Data search
Results for MligTC455_44056
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44056 | 101 | 2.11 | Mlig455_007078 | Neo: - Age: Down-Down-Up |
PBX4 | Mlig455_007078 {REF} {Length: 2374} {Pfam: Homeobox KN domain [PF05920.13, score=45.0]; Homeodomain [PF00046.31, score=44.6]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=56.6, Expect=5e-08]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=55.5, Expect=8e-08]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=55.1, Expect=1e-07]; ENSMUSG00000031860, Pbx4, pre B cell leukemia homeobox 4, [Score=55.1, Expect=1e-07]; ENSMUSG00000038718, Pbx3, pre B cell leukemia homeobox 3, [Score=53.1, Expect=4e-07]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=52.8, Expect=6e-07]} {Dmel: FBgn0000611, exd, extradenticle, [Score=56.2, Expect=4e-08]} {Celegans: WBGene00000443, ceh-20, Homeobox protein ceh-20, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=97.4, Expect=9e-22]} {RNA1310_13235} {RNA815_16233} |
Cumulative graph for MligTC455_44056
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 1.359 | 1.935 | 0.53765 | 1.00000 | |
| RegionR2 | 0.367 | 1.935 | 0.64422 | 0.98120 | |
| RegionR3 | 0.125 | 1.935 | 0.75171 | 1.00000 | |
| RegionR4 | 0.924 | 1.935 | 0.35834 | 0.68114 | |
| RegionR5 | 0.194 | 1.935 | 0.71289 | 1.00000 | |
| RegionR6 | 1.106 | 1.935 | 0.21743 | 0.79646 | |
| RegionR7 | 0.255 | 1.935 | 0.73289 | 1.00000 | |
| RegionR8 | -4.331 | 1.935 | 0.20473 | 0.80451 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.553 | 1.935 | 0.34631 | 1.00000 | |
| RegenerationR2 | -0.323 | 1.935 | 0.61604 | 0.92196 | |
| RegenerationR3 | 0.397 | 1.935 | 0.61788 | 0.91571 | |
| RegenerationR4 | -0.564 | 1.935 | 0.49031 | 0.86483 | |
| RegenerationR5 | -0.063 | 1.935 | 0.93834 | 1.00000 | |
| RegenerationR6 | 0.31 | 1.935 | 0.67168 | 0.90955 | |
| RegenerationBL | 2.255 | 1.935 | 0.10924 | 0.39015 | |
| RegenerationTP | 2.013 | 1.935 | 0.34645 | 0.78809 |
Genes with expression patterns similar to MligTC455_44056
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44056 | 101 | 2.11 | Mlig455_007078 | Neo: - Age: Down-Down-Up |
PBX4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_007078 {REF} {Length: 2374} {Pfam: Homeobox KN domain [PF05920.13, score=45.0]; Homeodomain [PF00046.31, score=44.6]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=56.6, Expect=5e-08]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=55.5, Expect=1e-07]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=55.5, Expect=8e-08]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=55.1, Expect=1e-07]; ENSMUSG00000031860, Pbx4, pre B cell leukemia homeobox 4, [Score=55.1, Expect=1e-07]; ENSMUSG00000038718, Pbx3, pre B cell leukemia homeobox 3, [Score=53.1, Expect=4e-07]; ENSMUSG00000041420, Meis3, Meis homeobox 3, [Score=52.8, Expect=6e-07]} {Dmel: FBgn0000611, exd, extradenticle, [Score=56.2, Expect=4e-08]} {Celegans: WBGene00000443, ceh-20, Homeobox protein ceh-20, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=97.4, Expect=9e-22]} {RNA1310_13235} {RNA815_16233} |
| 2. | MligTC455_44914 | 126 | 2.63 | Mlig455_002960 | Neo: - Age: Down-Up-Down Region-enriched R2: 4.561/0.00718 |
0.973 | - | - | - | 0.973 | - | - | Mlig455_002960 {REF} {Length: 2090} {RNA1310_31218} {RNA815_36991} | |
| 3. | MligTC455_32259 | 97 | 2.02 | Mlig455_036111 | Neo: - Age: - |
ANKRD28 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_036111 {REF} {Length: 2994} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=126.9]; Ankyrin repeats (many copies) [PF13637.8, score=108.3]; Ankyrin repeat [PF00023.32, score=99.0]; Ankyrin repeat [PF13606.8, score=92.1]; Ankyrin repeats (many copies) [PF13857.8, score=83.4]; Mab-21 protein [PF03281.16, score=39.5]} {Human: ENSG00000206560, ANKRD28, ankyrin repeat domain 28, [Score=106, Expect=9e-23]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=106, Expect=5e-24]; ENSG00000029534, ANK1, ankyrin 1, [Score=104, Expect=6e-22]; ENSG00000151150, ANK3, ankyrin 3, [Score=102, Expect=4e-21]; ENSG00000196730, DAPK1, death associated protein kinase 1, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000021559, Dapk1, death associated protein kinase 1, [Score=111, Expect=3e-24]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=110, Expect=4e-24]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=107, Expect=3e-23]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=101, Expect=2e-21]} {Smed: dd_Smed_v6_10835_0_2, dd_Smed_v6_10835_0_2, [Score=105, Expect=7e-23]} {RNA1310_24797.1} {RNA815_3666.1} |
