TomoSeq data search

Data search

Results for MligTC455_44058

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44058

171

3.56

Mlig455_026616

Neo: -

Age: -

Mlig455_026616 {REF} {Length: 3779} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=53.9, Expect=3e-07]} {Dmel: FBgn0038397, CG10185, [Score=64.7, Expect=1e-10]} {Celegans: WBGene00020254, T05C3.2, [Score=62.8, Expect=3e-10]} {RNA1509_32549, RNA1509_58134} {RNA1310_736.2, RNA1509_32549} {RNA1509_32549, RNA815_218}

Cumulative graph for MligTC455_44058

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.551	2.354	0.20989	0.84940
RegionR2	0.298	2.354	0.74103	1.00000
RegionR3	1.918	2.354	0.01816	0.22313
RegionR4	2.017	2.354	0.06720	0.23542
RegionR5	0.885	2.354	0.37482	0.72799
RegionR6	0.927	2.354	0.35527	0.93965
RegionR7	-0.734	2.354	0.97650	1.00000
RegionR8	0.24	2.354	0.78633	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.921	2.354	0.21886	0.95476
RegenerationR2	-0.211	2.354	0.75649	0.97536
RegenerationR3	-1.659	2.354	0.02054	0.26212
RegenerationR4	-0.706	2.354	0.38797	0.80617
RegenerationR5	0.195	2.354	0.79596	0.98745
RegenerationR6	-1.191	2.354	0.16587	0.49638
RegenerationBL	0.116	2.354	0.91417	1.00000
RegenerationTP	0.936	2.354	0.38183	0.81682

