Data search
Results for MligTC455_44018
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44018 | 92 | 1.91 | Mlig455_052409 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.446/0.02444 |
MRPL47 | Mlig455_052409 {REF} {Length: 2006} {TRANSSPLICED} {Pfam: Mitochondrial 39-S ribosomal protein L47 (MRP-L47) [PF06984.15, score=88.9]} {Human: ENSG00000136522, MRPL47, mitochondrial ribosomal protein L47, [RH, Score=89.4, Expect=3e-21]} {Mouse: ENSMUSG00000037531, Mrpl47, mitochondrial ribosomal protein L47, [RH, Score=92.4, Expect=2e-22]} {Dmel: FBgn0014023, mRpL47, mitochondrial ribosomal protein L47, [RH, Score=103, Expect=1e-26]} {Celegans: WBGene00015092, mrpl-47, Mitochondrial Ribosomal Protein, Large, [RH, Score=90.9, Expect=3e-22]} {Smed: dd_Smed_v6_1861_0_1, dd_Smed_v6_1861_0_1, [RH, Score=146, Expect=3e-44]} {RNA1509_15032} {RNA1310_28621} {RNA815_14114} |
Cumulative graph for MligTC455_44018
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.295 | 2.033 | 0.99964 | 1.00000 | |
| RegionR2 | 0.443 | 2.033 | 0.64032 | 0.97809 | |
| RegionR3 | 1.095 | 2.033 | 0.32688 | 0.86508 | |
| RegionR4 | 1.414 | 2.033 | 0.26850 | 0.57341 | |
| RegionR5 | 2.446 | 2.033 | 0.00314 | 0.02444 | |
| RegionR6 | 1.306 | 2.033 | 0.24899 | 0.83500 | |
| RegionR7 | 0.598 | 2.033 | 0.61639 | 1.00000 | |
| RegionR8 | -4.008 | 2.033 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.281 | 2.033 | 0.99993 | 1.00000 | |
| RegenerationR2 | -0.956 | 2.033 | 0.28940 | 0.73232 | |
| RegenerationR3 | -0.275 | 2.033 | 0.71743 | 0.95404 | |
| RegenerationR4 | -0.783 | 2.033 | 0.34507 | 0.77620 | |
| RegenerationR5 | -0.786 | 2.033 | 0.18194 | 0.61155 | |
| RegenerationR6 | -0.309 | 2.033 | 0.68565 | 0.91689 | |
| RegenerationBL | 1.966 | 2.033 | 0.22482 | 0.57392 | |
| RegenerationTP | 1.393 | 2.033 | 0.53882 | 0.92523 |
Genes with expression patterns similar to MligTC455_44018
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44018 | 92 | 1.91 | Mlig455_052409 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.446/0.02444 |
MRPL47 | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_052409 {REF} {Length: 2006} {TRANSSPLICED} {Pfam: Mitochondrial 39-S ribosomal protein L47 (MRP-L47) [PF06984.15, score=88.9]} {Human: ENSG00000136522, MRPL47, mitochondrial ribosomal protein L47, [RH, Score=89.4, Expect=3e-21]} {Mouse: ENSMUSG00000037531, Mrpl47, mitochondrial ribosomal protein L47, [RH, Score=92.4, Expect=2e-22]} {Dmel: FBgn0014023, mRpL47, mitochondrial ribosomal protein L47, [RH, Score=103, Expect=1e-26]} {Celegans: WBGene00015092, mrpl-47, Mitochondrial Ribosomal Protein, Large, [RH, Score=90.9, Expect=3e-22]} {Smed: dd_Smed_v6_1861_0_1, dd_Smed_v6_1861_0_1, [RH, Score=146, Expect=3e-44]} {RNA1509_15032} {RNA1310_28621} {RNA815_14114} |
| 2. | MligTC455_32353 | 256 | 5.33 | Mlig455_068474 | Neo: - Age: Up-Down-Up |
TBCK | 1.76 | - | - | - | - | 0.954 | 0.806 | Mlig455_068474 {REF} {Length: 3834} {TRANSSPLICED} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=118.5]; Rhodanese-like domain [PF00581.22, score=26.3]} {Human: ENSG00000145348, TBCK, TBC1 domain containing kinase, [RH, Score=369, Expect=2e-114]} {Mouse: ENSMUSG00000028030, Tbck, TBC1 domain containing kinase, [Score=388, Expect=4e-121]} {Dmel: FBgn0029736, CG4041, [RH, Score=308, Expect=3e-92]} {Celegans: WBGene00016352, tbck-1, TBC Kinase homolog, [RH, Score=168, Expect=6e-43]} {Smed: dd_Smed_v6_8735_0_1, dd_Smed_v6_8735_0_1, [RH, Score=225, Expect=4e-62]} {RNA1509_44248} {RNA1310_5322.1} {RNA815_1570} |
| 3. | MligTC455_50020 | 590 | 12.29 | Mlig455_050575 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-4.649 Region-enriched R4: 1.440/0.03021 |