| 4. | MligTC455_43230 | 1406 | 29.28 | Mlig455_053409 | Neo: - Age: - Region-enriched R8: 2.330/0.00584 Regeneration-upregulated BL: 1.849 Regeneration-enriched BL: 1.849 |
0.959 | - | - | - | 0.959 | - | - | Mlig455_053409 {REF} {Length: 4778} {RNA1509_11530} {RNA1310_21003, RNA1509_11530} {RNA1509_11530, RNA815_13912} | |
| 5. | MligTC455_23491 | 83 | 1.73 | Mlig455_059101 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_059101 {REF} {Length: 2808} {TRANSSPLICED} {RNA1509_38122} {RNA1310_8876.1} {RNA815_14615.1} | |
| 6. | MligTC455_28555 | 320 | 6.67 | Mlig455_000427, Mlig455_000527 | Neo: Irradiation Age: - Region-enriched R5: 1.876/0.04093 Regeneration-upregulated BL: 4.504 Regeneration-enriched BL: 4.504 |
ZFP1 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_000427 {REF} {Length: 2108} {Pfam: Zinc-finger double domain [PF13465.8, score=69.7]; Zinc finger, C2H2 type [PF00096.28, score=65.3]; C2H2-type zinc finger [PF13894.8, score=55.2]; C2H2-type zinc finger [PF13912.8, score=23.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.1]} {Human: ENSG00000285178, ZFP1, ZFP1 zinc finger protein, [Score=116, Expect=7e-29]; ENSG00000184517, ZFP1, ZFP1 zinc finger protein, [Score=116, Expect=7e-29]; ENSG00000214029, ZNF891, zinc finger protein 891, [Score=115, Expect=7e-28]; ENSG00000269343, ZNF587B, zinc finger protein 587B, [Score=113, Expect=1e-27]; ENSG00000145908, ZNF300, zinc finger protein 300, [Score=113, Expect=5e-27]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=112, Expect=9e-27]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000055835, Zfp1, zinc finger protein 1, [Score=115, Expect=6e-29]; ENSMUSG00000057835, Zfp119a, zinc finger protein 119a, [Score=111, Expect=1e-26]; ENSMUSG00000012640, Zfp715, zinc finger protein 715, [Score=111, Expect=2e-26]; ENSMUSG00000037001, Zfp39, zinc finger protein 39, [Score=110, Expect=2e-26]; ENSMUSG00000071302, 2610044O15Rik8, RIKEN cDNA 2610044O15 gene, [Score=110, Expect=8e-27]; ENSMUSG00000029729, Zkscan1, zinc finger with KRAB and SCAN domains 1, [Score=110, Expect=1e-26]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=97.8, Expect=2e-22]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=88.2, Expect=1e-19]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=86.3, Expect=5e-20]} {RNA1509_26395} {RNA1310_3136.1} {RNA815_17282} Mlig455_000527 {REF} {Length: 1874} {Pfam: Zinc-finger double domain [PF13465.8, score=72.5]; Zinc finger, C2H2 type [PF00096.28, score=64.1]; C2H2-type zinc finger [PF13894.8, score=55.6]; C2H2-type zinc finger [PF13912.8, score=27.0]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.3]} {Human: ENSG00000184517, ZFP1, ZFP1 zinc finger protein, [Score=117, Expect=2e-29]; ENSG00000285178, ZFP1, ZFP1 zinc finger protein, [Score=117, Expect=2e-29]; ENSG00000214029, ZNF891, zinc finger protein 891, [Score=115, Expect=6e-28]; ENSG00000145908, ZNF300, zinc finger protein 300, [Score=114, Expect=1e-27]; ENSG00000197128, ZNF772, zinc finger protein 772, [Score=112, Expect=3e-27]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=112, Expect=8e-27]; ENSG00000245680, ZNF585B, zinc finger protein 585B, [Score=112, Expect=1e-26]} {Mouse: ENSMUSG00000055835, Zfp1, zinc finger protein 1, [Score=117, Expect=1e-29]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=98.2, Expect=2e-22]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=88.2, Expect=1e-19]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=86.7, Expect=4e-20]} {RNA1509_26395} {RNA1310_3136.2} {RNA815_10241} |
| 7. | MligTC455_40306 | 48 | 1.01 | Mlig455_002742, Mlig455_011497 | Neo: - Age: - |
0.956 | - | - | - | 0.956 | - | - | Mlig455_002742 {REF} {Length: 449} {NoTransDecoderORF} {RNA1310_120538} Mlig455_011497 {REF} {Length: 438} {NoTransDecoderORF} {RNA1310_120538} |
|
| 8. | MligTC455_52305 | 908 | 18.92 | Mlig455_067955 | Neo: - Age: - Regeneration-upregulated BL: 2.181 Regeneration-enriched BL: 2.181 |
0.956 | - | - | - | 0.956 | - | - | Mlig455_067955 {REF} {Length: 2395} {RNA1509_46851} {RNA1310_2054} {RNA815_12410} | |
| 9. | MligTC455_43020 | 180 | 3.74 | Mlig455_066595 | Neo: Int S/G2/M Age: - |
