Data search
Results for MligTC455_43845
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43845 | 1129 | 23.53 | Mlig455_054775 | Neo: Int S/G2/M |
PSMC4 | Mlig455_054775 {REF} {Length: 1735} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.2]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=46.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=33.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=32.1]; AAA ATPase domain [PF13191.8, score=23.3]; AAA domain [PF13401.8, score=23.0]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.3]; IstB-like ATP binding protein [PF01695.19, score=19.7]; AAA domain [PF13521.8, score=19.6]; Protein of unknown function (DUF815) [PF05673.15, score=19.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.3]; P-loop containing dynein motor region [PF12775.9, score=18.1]} {Human: ENSG00000281221, PSMC4, proteasome 26S subunit, ATPase 4, [Score=580, Expect=0.0]; ENSG00000013275, PSMC4, proteasome 26S subunit, ATPase 4, [Score=580, Expect=0.0]} {Mouse: ENSMUSG00000030603, Psmc4, proteasome (prosome, macropain) 26S subunit, ATPase, 4, [Score=579, Expect=0.0]} {Dmel: FBgn0028686, Rpt3, Regulatory particle triple-A ATPase 3, [Score=560, Expect=0.0]} {Celegans: WBGene00004503, rpt-3, Probable 26S protease regulatory subunit 6B, [Score=497, Expect=2e-176]} {Smed: dd_Smed_v6_1279_0_1, dd_Smed_v6_1279_0_1, [Score=552, Expect=0.0]} {RNA1509_2743} {RNA1310_15862} {RNA815_6256.1} |
Cumulative graph for MligTC455_43845
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.161 | 4.793 | 0.04687 | 0.51654 | |
| RegionR2 | -1.157 | 4.793 | 0.16097 | 0.50204 | |
| RegionR3 | -0.778 | 4.793 | 0.25920 | 0.80283 | |
| RegionR4 | 0.61 | 4.793 | 0.39730 | 0.72381 | |
| RegionR5 | 0.073 | 4.793 | 0.90346 | 1.00000 | |
| RegionR6 | -0.297 | 4.793 | 0.65421 | 1.00000 | |
| RegionR7 | -0.871 | 4.793 | 0.28900 | 0.92252 | |
| RegionR8 | 0.258 | 4.793 | 0.77354 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.565 | 4.793 | 0.29984 | 0.99664 | |
| RegenerationR2 | 0.692 | 4.793 | 0.37187 | 0.79707 | |
| RegenerationR3 | 0.815 | 4.793 | 0.32360 | 0.75149 | |
| RegenerationR4 | 0.18 | 4.793 | 0.82457 | 0.99545 | |
| RegenerationR5 | 0.619 | 4.793 | 0.42752 | 0.81645 | |
| RegenerationR6 | 1.239 | 4.793 | 0.12375 | 0.43239 | |
| RegenerationBL | 1.303 | 4.793 | 0.08435 | 0.34019 | |
| RegenerationTP | 0.71 | 4.793 | 0.41654 | 0.84154 |
Genes with expression patterns similar to MligTC455_43845
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43845 | 1129 | 23.53 | Mlig455_054775 | Neo: Int S/G2/M |
PSMC4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_054775 {REF} {Length: 1735} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=147.2]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=46.8]; AAA domain (Cdc48 subfamily) [PF07724.16, score=33.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=32.1]; AAA ATPase domain [PF13191.8, score=23.3]; AAA domain [PF13401.8, score=23.0]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=21.3]; IstB-like ATP binding protein [PF01695.19, score=19.7]; AAA domain [PF13521.8, score=19.6]; Protein of unknown function (DUF815) [PF05673.15, score=19.5]; Magnesium chelatase, subunit ChlI [PF01078.23, score=19.3]; P-loop containing dynein motor region [PF12775.9, score=18.1]} {Human: ENSG00000281221, PSMC4, proteasome 26S subunit, ATPase 4, [Score=580, Expect=0.0]; ENSG00000013275, PSMC4, proteasome 26S subunit, ATPase 4, [Score=580, Expect=0.0]} {Mouse: ENSMUSG00000030603, Psmc4, proteasome (prosome, macropain) 26S subunit, ATPase, 4, [Score=579, Expect=0.0]} {Dmel: FBgn0028686, Rpt3, Regulatory particle triple-A ATPase 3, [Score=560, Expect=0.0]} {Celegans: WBGene00004503, rpt-3, Probable 26S protease regulatory subunit 6B, [Score=497, Expect=2e-176]} {Smed: dd_Smed_v6_1279_0_1, dd_Smed_v6_1279_0_1, [Score=552, Expect=0.0]} {RNA1509_2743} {RNA1310_15862} {RNA815_6256.1} |
| 2. | MligTC455_42084 | 1828 | 38.07 | Mlig455_001444 | Neo: Int S/G2/M Age: - |
ETF1 | 1.67 | - | - | - | 0.952 | 0.718 | - | Mlig455_001444 {REF} {Length: 3397} {TRANSSPLICED} {Pfam: eRF1 domain 2 [PF03464.17, score=158.3]; eRF1 domain 3 [PF03465.17, score=129.0]; eRF1 domain 1 [PF03463.17, score=51.5]; Bacterial archaeo-eukaryotic release factor family 10 [PF18854.3, score=34.5]; Actinobacteria/chloroflexi VLRF1 release factor [PF18859.3, score=32.8]} {Human: ENSG00000120705, ETF1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Mouse: ENSMUSG00000024360, Etf1, eukaryotic translation termination factor 1, [RH, Score=736, Expect=0.0]} {Dmel: FBgn0036974, eRF1, eukaryotic translation release factor 1, [RH, Score=746, Expect=0.0]} {Celegans: WBGene00020269, erfa-1, Eukaryotic peptide chain release factor subunit 1, [RH, Score=680, Expect=0.0]} {Smed: dd_Smed_v6_5017_0_1, dd_Smed_v6_5017_0_1, [RH, Score=673, Expect=0.0]} {RNA1509_1928, RNA1509_30112} {RNA1310_2584.2, RNA1509_1928, RNA1509_30112} {RNA1509_1928, RNA1509_30112, RNA815_1129.1} |
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