: 1.500/0.00906

 ZC3H3 1.665 - - 0.713 0.952 - - Mlig455_062670 {REF} {Length: 4965} {TRANSSPLICED} {Pfam: WWE domain [PF02825.22, score=21.2]} {Human: ENSG00000014164, ZC3H3, zinc finger CCCH-type containing 3, [Score=52.0, Expect=6e-06]} {RNA1509_28005} {RNA1310_18286, RNA1509_28005} {RNA1509_28005, RNA815_8747}
9. MligTC455_29086 937 19.52 Mlig455_050487

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R4: 1.822/0.00015
Region-enriched R5: 1.143/0.00402

 POLR2J 0.977 - - - 0.977 - - Mlig455_050487 {REF} {Length: 612} {TRANSSPLICED} {Pfam: RNA polymerase Rpb3/Rpb11 dimerisation domain [PF13656.8, score=89.2]; RNA polymerase Rpb3/Rpb11 dimerisation domain [PF01193.26, score=34.5]} {Human: ENSG00000005075, POLR2J, RNA polymerase II subunit J, [RH, Score=160, Expect=4e-52]; ENSG00000168255, POLR2J3, RNA polymerase II subunit J3, [RH, Score=154, Expect=9e-50]; ENSG00000285437, POLR2J3, RNA polymerase II subunit J3, [RH, Score=154, Expect=9e-50]; ENSG00000228049, POLR2J2, RNA polymerase II subunit J2, [RH, Score=152, Expect=7e-49]; ENSG00000267645, AC105052.3, novel protein, POLR2J2-UPK3BL readthrough, [RH, Score=152, Expect=7e-49]} {Mouse: ENSMUSG00000039771, Polr2j, polymerase (RNA) II (DNA directed) polypeptide J, [RH, Score=160, Expect=3e-52]} {Dmel: FBgn0032634, Rpb11, [RH, Score=147, Expect=3e-47]} {Celegans: WBGene00012187, rpb-11, Probable DNA-directed RNA polymerase II subunit RPB11, [RH, Score=127, Expect=3e-39]} {Smed: dd_Smed_v6_4232_0_1, dd_Smed_v6_4232_0_1, [RH, Score=129, Expect=2e-40]} {RNA1509_11952} {RNA1310_52973, RNA1509_11952} {RNA1509_11952, RNA815_30007}
10. MligTC455_29056 214 4.46 Mlig455_005934

Neo: Int S/G2/M

Age: Up-Up-Down

 0.967 - - - 0.967 - - Mlig455_005934 {REF} {Length: 3571} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=54.7, Expect=7e-07]} {RNA1509_15781} {RNA1310_3922, RNA1509_15781} {RNA1509_15781, RNA815_5825}
11. MligTC455_21977 1104 23 Mlig455_062476

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.228

 AGL 0.96 - - - 0.960 - - Mlig455_062476 {REF} {Length: 5046} {TRANSSPLICED} {Pfam: Amylo-alpha-1,6-glucosidase [PF06202.16, score=362.7]; Glycogen debranching enzyme, glucanotransferase domain [PF14701.8, score=220.8]; Central domain of human glycogen debranching enzyme [PF14702.8, score=195.4]} {Human: ENSG00000162688, AGL, amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase, [Score=961, Expect=0.0]} {Mouse: ENSMUSG00000033400, Agl, amylo-1,6-glucosidase, 4-alpha-glucanotransferase, [Score=955, Expect=0.0]} {Dmel: FBgn0034618, CG9485, [Score=925, Expect=0.0]} {Celegans: WBGene00011050, agl-1, AGL (Amylo-1,6-GLucosidase, 4-alpha-glucanotransferase) glycogen debranching enzyme, [Score=870, Expect=0.0]} {Smed: dd_Smed_v6_4975_0_1, dd_Smed_v6_4975_0_1, [Score=978, Expect=0.0]} {RNA1509_2925} {RNA1310_1141.1, RNA1509_2925} {RNA1509_2925, RNA815_1246}
12. MligTC455_33379 73 1.53 Mlig455_048175

Neo: -

Age: -

 PDSS1 0.959 - - - - 0.959 - Mlig455_048175 {REF} {Length: 1712} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=196.4]} {Human: ENSG00000148459, PDSS1, decaprenyl diphosphate synthase subunit 1, [RH, Score=229, Expect=4e-71]} {Mouse: ENSMUSG00000026784, Pdss1, prenyl (solanesyl) diphosphate synthase, subunit 1, [RH, Score=226, Expect=3e-70]} {Dmel: FBgn0051005, qless, [RH, Score=235, Expect=9e-74]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [RH, Score=211, Expect=3e-65]} {Smed: dd_Smed_v6_12221_0_1, dd_Smed_v6_12221_0_1, [RH, Score=252, Expect=3e-81]} {RNA1509_18613} {RNA1310_15422} {RNA815_6758.1}
13. MligTC455_06593 2638 54.96 Mlig455_015772, Mlig455_049498