NSD2 | 1.708 | 0.741 | - | - | - | 0.967 | - | Mlig455_050575 {REF} {Length: 4368} {TRANSSPLICED} {Pfam: AWS domain [PF17907.3, score=47.8]; SET domain [PF00856.30, score=36.1]; PHD-finger [PF00628.31, score=36.0]; NSD Cys-His rich domain [PF17982.3, score=33.7]; PWWP domain [PF00855.19, score=29.5]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=427, Expect=1e-130]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [Score=412, Expect=2e-124]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=430, Expect=1e-131]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=411, Expect=3e-122]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=246, Expect=2e-67]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=79.0, Expect=1e-14]} {Smed: dd_Smed_v6_4755_0_2, dd_Smed_v6_4755_0_2, [Score=290, Expect=8e-86]} {RNA1509_8385} {RNA1310_4002} {RNA815_849} |
| 4. | MligTC455_35978 | 454 | 9.45 | Mlig455_047915 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.942/0.03841 |
ECT2 | 1.678 | - | - | 0.725 | - | 0.953 | - | Mlig455_047915 {REF} {Length: 3280} {TRANSSPLICED} {Pfam: RhoGEF domain [PF00621.22, score=117.9]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=236, Expect=6e-65]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=233, Expect=4e-64]} {Dmel: FBgn0003041, pbl, pebble, [Score=206, Expect=6e-57]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [RH, Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_6109_0_1, dd_Smed_v6_6109_0_1, [Score=74.3, Expect=2e-13]} {RNA1509_13370, RNA1509_37662, RNA1509_53248, RNA1509_55596} {RNA1310_4384, RNA1509_13370, RNA1509_37662, RNA1509_53248, RNA1509_55596} {RNA1509_13370, RNA1509_37662, RNA1509_53248, RNA1509_55596, RNA815_5972} |
| 5. | MligTC455_11802 | 214 | 4.45 | Mlig455_002601 | Neo: Int S/G2/M Age: - |
0.987 | - | - | - | - | 0.987 | - | Mlig455_002601 {REF} {Length: 2904} {TRANSSPLICED} {Smed: dd_Smed_v6_2756_0_1, dd_Smed_v6_2756_0_1, [RH, Score=55.8, Expect=4e-08]} {RNA1509_17455} {RNA1310_8401.1} {RNA815_22037} | |
| 6. | MligTC455_49117 | 493 | 10.27 | Mlig455_033530 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.636/0.00055 |
MCMBP | 0.977 | - | - | - | - | 0.977 | - | Mlig455_033530 {REF} {Length: 3039} {TRANSSPLICED} {Pfam: Mini-chromosome maintenance replisome factor [PF09739.11, score=314.8]} {Human: ENSG00000197771, MCMBP, minichromosome maintenance complex binding protein, [RH, Score=201, Expect=3e-55]} {Mouse: ENSMUSG00000048170, Mcmbp, minichromosome maintenance complex binding protein, [RH, Score=200, Expect=2e-55]} {Dmel: FBgn0031875, CG3430, [RH, Score=188, Expect=2e-51]} {RNA1509_12390, RNA1509_33175, RNA1509_57235} {RNA1310_5415, RNA1509_12390, RNA1509_33175, RNA1509_57235} {RNA1509_12390, RNA1509_33175, RNA1509_57235, RNA815_3040} |
| 7. | MligTC455_12337 | 48 | 1 | Mlig455_033695 | Neo: - Age: Down-Up-Up Region-enriched R4: 4.547/0.01060 |
0.97 | - | 0.970 | - | - | - | - | Mlig455_033695 {REF} {Length: 1173} {RNA1509_11770} {RNA1310_67223} {RNA815_31938} | |
| 8. | MligTC455_50460 | 232 | 4.84 | Mlig455_050167 | Neo: Int S/G2/M Age: - Region-enriched R4: 2.509/0.04734 |
0.956 | - | - | 0.956 | - | - | - | Mlig455_050167 {REF} {Length: 2260} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778, RNA1509_44082, RNA1509_44517} {RNA1310_38674, RNA1509_44082, RNA1509_44517} {RNA1509_44082, RNA1509_44517, RNA815_25642} | |
| 9. | MligTC455_20752 | 228 | 4.76 | Mlig455_061284 | Neo: Irradiation Age: logFC(26M/2M)=0.470 Region-enriched R5: 4.621/0.00002 |
0.953 | - | 0.953 | - | - | - | - | Mlig455_061284 {REF} {Length: 4251} {Pfam: WWE domain [PF02825.22, score=21.0]} {RNA1509_28005} {RNA1310_3409.1} {RNA815_8747} |
Berezikov Lab - 2020-2021 © ERIBA