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Results for MligTC455_44005

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44005 3913 81.53 Mlig455_052030, Mlig455_057256

Neo: -

Age: -

UBE2A

Mlig455_052030 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=182.9]} {Human: ENSG00000077721, UBE2A, ubiquitin conjugating enzyme E2 A, [RH, Score=279, Expect=1e-97]; ENSG00000119048, UBE2B, ubiquitin conjugating enzyme E2 B, [RH, Score=276, Expect=8e-97]} {Mouse: ENSMUSG00000016308, Ube2a, ubiquitin-conjugating enzyme E2A, [RH, Score=279, Expect=7e-98]; ENSMUSG00000020390, Ube2b, ubiquitin-conjugating enzyme E2B, [RH, Score=276, Expect=5e-97]} {Dmel: FBgn0004436, Ubc6, Ubiquitin conjugating enzyme 6, [RH, Score=268, Expect=2e-93]} {Celegans: WBGene00006701, ubc-1, Ubiquitin-conjugating enzyme E2 1, [RH, Score=278, Expect=2e-97]} {Smed: dd_Smed_v6_3543_0_1, dd_Smed_v6_3543_0_1, [RH, Score=253, Expect=5e-88]} {RNA1509_12520, RNA1509_19602, RNA1509_20010, RNA1509_53899} {RNA1310_25495, RNA1509_12520, RNA1509_19602, RNA1509_20010, RNA1509_53899} {RNA1509_12520, RNA1509_19602, RNA1509_20010, RNA1509_53899, RNA815_9750.1}

Mlig455_057256 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=182.7]} {Human: ENSG00000077721, UBE2A, ubiquitin conjugating enzyme E2 A, [RH, Score=277, Expect=6e-97]; ENSG00000119048, UBE2B, ubiquitin conjugating enzyme E2 B, [RH, Score=275, Expect=5e-96]} {Mouse: ENSMUSG00000016308, Ube2a, ubiquitin-conjugating enzyme E2A, [RH, Score=277, Expect=4e-97]; ENSMUSG00000020390, Ube2b, ubiquitin-conjugating enzyme E2B, [RH, Score=275, Expect=3e-96]} {Dmel: FBgn0004436, Ubc6, Ubiquitin conjugating enzyme 6, [RH, Score=266, Expect=7e-93]} {Celegans: WBGene00006701, ubc-1, Ubiquitin-conjugating enzyme E2 1, [RH, Score=277, Expect=1e-96]} {Smed: dd_Smed_v6_3543_0_1, dd_Smed_v6_3543_0_1, [RH, Score=251, Expect=3e-87]} {RNA1509_51040, RNA1509_53899} {RNA1310_21555.1, RNA1509_51040} {RNA1509_51040, RNA815_9750.1}

Cumulative graph for MligTC455_44005

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.315 6.493 0.59871 1.00000
RegionR2 0.076 6.493 0.84369 1.00000
RegionR3 -0.166 6.493 0.61275 1.00000
RegionR4 0.114 6.493 0.75663 1.00000
RegionR5 -0.112 6.493 0.72239 1.00000
RegionR6 -0.25 6.493 0.45150 1.00000
RegionR7 0.299 6.493 0.36984 1.00000
RegionR8 0.354 6.493 0.35839 0.99255

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.06 6.493 0.24618 0.96633
RegenerationR2 0.028 6.493 0.94288 1.00000
RegenerationR3 0.123 6.493 0.76225 0.96806
RegenerationR4 -0.055 6.493 0.89575 1.00000
RegenerationR5 0.281 6.493 0.48166 0.84717
RegenerationR6 0.55 6.493 0.17452 0.50701
RegenerationBL -0.093 6.493 0.80177 1.00000
RegenerationTP -0.916 6.493 0.03190 0.29960


Genes with expression patterns similar to MligTC455_44005

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44005 3913 81.53 Mlig455_052030, Mlig455_057256