Genes with expression patterns similar to MligTC455_44058

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44058	171	3.56	Mlig455_026616	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_026616 {REF} {Length: 3779} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=53.9, Expect=3e-07]} {Dmel: FBgn0038397, CG10185, [Score=64.7, Expect=1e-10]} {Celegans: WBGene00020254, T05C3.2, [Score=62.8, Expect=3e-10]} {RNA1509_32549, RNA1509_58134} {RNA1310_736.2, RNA1509_32549} {RNA1509_32549, RNA815_218}
2.	MligTC455_44059	151	3.14	Mlig455_039109	Neo: - Age: -	NWD1	4.664	-	0.949	0.990	0.828	0.935	0.962	Mlig455_039109 {REF} {Length: 6668} {TRANSSPLICED} {Pfam: NACHT domain [PF05729.14, score=41.2]; AAA ATPase domain [PF13191.8, score=32.6]; WD domain, G-beta repeat [PF00400.34, score=27.1]; AAA domain [PF13401.8, score=22.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=22.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.3]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=238, Expect=1e-62]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=218, Expect=1e-56]} {Dmel: FBgn0038397, CG10185, [Score=298, Expect=1e-81]} {Celegans: WBGene00020254, T05C3.2, [Score=274, Expect=3e-74]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [Score=193, Expect=3e-49]} {RNA1509_47458, RNA1509_6052} {RNA1310_736.1, RNA1509_47458} {RNA1509_47458, RNA815_218}
3.	MligTC455_52466	335	6.97	Mlig455_004508	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.550	C11orf1	3.151	-	0.703	0.724	0.772	-	0.952	Mlig455_004508 {REF} {Length: 1436} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=54.2]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=52.0, Expect=4e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=52.8, Expect=4e-09]} {RNA1509_43512, RNA1509_59783} {RNA1310_47813.1, RNA1509_43512, RNA1509_59783} {RNA1509_43512, RNA1509_59783, RNA815_26980.2}
4.	MligTC455_49023	593	12.35	Mlig455_008741	Neo: - Age: -		1.791	0.951	-	-	-	-	0.840	Mlig455_008741 {REF} {Length: 1695} {Pfam: Low-density lipoprotein receptor domain class A [PF00057.20, score=24.8]; Lipopolysaccharide assembly protein A domain [PF06305.13, score=18.8]} {Smed: dd_Smed_v6_2114_0_1, dd_Smed_v6_2114_0_1, [RH, Score=129, Expect=3e-35]} {RNA1509_42918} {RNA1310_17906} {RNA815_7308.1}
5.	MligTC455_19340	363	7.56	Mlig455_009693, Mlig455_063049	Neo: - Age: logFC(26M/2M)=-0.624	BEST3	1.767	0.796	-	-	-	-	0.971	Mlig455_009693 {REF} {Length: 3901} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=273.3]} {Human: ENSG00000127325, BEST3, bestrophin 3, [RH, Score=372, Expect=1e-116]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [RH, Score=369, Expect=5e-116]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [RH, Score=328, Expect=2e-99]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [RH, Score=285, Expect=5e-85]} {Smed: dd_Smed_v6_9978_0_1, dd_Smed_v6_9978_0_1, [RH, Score=286, Expect=2e-88]} {RNA1509_5310} {RNA1310_4090.1} {RNA815_22135} Mlig455_063049 {REF} {Length: 3533} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=273.3]} {Human: ENSG00000127325, BEST3, bestrophin 3, [RH, Score=372, Expect=1e-116]} {Mouse: ENSMUSG00000020169, Best3, bestrophin 3, [RH, Score=370, Expect=4e-116]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [RH, Score=328, Expect=2e-99]} {Celegans: WBGene00015286, best-3, Bestrophin homolog, [RH, Score=285, Expect=6e-85]} {Smed: dd_Smed_v6_9978_0_1, dd_Smed_v6_9978_0_1, [RH, Score=286, Expect=2e-88]} {RNA1509_5310} {RNA1310_4090.1, RNA1509_5310} {RNA1509_5310, RNA815_22135}
