TomoSeq data search

Data search

Results for MligTC455_43960

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_43960	1900	39.58	Mlig455_037734	Neo: - Age: -		Mlig455_037734 {REF} {Length: 2577} {TRANSSPLICED} {RNA1509_29491, RNA1509_31142, RNA1509_36154, RNA1509_47660} {RNA1310_18105.1, RNA1509_29491, RNA1509_31142, RNA1509_36154} {RNA1509_29491, RNA1509_31142, RNA1509_36154, RNA815_20489}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_43960

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.582	5.537	0.00189	0.13956
RegionR2	0.246	5.537	0.40550	0.79946
RegionR3	0.705	5.537	0.00247	0.05807
RegionR4	0.534	5.537	0.05242	0.19912
RegionR5	0.849	5.537	0.00009	0.00148
RegionR6	0.604	5.537	0.01288	0.19683
RegionR7	0.213	5.537	0.48336	1.00000
RegionR8	-0.568	5.537	0.15700	0.71838

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	1.576	5.537	0.18252	0.92312
RegenerationR2	0.192	5.537	0.40061	0.81465
RegenerationR3	0.024	5.537	0.92347	1.00000
RegenerationR4	-0.026	5.537	0.91996	1.00000
RegenerationR5	-0.107	5.537	0.64160	0.92756
RegenerationR6	-0.195	5.537	0.45239	0.77239
RegenerationBL	-0.489	5.537	0.14899	0.46125
RegenerationTP	0.788	5.537	0.01347	0.19826

Genes with expression patterns similar to MligTC455_43960

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_43960	1900	39.58	Mlig455_037734	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_037734 {REF} {Length: 2577} {TRANSSPLICED} {RNA1509_29491, RNA1509_31142, RNA1509_36154, RNA1509_47660} {RNA1310_18105.1, RNA1509_29491, RNA1509_31142, RNA1509_36154} {RNA1509_29491, RNA1509_31142, RNA1509_36154, RNA815_20489}
2.	MligTC455_31832	387	8.06	Mlig455_016110	Neo: - Age: Down-Up-Down	RNF11	0.965	-	-	-	0.965	-	-	Mlig455_016110 {REF} {Length: 6352} {Pfam: Ring finger domain [PF13639.8, score=46.9]; RING-like zinc finger [PF17123.7, score=41.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=31.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.6]; RING-type zinc-finger [PF13445.8, score=30.2]; RING-H2 zinc finger domain [PF12678.9, score=28.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.4]; zinc-RING finger domain [PF14634.8, score=26.9]; Prokaryotic RING finger family 4 [PF14447.8, score=21.8]; Zinc-ribbon, C4HC2 type [PF17120.7, score=21.6]} {Human: ENSG00000123091, RNF11, ring finger protein 11, [Score=92.4, Expect=6e-25]} {Mouse: ENSMUSG00000028557, Rnf11, ring finger protein 11, [Score=92.4, Expect=4e-25]} {Dmel: FBgn0052850, CG32850, [Score=81.3, Expect=5e-21]} {Celegans: WBGene00007226, C01G6.4, [Score=84.7, Expect=4e-22]} {Smed: dd_Smed_v6_6913_0_1, dd_Smed_v6_6913_0_1, [Score=87.4, Expect=1e-22]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_43960

1900

39.58

Mlig455_037734

Neo: -

Age: -

1.000

MligTC455_31832

387

8.06

Mlig455_016110

Neo: -

Age: Down-Up-Down

RNF11

0.965

Mlig455_016110 {REF} {Length: 6352} {Pfam: Ring finger domain [PF13639.8, score=46.9]; RING-like zinc finger [PF17123.7, score=41.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=31.9]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=31.6]; RING-type zinc-finger [PF13445.8, score=30.2]; RING-H2 zinc finger domain [PF12678.9, score=28.4]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=27.4]; zinc-RING finger domain [PF14634.8, score=26.9]; Prokaryotic RING finger family 4 [PF14447.8, score=21.8]; Zinc-ribbon, C4HC2 type [PF17120.7, score=21.6]} {Human: ENSG00000123091, RNF11, ring finger protein 11, [Score=92.4, Expect=6e-25]} {Mouse: ENSMUSG00000028557, Rnf11, ring finger protein 11, [Score=92.4, Expect=4e-25]} {Dmel: FBgn0052850, CG32850, [Score=81.3, Expect=5e-21]} {Celegans: WBGene00007226, C01G6.4, [Score=84.7, Expect=4e-22]} {Smed: dd_Smed_v6_6913_0_1, dd_Smed_v6_6913_0_1, [Score=87.4, Expect=1e-22]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502}