Neo: -

Age: -

UBE2A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_052030 {REF} {Length: 1351} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=182.9]} {Human: ENSG00000077721, UBE2A, ubiquitin conjugating enzyme E2 A, [RH, Score=279, Expect=1e-97]; ENSG00000119048, UBE2B, ubiquitin conjugating enzyme E2 B, [RH, Score=276, Expect=8e-97]} {Mouse: ENSMUSG00000016308, Ube2a, ubiquitin-conjugating enzyme E2A, [RH, Score=279, Expect=7e-98]; ENSMUSG00000020390, Ube2b, ubiquitin-conjugating enzyme E2B, [RH, Score=276, Expect=5e-97]} {Dmel: FBgn0004436, Ubc6, Ubiquitin conjugating enzyme 6, [RH, Score=268, Expect=2e-93]} {Celegans: WBGene00006701, ubc-1, Ubiquitin-conjugating enzyme E2 1, [RH, Score=278, Expect=2e-97]} {Smed: dd_Smed_v6_3543_0_1, dd_Smed_v6_3543_0_1, [RH, Score=253, Expect=5e-88]} {RNA1509_12520, RNA1509_19602, RNA1509_20010, RNA1509_53899} {RNA1310_25495, RNA1509_12520, RNA1509_19602, RNA1509_20010, RNA1509_53899} {RNA1509_12520, RNA1509_19602, RNA1509_20010, RNA1509_53899, RNA815_9750.1}

Mlig455_057256 {REF} {Length: 1725} {TRANSSPLICED} {Pfam: Ubiquitin-conjugating enzyme [PF00179.28, score=182.7]} {Human: ENSG00000077721, UBE2A, ubiquitin conjugating enzyme E2 A, [RH, Score=277, Expect=6e-97]; ENSG00000119048, UBE2B, ubiquitin conjugating enzyme E2 B, [RH, Score=275, Expect=5e-96]} {Mouse: ENSMUSG00000016308, Ube2a, ubiquitin-conjugating enzyme E2A, [RH, Score=277, Expect=4e-97]; ENSMUSG00000020390, Ube2b, ubiquitin-conjugating enzyme E2B, [RH, Score=275, Expect=3e-96]} {Dmel: FBgn0004436, Ubc6, Ubiquitin conjugating enzyme 6, [RH, Score=266, Expect=7e-93]} {Celegans: WBGene00006701, ubc-1, Ubiquitin-conjugating enzyme E2 1, [RH, Score=277, Expect=1e-96]} {Smed: dd_Smed_v6_3543_0_1, dd_Smed_v6_3543_0_1, [RH, Score=251, Expect=3e-87]} {RNA1509_51040, RNA1509_53899} {RNA1310_21555.1, RNA1509_51040} {RNA1509_51040, RNA815_9750.1}
2. MligTC455_33902 1046 21.79 Mlig455_066613

Neo: -

Age: -

Region-enriched R4: 1.093/0.00684

XRCC1 1.71 - - - - 0.962 0.748 Mlig455_066613 {REF} {Length: 4223} {TRANSSPLICED} {Pfam: XRCC1 N terminal domain [PF01834.18, score=179.9]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=52.1]; BRCA1 C Terminus (BRCT) domain [PF00533.28, score=50.8]; twin BRCT domain [PF12738.9, score=28.9]; DNA ligase 3 BRCT domain [PF16759.7, score=24.7]} {Human: ENSG00000073050, XRCC1, X-ray repair cross complementing 1, [Score=229, Expect=1e-64]} {Mouse: ENSMUSG00000051768, Xrcc1, X-ray repair complementing defective repair in Chinese hamster cells 1, [Score=233, Expect=2e-66]} {Dmel: FBgn0026751, XRCC1, [RH, Score=133, Expect=4e-32]} {Smed: dd_Smed_v6_18657_0_1, dd_Smed_v6_18657_0_1, [RH, Score=147, Expect=5e-37]} {RNA1509_17007, RNA1509_6334} {RNA1310_5351.1, RNA1509_17007, RNA1509_6334} {RNA1509_17007, RNA1509_6334, RNA815_5311.1}
3. MligTC455_48252 632 13.16 Mlig455_033909

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_033909 {REF} {Length: 1888} {Smed: dd_Smed_v6_12735_0_1, dd_Smed_v6_12735_0_1, [Score=48.5, Expect=5e-06]} {RNA1509_17154} {RNA1310_5539.1} {RNA815_8263}
4. MligTC455_53030 4930 102.71 Mlig455_000142