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.475

Region-enriched R2: 1.057/0.03873

Regeneration-upregulated R6: 1.343

Regeneration-enriched R6: 1.343

 WDR53 0.952 - - - 0.952 - -

Mlig455_015772 {REF} {Length: 2502} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.0]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [RH, Score=138, Expect=2e-37]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [RH, Score=129, Expect=3e-34]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=55.1, Expect=3e-08]} {Celegans: WBGene00270321, Y41C4A.32, [Score=49.7, Expect=9e-07]} {Smed: dd_Smed_v6_4118_0_1, dd_Smed_v6_4118_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_3753} {RNA1310_18719} {RNA815_4300}

Mlig455_049498 {REF} {Length: 2502} {Pfam: WD domain, G-beta repeat [PF00400.34, score=60.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.0]} {Human: ENSG00000185798, WDR53, WD repeat domain 53, [RH, Score=138, Expect=2e-37]} {Mouse: ENSMUSG00000022787, Wdr53, WD repeat domain 53, [RH, Score=129, Expect=3e-34]} {Dmel: FBgn0036354, Poc1, Proteome of centrioles 1, [Score=55.1, Expect=3e-08]} {Celegans: WBGene00270321, Y41C4A.32, [Score=49.7, Expect=9e-07]} {Smed: dd_Smed_v6_4118_0_1, dd_Smed_v6_4118_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_18081, RNA1509_25733, RNA1509_26103, RNA1509_27935, RNA1509_3753, RNA1509_59855} {RNA1310_18719, RNA1509_18081, RNA1509_25733, RNA1509_26103, RNA1509_27935, RNA1509_3753, RNA1509_59855} {RNA1509_18081, RNA1509_25733, RNA1509_26103, RNA1509_27935, RNA1509_3753, RNA1509_59855, RNA815_4300}
14. MligTC455_22079 400 8.33 Mlig455_031528

Neo: -

Age: -

 ROCK2 0.952 - - - 0.952 - - Mlig455_031528 {REF} {Length: 5932} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=167.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=85.0]; Kinase-like [PF14531.8, score=43.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=28.0]; PH domain [PF00169.31, score=21.1]; Rho Binding [PF08912.13, score=21.0]; ABC1 atypical kinase-like domain [PF03109.18, score=19.7]} {Human: ENSG00000134318, ROCK2, Rho associated coiled-coil containing protein kinase 2, [RH, Score=486, Expect=6e-150]} {Mouse: ENSMUSG00000020580, Rock2, Rho-associated coiled-coil containing protein kinase 2, [RH, Score=491, Expect=2e-151]} {Dmel: FBgn0026181, Rok, Rho kinase, [Score=304, Expect=2e-85]} {Celegans: WBGene00002694, let-502, Rho-associated protein kinase let-502, [Score=343, Expect=8e-100]} {Smed: dd_Smed_v6_2914_0_1, dd_Smed_v6_2914_0_1, [RH, Score=327, Expect=4e-94]} {RNA1509_27338, RNA1509_6249} {RNA1310_2176.1, RNA1509_27338} {RNA1509_27338, RNA815_633}
15. MligTC455_24338 310 6.45 Mlig455_019705

Neo: -

Age: -

Region-enriched R5: 1.816/0.01663

 ICMT 0.952 - - - 0.952 - - Mlig455_019705 {REF} {Length: 2658} {Pfam: Carbonic anhydrase [PF00484.21, score=104.4]; Isoprenylcysteine carboxyl methyltransferase (ICMT) family [PF04140.16, score=93.2]; Phospholipid methyltransferase [PF04191.15, score=36.7]} {Human: ENSG00000116237, ICMT, isoprenylcysteine carboxyl methyltransferase, [Score=187, Expect=8e-54]} {Mouse: ENSMUSG00000039662, Icmt, isoprenylcysteine carboxyl methyltransferase, [Score=187, Expect=3e-54]} {Dmel: FBgn0037646, CAHbeta, Carbonic anhydrase beta, [RH, Score=198, Expect=8e-59]} {Celegans: WBGene00013805, bca-2, Carbonic anhydrase, [RH, Score=187, Expect=8e-55]} {Smed: dd_Smed_v6_4744_0_1, dd_Smed_v6_4744_0_1, [Score=162, Expect=3e-45]} {RNA1509_32746, RNA1509_58883, RNA1509_8590} {RNA1310_13755.1, RNA1509_32746, RNA1509_58883, RNA1509_8590} {RNA1509_32746, RNA1509_58883, RNA1509_8590, RNA815_16897}
16. MligTC455_39007 2184 45.51 Mlig455_062119, Mlig455_069663

