Data search
Results for MligTC455_43849
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_43849 | 1317 | 27.44 | Mlig455_035509 | Neo: - Age: Up-Up-Down |
FADS6 | Mlig455_035509 {REF} {Length: 1853} {Pfam: Fatty acid desaturase [PF00487.26, score=54.2]} {Human: ENSG00000172782, FADS6, fatty acid desaturase 6, [RH, Score=268, Expect=1e-87]} {Mouse: ENSMUSG00000044788, Fads6, fatty acid desaturase domain family, member 6, [RH, Score=258, Expect=5e-84]} {Celegans: WBGene00001396, fat-4, Delta(5) fatty acid desaturase fat-4, [Score=47.0, Expect=1e-05]} {RNA1509_11647, RNA1509_18524, RNA1509_24627, RNA1509_47455, RNA1509_8313} {RNA1310_20247.1, RNA1509_11647, RNA1509_18524, RNA1509_24627, RNA1509_47455, RNA1509_8313} {RNA1509_11647, RNA1509_18524, RNA1509_24627, RNA1509_47455, RNA1509_8313, RNA815_7994.1} |
Cumulative graph for MligTC455_43849
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.881 | 5.117 | 0.35134 | 0.99458 | |
| RegionR2 | -0.635 | 5.117 | 0.25265 | 0.63207 | |
| RegionR3 | 1.059 | 5.117 | 0.00780 | 0.12927 | |
| RegionR4 | 0.652 | 5.117 | 0.16617 | 0.42757 | |
| RegionR5 | 0.49 | 5.117 | 0.19716 | 0.48550 | |
| RegionR6 | 0.17 | 5.117 | 0.69517 | 1.00000 | |
| RegionR7 | -0.783 | 5.117 | 0.15390 | 0.72619 | |
| RegionR8 | -0.072 | 5.117 | 0.91199 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.423 | 5.117 | 0.73022 | 1.00000 | |
| RegenerationR2 | 0.283 | 5.117 | 0.57349 | 0.90366 | |
| RegenerationR3 | -0.544 | 5.117 | 0.27483 | 0.70902 | |
| RegenerationR4 | -0.164 | 5.117 | 0.75403 | 0.97063 | |
| RegenerationR5 | -0.277 | 5.117 | 0.56228 | 0.89272 | |
| RegenerationR6 | -0.05 | 5.117 | 0.92072 | 1.00000 | |
| RegenerationBL | -0.956 | 5.117 | 0.11332 | 0.39759 | |
| RegenerationTP | -0.945 | 5.117 | 0.16824 | 0.60068 |
Genes with expression patterns similar to MligTC455_43849
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_43849 | 1317 | 27.44 | Mlig455_035509 | Neo: - Age: Up-Up-Down |
FADS6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_035509 {REF} {Length: 1853} {Pfam: Fatty acid desaturase [PF00487.26, score=54.2]} {Human: ENSG00000172782, FADS6, fatty acid desaturase 6, [RH, Score=268, Expect=1e-87]} {Mouse: ENSMUSG00000044788, Fads6, fatty acid desaturase domain family, member 6, [RH, Score=258, Expect=5e-84]} {Celegans: WBGene00001396, fat-4, Delta(5) fatty acid desaturase fat-4, [Score=47.0, Expect=1e-05]} {RNA1509_11647, RNA1509_18524, RNA1509_24627, RNA1509_47455, RNA1509_8313} {RNA1310_20247.1, RNA1509_11647, RNA1509_18524, RNA1509_24627, RNA1509_47455, RNA1509_8313} {RNA1509_11647, RNA1509_18524, RNA1509_24627, RNA1509_47455, RNA1509_8313, RNA815_7994.1} |
| 2. | MligTC455_36060 | 69 | 1.45 | Mlig455_056811 | Neo: - Age: Up-Down-Down |
0.959 | - | - | - | - | - | 0.959 | Mlig455_056811 {REF} {Length: 2647} {Pfam: HEPN domain [PF05168.16, score=26.2]} {RNA1509_29577} {RNA1310_37309.1} {RNA815_5901.1} | |
| 3. | MligTC455_46380 | 1069 | 22.27 | Mlig455_045095 | Neo: - Age: - |
ARL5B | 0.953 | - | - | - | - | 0.953 | - | Mlig455_045095 {REF} {Length: 2086} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=214.1]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=49.6]; Ras family [PF00071.24, score=42.1]; Signal recognition particle receptor beta subunit [PF09439.12, score=40.6]; G-protein alpha subunit [PF00503.22, score=35.1]; 50S ribosome-binding GTPase [PF01926.25, score=32.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=27.6]} {Human: ENSG00000165997, ARL5B, ADP ribosylation factor like GTPase 5B, [RH, Score=253, Expect=8e-87]} {Mouse: ENSMUSG00000017418, Arl5b, ADP-ribosylation factor-like 5B, [RH, Score=254, Expect=4e-87]} {Dmel: FBgn0035866, Arl5, ADP-ribosylation factor-like 5, [RH, Score=257, Expect=2e-88]} {Celegans: WBGene00000189, arl-5, ADP-ribosylation factor-like protein 5, [RH, Score=192, Expect=5e-63]} {Smed: dd_Smed_v6_4015_0_1, dd_Smed_v6_4015_0_1, [RH, Score=245, Expect=5e-84]} {RNA1509_10283, RNA1509_22743, RNA1509_54050, RNA1509_9733} {RNA1310_17766.2, RNA1509_22743, RNA1509_54050, RNA1509_9733} {RNA1509_22743, RNA1509_54050, RNA1509_9733, RNA815_21549} |
Berezikov Lab - 2020-2021 © ERIBA