Neo: -

Age: logFC(26M/2M)=-0.225

Regeneration-upregulated BL: 1.592

Regeneration-enriched BL: 1.592

0.964 - - - - 0.964 - Mlig455_000142 {REF} {Length: 4248} {Pfam: YEATS family [PF03366.18, score=38.0]; Domain of unknown function (DUF4352) [PF11611.10, score=28.2]; Family of unknown function (DUF6150) [PF19647.1, score=25.6]; RTX C-terminal domain [PF08339.12, score=23.3]; RNA helicase [PF00910.24, score=22.0]; Glutaminase [PF18626.3, score=20.4]} {Smed: dd_Smed_v6_28015_0_1, dd_Smed_v6_28015_0_1, [RH, Score=65.9, Expect=2e-11]} {RNA1509_10930, RNA1509_1564, RNA1509_15935, RNA1509_26946, RNA1509_27652, RNA1509_36474, RNA1509_3803} {RNA1310_2342, RNA1509_10930, RNA1509_1564, RNA1509_15935, RNA1509_26946, RNA1509_27652, RNA1509_36474, RNA1509_3803} {RNA1509_10930, RNA1509_1564, RNA1509_15935, RNA1509_26946, RNA1509_27652, RNA1509_36474, RNA1509_3803, RNA815_2883.1}
5. MligTC455_45829 293 6.11 Mlig455_044973

Neo: -

Age: -

CPT1B 0.959 - - - - 0.959 - Mlig455_044973 {REF} {Length: 4228} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=588.8]; Carnitine O-palmitoyltransferase N-terminus [PF16484.7, score=64.6]} {Human: ENSG00000205560, CPT1B, carnitine palmitoyltransferase 1B, [RH, Score=839, Expect=0.0]; ENSG00000110090, CPT1A, carnitine palmitoyltransferase 1A, [RH, Score=837, Expect=0.0]} {Mouse: ENSMUSG00000078937, Cpt1b, carnitine palmitoyltransferase 1b, muscle, [RH, Score=831, Expect=0.0]; ENSMUSG00000024900, Cpt1a, carnitine palmitoyltransferase 1a, liver, [RH, Score=813, Expect=0.0]} {Dmel: FBgn0261862, whd, withered, [RH, Score=803, Expect=0.0]} {Celegans: WBGene00012907, cpt-1, Carnitine Palmitoyl Transferase, [RH, Score=736, Expect=0.0]} {Smed: dd_Smed_v6_4901_0_1, dd_Smed_v6_4901_0_1, [RH, Score=819, Expect=0.0]} {RNA1509_5189} {RNA1310_3108, RNA1509_5189} {RNA1509_5189, RNA815_915.1}
6. MligTC455_53096 1330 27.71 Mlig455_068899

Neo: -

Age: Down-Up-Down

SEC14L2 0.958 - - - - 0.958 - Mlig455_068899 {REF} {Length: 1803} {Pfam: CRAL/TRIO domain [PF00650.22, score=99.2]; Golgi-dynamics membrane-trafficking [PF13897.8, score=36.4]} {Human: ENSG00000100003, SEC14L2, SEC14 like lipid binding 2, [RH, Score=278, Expect=1e-89]; ENSG00000133488, SEC14L4, SEC14 like lipid binding 4, [RH, Score=269, Expect=4e-86]; ENSG00000100012, SEC14L3, SEC14 like lipid binding 3, [RH, Score=266, Expect=6e-85]} {Mouse: ENSMUSG00000003585, Sec14l2, SEC14-like lipid binding 2, [RH, Score=277, Expect=2e-89]} {Dmel: FBgn0035146, CG13893, [RH, Score=190, Expect=5e-56]} {Celegans: WBGene00019268, H41C03.1, [RH, Score=119, Expect=1e-29]} {Smed: dd_Smed_v6_11513_1_1, dd_Smed_v6_11513_1_1, [RH, Score=282, Expect=3e-92]} {RNA1509_13482} {RNA1310_16456, RNA1509_13482} {RNA1509_13482, RNA815_6612}
7. MligTC455_35495 586 12.21 Mlig455_023069

Neo: -

Age: -

PCF11 0.952 - - - - 0.952 - Mlig455_023069 {REF} {Length: 4117} {TRANSSPLICED} {Pfam: CID domain [PF04818.15, score=32.6]} {Human: ENSG00000165494, PCF11, PCF11, cleavage and polyadenylation factor subunit, [RH, Score=91.3, Expect=6e-18]} {Mouse: ENSMUSG00000041328, Pcf11, PCF11 cleavage and polyadenylation factor subunit, [RH, Score=92.4, Expect=2e-18]} {Dmel: FBgn0264962, Pcf11, Protein 1 of cleavage and polyadenylation factor 1, [Score=78.6, Expect=3e-14]} {Smed: dd_Smed_v6_3280_0_1, dd_Smed_v6_3280_0_1, [RH, Score=191, Expect=3e-50]} {RNA1509_13594} {RNA1310_1865.1} {RNA815_5333}

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