TRIT1 | 0.955 | - | - | - | 0.955 | - | - | Mlig455_066595 {REF} {Length: 5766} {TRANSSPLICED} {Pfam: IPP transferase [PF01715.19, score=210.8]; AAA ATPase domain [PF13191.8, score=23.1]; Isopentenyl transferase [PF01745.18, score=20.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.3]; AAA domain [PF13671.8, score=19.0]} {Human: ENSG00000043514, TRIT1, tRNA isopentenyltransferase 1, [RH, Score=285, Expect=1e-90]} {Mouse: ENSMUSG00000028653, Trit1, tRNA isopentenyltransferase 1, [RH, Score=288, Expect=6e-92]} {Dmel: FBgn0043799, CG31381, [RH, Score=252, Expect=5e-78]} {Celegans: WBGene00001740, gro-1, tRNA isopentenyl transferase, [RH, Score=188, Expect=2e-54]} {Smed: dd_Smed_v6_11495_0_1, dd_Smed_v6_11495_0_1, [RH, Score=239, Expect=5e-74]} {RNA1509_51518} {RNA1310_17884} {RNA815_5793.1} |
| 10. | MligTC455_39260 | 117 | 2.44 | Mlig455_036510 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_036510 {REF} {Length: 1933} {RNA1509_55500} {RNA1310_46864} {RNA815_57446} | |
| 11. | MligTC455_30224 | 418 | 8.7 | Mlig455_045910, Mlig455_046402, Mlig455_049019 | Neo: Irradiation Age: Down-Down-Down |
PIF1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_045910 {REF} {Length: 11950} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.9]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=3e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=705, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=3e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} Mlig455_046402 {REF} {Length: 7812} {Pfam: PIF1-like helicase [PF05970.16, score=335.0]; Helitron helicase-like domain at N-terminus [PF14214.8, score=174.8]; AAA domain [PF13604.8, score=45.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=6e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=121, Expect=1e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=120, Expect=2e-27]} {Celegans: WBGene00022692, ZK250.9, [Score=736, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=116, Expect=2e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} Mlig455_049019 {REF} {Length: 5908} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=335.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=175.7]; AAA domain [PF13604.8, score=46.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=25.3]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=125, Expect=1e-28]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=120, Expect=2e-27]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=121, Expect=7e-28]} {Celegans: WBGene00022692, ZK250.9, [Score=734, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=117, Expect=1e-26]} {RNA1509_5036} {RNA1310_728.1} {RNA815_356.1} |
| 12. | MligTC455_35587 | 81 | 1.69 | Mlig455_026694, Mlig455_043710 | Neo: - |
RTL1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_026694 {REF} {Length: 1354} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=23.9]; Aspartyl protease [PF13650.8, score=20.6]} {RNA1509_52151} {RNA1310_16257} {RNA815_12222} Mlig455_043710 {REF} {Length: 4315} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=82.6]; Integrase zinc binding domain [PF17921.3, score=59.2]; Integrase core domain [PF00665.28, score=49.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.9]; H2C2 zinc finger [PF09337.12, score=20.3]; Aspartyl protease [PF13650.8, score=19.2]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=80.5, Expect=2e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=61.2, Expect=1e-08]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=325, Expect=1e-93]} {RNA1509_52151} {RNA1310_5165, RNA1509_52151} {RNA1509_52151, RNA815_12222} |
| 13. | MligTC455_21224 | 54 | 1.12 | Mlig455_017282 | Neo: Int S/G2/M Age: - |
PKD1L2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_017282 {REF} {Length: 6154} {Pfam: PLAT/LH2 domain [PF01477.25, score=21.6]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [Score=83.2, Expect=4e-15]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=76.3, Expect=3e-13]; ENSMUSG00000048827, Pkd1l3, polycystic kidney disease 1 like 3, [Score=75.9, Expect=5e-13]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=75.5, Expect=6e-13]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=66.6, Expect=1e-10]} {RNA1509_27380} {RNA1310_81531} {RNA815_1311.2} |
| 14. | MligTC455_43774 | 24 | 0.51 | Mlig455_040993 | Neo: - Age: - |
0.95 | - | - | - | 0.950 | - | - | Mlig455_040993 {REF} {Length: 647} {NoTransDecoderORF} {RNA1310_120140} |