6.	MligTC455_23485	1836	38.25	Mlig455_061786, Mlig455_061826	Neo: - Age: Down-Up-Up Region-enriched R4: 2.095/0.01808	SRI	1.677	0.955	-	-	-	-	0.722	Mlig455_061786 {REF} {Length: 1152} {Pfam: EF hand [PF00036.34, score=44.0]; EF-hand domain [PF13405.8, score=40.5]; EF-hand domain pair [PF13499.8, score=33.0]; EF hand [PF13202.8, score=25.4]} {Human: ENSG00000075142, SRI, sorcin, [Score=120, Expect=1e-33]; ENSG00000115271, GCA, grancalcin, [Score=118, Expect=2e-32]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=122, Expect=3e-34]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=79.3, Expect=4e-18]} {Celegans: WBGene00019770, M04F3.4, [Score=77.0, Expect=2e-17]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=90.5, Expect=1e-22]} {RNA1509_11825, RNA1509_34431} {RNA1310_25008.1, RNA1509_11825, RNA1509_34431} {RNA1509_11825, RNA1509_34431, RNA815_21609} Mlig455_061826 {REF} {Length: 1102} {Pfam: EF hand [PF00036.34, score=44.0]; EF-hand domain [PF13405.8, score=40.6]; EF-hand domain pair [PF13499.8, score=33.0]; EF hand [PF13202.8, score=25.4]} {Human: ENSG00000075142, SRI, sorcin, [Score=120, Expect=1e-33]; ENSG00000115271, GCA, grancalcin, [Score=118, Expect=2e-32]} {Mouse: ENSMUSG00000003161, Sri, sorcin, [Score=121, Expect=3e-34]} {Dmel: FBgn0086378, Alg-2, Apoptosis-linked gene-2, [Score=79.3, Expect=4e-18]} {Celegans: WBGene00019770, M04F3.4, [Score=76.6, Expect=2e-17]} {Smed: dd_Smed_v6_3585_0_1, dd_Smed_v6_3585_0_1, [Score=90.5, Expect=1e-22]} {RNA1509_11825} {RNA1310_25008.1} {RNA815_21609}
7.	MligTC455_21674	277	5.77	Mlig455_024646	Neo: - Age: Up-Down-Up	C2orf16	0.983	-	-	-	-	-	0.983	Mlig455_024646 {REF} {Length: 1253} {Human: ENSG00000221843, C2orf16, chromosome 2 open reading frame 16, [Score=51.2, Expect=6e-08]} {RNA1509_24459} {RNA1310_17905} {RNA815_3110}
8.	MligTC455_22444	563	11.73	Mlig455_002477	Neo: - Age: Up-Down-Down		0.97	-	-	-	-	-	0.970	Mlig455_002477 {REF} {Length: 4129} {Pfam: TIR domain [PF13676.8, score=78.3]; Domain of unknown function (DUF4441) [PF14536.8, score=21.3]; Subunit CCDC53 of WASH complex [PF10152.11, score=19.8]; Protein of unknown function (DUF775) [PF05603.14, score=19.2]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=159, Expect=1e-40]} {RNA1509_15248} {RNA1310_4628} {RNA815_1374}
9.	MligTC455_21675	449	9.35	Mlig455_043986, Mlig455_043987, Mlig455_050701	Neo: - Age: Up-Up-Down	NCOA7, OXR1	0.969	-	-	-	-	-	0.969	Mlig455_043986 {REF} {Length: 4824} {Pfam: TLD [PF07534.18, score=31.7]} {Human: ENSG00000111912, NCOA7, nuclear receptor coactivator 7, [Score=92.4, Expect=4e-20]} {Mouse: ENSMUSG00000039697, Ncoa7, nuclear receptor coactivator 7, [Score=86.7, Expect=3e-18]} {Dmel: FBgn0013576, mtd, mustard, [Score=93.6, Expect=7e-21]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [Score=89.4, Expect=1e-19]} {Smed: dd_Smed_v6_5399_0_1, dd_Smed_v6_5399_0_1, [Score=87.8, Expect=3e-19]} {RNA1509_40734} {RNA1310_2824.1} {RNA815_14736} Mlig455_043987 {REF} {Length: 700} {TRANSSPLICED} {Pfam: TLD [PF07534.18, score=66.8]; LysM domain [PF01476.22, score=29.9]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [Score=119, Expect=9e-28]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [Score=119, Expect=2e-27]} {Dmel: FBgn0013576, mtd, mustard, [Score=122, Expect=3e-28]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [RH, Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_6537_0_1, dd_Smed_v6_6537_0_1, [Score=114, Expect=3e-26]} {RNA1509_59086} {RNA1310_7938} {RNA815_21372} Mlig455_050701 {REF} {Length: 5962} {TRANSSPLICED} {Pfam: LysM domain [PF01476.22, score=31.1]} {Human: ENSG00000164830, OXR1, oxidation resistance 1, [Score=120, Expect=2e-29]} {Mouse: ENSMUSG00000022307, Oxr1, oxidation resistance 1, [Score=119, Expect=5e-30]} {Dmel: FBgn0013576, mtd, mustard, [Score=119, Expect=4e-29]} {Celegans: WBGene00018700, lmd-3, LysM Domain (Peptidoglycan binding) protein, [RH, Score=104, Expect=2e-24]} {Smed: dd_Smed_v6_5399_0_2, dd_Smed_v6_5399_0_2, [Score=50.8, Expect=5e-07]} {RNA1509_59086} {RNA1310_2824.1} {RNA815_14736}
10.	MligTC455_18050	570	11.88	Mlig455_055052	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_055052 {REF} {Length: 950} {Pfam: PLAC8 family [PF04749.19, score=73.5]; Uncharacterized protein conserved in archaea (DUF2180) [PF09947.11, score=18.7]} {Smed: dd_Smed_v6_743_0_1, dd_Smed_v6_743_0_1, [Score=111, Expect=4e-33]} {RNA1509_44969} {RNA1310_55602} {RNA815_30798}
11.	MligTC455_07684	42	0.88	Mlig455_022129	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_022129 {REF} {Length: 443} {NoTransDecoderORF} {RNA1310_69626}
12.	MligTC455_33842	492	10.26	Mlig455_004899	Neo: - Age: - Region-enriched R2: 2.178/0.01972	CDKL1	0.958	-	-	-	-	-	0.958	Mlig455_004899 {REF} {Length: 2500} {Pfam: Protein kinase domain [PF00069.27, score=247.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=116.6]; Haspin like kinase domain [PF12330.10, score=18.7]; ABC1 atypical kinase-like domain [PF03109.18, score=18.6]} {Human: ENSG00000100490, CDKL1, cyclin dependent kinase like 1, [RH, Score=429, Expect=3e-150]; ENSG00000205111, CDKL4, cyclin dependent kinase like 4, [RH, Score=422, Expect=2e-148]} {Mouse: ENSMUSG00000020990, Cdkl1, cyclin-dependent kinase-like 1 (CDC2-related kinase), [RH, Score=432, Expect=7e-152]; ENSMUSG00000033966, Cdkl4, cyclin-dependent kinase-like 4, [RH, Score=423, Expect=3e-148]} {Dmel: FBgn0031730, CG7236, [RH, Score=381, Expect=6e-131]} {Celegans: WBGene00012779, cdkl-1, Cyclin-Dependent Kinase-Like, [RH, Score=396, Expect=4e-136]} {Smed: dd_Smed_v6_9353_0_1, dd_Smed_v6_9353_0_1, [RH, Score=481, Expect=5e-171]} {RNA1509_19679} {RNA1310_6686.1} {RNA815_5397}
13.	MligTC455_20536	1039	21.64	Mlig455_023810	Neo: Irradiation Age: -	CPPED1	0.956	-	-	-	-	0.956	-	Mlig455_023810 {REF} {Length: 1933} {TRANSSPLICED} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=34.7]} {Human: ENSG00000103381, CPPED1, calcineurin like phosphoesterase domain containing 1, [RH, Score=228, Expect=1e-72]} {Mouse: ENSMUSG00000065979, Cpped1, calcineurin-like phosphoesterase domain containing 1, [RH, Score=229, Expect=2e-73]} {Smed: dd_Smed_v6_1690_0_2, dd_Smed_v6_1690_0_2, [RH, Score=233, Expect=2e-75]} {RNA1509_11740} {RNA1310_27956, RNA1509_11740} {RNA1509_11740, RNA815_11890.1}
14.	MligTC455_22787	634	13.2	Mlig455_002876	Neo: - Age: - Regeneration-upregulated BL: 4.427 Regeneration-enriched BL: 4.427		0.954	-	-	-	-	0.954	-	Mlig455_002876 {REF} {Length: 2039} {RNA1509_1857, RNA1509_24314, RNA1509_2481, RNA1509_9038} {RNA1310_47743.1, RNA1509_1857, RNA1509_24314, RNA1509_2481, RNA1509_9038} {RNA1509_1857, RNA1509_24314, RNA1509_2481, RNA1509_9038, RNA815_20164.1}
15.	MligTC455_42870	1026	21.37	Mlig455_056165, Mlig455_058737	Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.245 Regeneration-upregulated BL: 1.683 Regeneration-enriched BL: 1.683	NABP2	0.954	-	-	-	0.954	-	-	Mlig455_056165 {REF} {Length: 1154} {TRANSSPLICED} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=21.2]} {Human: ENSG00000139579, NABP2, nucleic acid binding protein 2, [RH, Score=123, Expect=6e-36]; ENSG00000173559, NABP1, nucleic acid binding protein 1, [RH, Score=120, Expect=7e-34]} {Mouse: ENSMUSG00000025374, Nabp2, nucleic acid binding protein 2, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0031909, CG5181, [RH, Score=103, Expect=1e-27]} {Celegans: WBGene00015554, C06G3.8, [RH, Score=70.9, Expect=6e-16]} {Smed: dd_Smed_v6_5637_0_1, dd_Smed_v6_5637_0_1, [RH, Score=96.7, Expect=4e-26]} {RNA1509_45265} {RNA1310_28476} {RNA815_13256} Mlig455_058737 {REF} {Length: 1399} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=21.2]} {Human: ENSG00000139579, NABP2, nucleic acid binding protein 2, [RH, Score=123, Expect=6e-36]; ENSG00000173559, NABP1, nucleic acid binding protein 1, [RH, Score=120, Expect=7e-34]} {Mouse: ENSMUSG00000025374, Nabp2, nucleic acid binding protein 2, [RH, Score=122, Expect=2e-35]} {Dmel: FBgn0031909, CG5181, [RH, Score=103, Expect=1e-27]} {Celegans: WBGene00015554, C06G3.8, [RH, Score=70.9, Expect=6e-16]} {Smed: dd_Smed_v6_5637_0_1, dd_Smed_v6_5637_0_1, [RH, Score=96.7, Expect=4e-26]} {RNA1509_20132, RNA1509_32635, RNA1509_45265} {RNA1310_28476, RNA1509_20132, RNA1509_32635, RNA1509_45265} {RNA1509_20132, RNA1509_32635, RNA1509_45265, RNA815_13256}
16.	MligTC455_22005	526	10.95	Mlig455_050414	Neo: - Age: Up-Up-Down, logFC(26M/2M)=-0.420	AP1G1	0.952	-	-	-	-	0.952	-	Mlig455_050414 {REF} {Length: 4257} {TRANSSPLICED} {Pfam: Adaptin N terminal region [PF01602.22, score=327.1]; Adaptin C-terminal domain [PF02883.22, score=77.7]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=45.1]} {Human: ENSG00000166747, AP1G1, adaptor related protein complex 1 subunit gamma 1, [Score=669, Expect=0.0]} {Mouse: ENSMUSG00000031731, Ap1g1, adaptor protein complex AP-1, gamma 1 subunit, [Score=669, Expect=0.0]} {Dmel: FBgn0030089, AP-1gamma, Adaptor Protein complex 1, gamma subunit, [Score=556, Expect=0.0]} {Celegans: WBGene00000158, apg-1, AdaPtin, Gamma chain (Clathrin associated complex), [Score=564, Expect=0.0]} {Smed: dd_Smed_v6_2681_0_1, dd_Smed_v6_2681_0_1, [Score=711, Expect=0.0]} {RNA1509_13881} {RNA1310_4552} {RNA815_5877}
17.	MligTC455_26656	215	4.48	Mlig455_067721	Neo: - Age: -		0.951	-	-	-	0.951	-	-	Mlig455_067721 {REF} {Length: 3295} {Pfam: Domain of unknown function (DUF1868) [PF08975.12, score=30.6]} {RNA1509_48474} {RNA1310_38237, RNA1509_48474} {RNA1509_48474, RNA815_31773}
18.	MligTC455_51061	187	3.9	Mlig455_049903	Neo: - Age: -	CTTNBP2NL	0.951	-	-	-	-	0.951	-	Mlig455_049903 {REF} {Length: 3522} {Pfam: Cortactin-binding protein-2 [PF09727.11, score=163.7]} {Human: ENSG00000143079, CTTNBP2NL, CTTNBP2 N-terminal like, [RH, Score=127, Expect=2e-31]} {Mouse: ENSMUSG00000062127, Cttnbp2nl, CTTNBP2 N-terminal like, [RH, Score=128, Expect=1e-31]} {Dmel: FBgn0034308, CG10915, [RH, Score=105, Expect=2e-24]} {Celegans: WBGene00016792, C49H3.6, [RH, Score=112, Expect=9e-27]} {Smed: dd_Smed_v6_6806_0_1, dd_Smed_v6_6806_0_1, [RH, Score=163, Expect=6e-45]} {RNA1509_11660, RNA1509_34947, RNA1509_37293} {RNA1310_21789, RNA1509_11660, RNA1509_34947, RNA1509_37293} {RNA1509_11660, RNA1509_34947, RNA1509_37293, RNA815_10227}

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