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.418/0.00014

Regeneration-upregulated BL: 1.963

Regeneration-enriched BL: 1.963

 NUP210, NUP210L 0.952 - - - 0.952 - -

Mlig455_062119 {REF} {Length: 7147} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=26.5]} {Human: ENSG00000132182, NUP210, nucleoporin 210, [RH, Score=536, Expect=2e-159]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=2e-149]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [RH, Score=243, Expect=2e-64]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [Score=248, Expect=5e-66]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [RH, Score=549, Expect=1e-163]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899}

Mlig455_069663 {REF} {Length: 6507} {Pfam: Bacterial Ig-like domain (group 2) [PF02368.20, score=22.5]} {Human: ENSG00000143552, NUP210L, nucleoporin 210 like, [Score=473, Expect=8e-137]} {Mouse: ENSMUSG00000027939, Nup210l, nucleoporin 210-like, [RH, Score=506, Expect=5e-148]} {Dmel: FBgn0266580, Gp210, Glycoprotein 210 kDa, [Score=224, Expect=2e-58]} {Celegans: WBGene00003798, npp-12, Nuclear Pore complex Protein, [RH, Score=226, Expect=6e-59]} {Smed: dd_Smed_v6_4698_0_1, dd_Smed_v6_4698_0_1, [Score=538, Expect=2e-158]} {RNA1509_2772} {RNA1310_410.1} {RNA815_6899}
17. MligTC455_29499 636 13.25 Mlig455_010071

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.584

 RNPS1 0.951 - - - 0.951 - - Mlig455_010071 {REF} {Length: 1824} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=49.2]; Macoilin family [PF09726.11, score=19.5]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [Score=107, Expect=8e-27]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [Score=107, Expect=8e-27]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [Score=94.4, Expect=9e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [Score=86.3, Expect=2e-19]} {Smed: dd_Smed_v6_1431_0_2, dd_Smed_v6_1431_0_2, [Score=68.9, Expect=3e-13]} {RNA1509_26121, RNA1509_57315} {RNA1310_17458, RNA1509_26121, RNA1509_57315} {RNA1509_26121, RNA1509_57315, RNA815_20454}
18. MligTC455_38216 52 1.09 Mlig455_048114

Neo: -

Age: logFC(26M/2M)=0.817

 PTGER4 0.951 - - - - 0.951 - Mlig455_048114 {REF} {Length: 6388} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=54.5]} {Human: ENSG00000171522, PTGER4, prostaglandin E receptor 4, [Score=120, Expect=6e-30]} {Mouse: ENSMUSG00000039942, Ptger4, prostaglandin E receptor 4 (subtype EP4), [Score=112, Expect=5e-27]} {RNA1509_54683} {RNA1310_22137} {RNA815_39088}
19. MligTC455_49060 1565 32.6 Mlig455_060881

Neo: Int S/G2/M

Age: -

 UBR7 0.95 - - - 0.950 - - Mlig455_060881 {REF} {Length: 2374} {TRANSSPLICED} {Pfam: Putative zinc finger in N-recognin (UBR box) [PF02207.22, score=52.3]} {Human: ENSG00000278787, UBR7, ubiquitin protein ligase E3 component n-recognin 7 (putative), [RH, Score=175, Expect=8e-49]; ENSG00000012963, UBR7, ubiquitin protein ligase E3 component n-recognin 7 (putative), [RH, Score=175, Expect=8e-49]} {Mouse: ENSMUSG00000041712, Ubr7, ubiquitin protein ligase E3 component n-recognin 7 (putative), [RH, Score=168, Expect=2e-46]} {Dmel: FBgn0032635, CG15141, [RH, Score=142, Expect=2e-37]} {Celegans: WBGene00011912, T22C1.1, [Score=137, Expect=6e-36]} {Smed: dd_Smed_v6_4379_0_1, dd_Smed_v6_4379_0_1, [Score=144, Expect=1e-38]} {RNA1509_13042, RNA1509_23496, RNA1509_23929} {RNA1310_10446, RNA1509_23496, RNA1509_23929} {RNA1509_23496, RNA1509_23929, RNA815_17984}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA