TomoSeq data search

Data search

Results for MligTC455_44065

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44065	713	14.85	Mlig455_023161	Neo: - Age: Up-Down-Down	SEC16A	Mlig455_023161 {REF} {Length: 5652} {Pfam: Sec23-binding domain of Sec16 [PF12931.9, score=94.2]} {Human: ENSG00000148396, SEC16A, SEC16 homolog A, endoplasmic reticulum export factor, [Score=141, Expect=2e-33]; ENSG00000120341, SEC16B, SEC16 homolog B, endoplasmic reticulum export factor, [Score=136, Expect=6e-32]} {Mouse: ENSMUSG00000026924, Sec16a, SEC16 homolog A, endoplasmic reticulum export factor, [Score=147, Expect=2e-35]} {Dmel: FBgn0052654, Sec16, Secretory 16, [Score=115, Expect=8e-26]} {Smed: dd_Smed_v6_1873_0_4, dd_Smed_v6_1873_0_4, [Score=135, Expect=2e-32]} {RNA1509_13987} {RNA1310_4170} {RNA815_36187}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44065

713

14.85

Mlig455_023161

Neo: -

Age: Up-Down-Down

SEC16A

Mlig455_023161 {REF} {Length: 5652} {Pfam: Sec23-binding domain of Sec16 [PF12931.9, score=94.2]} {Human: ENSG00000148396, SEC16A, SEC16 homolog A, endoplasmic reticulum export factor, [Score=141, Expect=2e-33]; ENSG00000120341, SEC16B, SEC16 homolog B, endoplasmic reticulum export factor, [Score=136, Expect=6e-32]} {Mouse: ENSMUSG00000026924, Sec16a, SEC16 homolog A, endoplasmic reticulum export factor, [Score=147, Expect=2e-35]} {Dmel: FBgn0052654, Sec16, Secretory 16, [Score=115, Expect=8e-26]} {Smed: dd_Smed_v6_1873_0_4, dd_Smed_v6_1873_0_4, [Score=135, Expect=2e-32]} {RNA1509_13987} {RNA1310_4170} {RNA815_36187}

Cumulative graph for MligTC455_44065

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.57	4.258	0.51760	1.00000
RegionR2	-0.233	4.258	0.61875	0.96385
RegionR3	0.403	4.258	0.25727	0.80158
RegionR4	0.487	4.258	0.21333	0.49952
RegionR5	0.377	4.258	0.24703	0.56121
RegionR6	0.365	4.258	0.32136	0.91052
RegionR7	0.143	4.258	0.76449	1.00000
RegionR8	-2.112	4.258	0.01145	0.20378

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.837	4.258	0.02370	0.59347
RegenerationR2	0.767	4.258	0.03662	0.31636
RegenerationR3	0.178	4.258	0.65033	0.92923
RegenerationR4	-0.083	4.258	0.83175	0.99773
RegenerationR5	0.342	4.258	0.34216	0.75901
RegenerationR6	0.405	4.258	0.29623	0.64668
RegenerationBL	0.677	4.258	0.22308	0.57187
RegenerationTP	0.173	4.258	0.80969	1.00000

Genes with expression patterns similar to MligTC455_44065

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44065	713	14.85	Mlig455_023161	Neo: - Age: Up-Down-Down	SEC16A	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023161 {REF} {Length: 5652} {Pfam: Sec23-binding domain of Sec16 [PF12931.9, score=94.2]} {Human: ENSG00000148396, SEC16A, SEC16 homolog A, endoplasmic reticulum export factor, [Score=141, Expect=2e-33]; ENSG00000120341, SEC16B, SEC16 homolog B, endoplasmic reticulum export factor, [Score=136, Expect=6e-32]} {Mouse: ENSMUSG00000026924, Sec16a, SEC16 homolog A, endoplasmic reticulum export factor, [Score=147, Expect=2e-35]} {Dmel: FBgn0052654, Sec16, Secretory 16, [Score=115, Expect=8e-26]} {Smed: dd_Smed_v6_1873_0_4, dd_Smed_v6_1873_0_4, [Score=135, Expect=2e-32]} {RNA1509_13987} {RNA1310_4170} {RNA815_36187}
2.	MligTC455_45455	1171	24.39	Mlig455_028595, Mlig455_028612, Mlig455_028632, Mlig455_056925	Neo: Int S/G2/M Age: -	BOP1	0.95	-	-	-	-	0.950	-	Mlig455_028595 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_17129} {RNA1310_82520} {RNA815_46682} Mlig455_028612 {REF} {Length: 3936} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=319.2]; WD domain, G-beta repeat [PF00400.34, score=46.6]} {Human: ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=471, Expect=2e-156]; ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=471, Expect=2e-156]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=461, Expect=8e-153]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=4e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=447, Expect=2e-148]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=306, Expect=6e-94]} {RNA1509_7833} {RNA1310_11209.1, RNA1509_7833} {RNA1509_7833, RNA815_3705} Mlig455_028632 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=318.7]; WD domain, G-beta repeat [PF00400.34, score=46.6]} {Human: ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=472, Expect=1e-156]; ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=472, Expect=1e-156]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=461, Expect=8e-153]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=4e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=447, Expect=2e-148]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=306, Expect=3e-94]} {RNA1509_7833} {RNA1310_11209.1} {RNA815_3705} Mlig455_056925 {REF} {Length: 1071} {RNA1509_17129} {RNA1310_82520} {RNA815_46682}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_44065

713

14.85

Mlig455_023161

Neo: -

Age: Up-Down-Down

SEC16A

1.000

MligTC455_45455

1171

24.39

Mlig455_028595, Mlig455_028612, Mlig455_028632, Mlig455_056925

Neo: Int S/G2/M

Age: -

BOP1

0.95

0.950

Mlig455_028595 {REF} {Length: 460} {NoTransDecoderORF} {RNA1509_17129} {RNA1310_82520} {RNA815_46682}

Mlig455_028612 {REF} {Length: 3936} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=319.2]; WD domain, G-beta repeat [PF00400.34, score=46.6]} {Human: ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=471, Expect=2e-156]; ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=471, Expect=2e-156]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=461, Expect=8e-153]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=4e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=447, Expect=2e-148]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=306, Expect=6e-94]} {RNA1509_7833} {RNA1310_11209.1, RNA1509_7833} {RNA1509_7833, RNA815_3705}

Mlig455_028632 {REF} {Length: 3135} {TRANSSPLICED} {Pfam: BOP1NT (NUC169) domain [PF08145.14, score=318.7]; WD domain, G-beta repeat [PF00400.34, score=46.6]} {Human: ENSG00000261236, BOP1, block of proliferation 1, [RH, Score=472, Expect=1e-156]; ENSG00000285301, BOP1, block of proliferation 1, [RH, Score=472, Expect=1e-156]} {Mouse: ENSMUSG00000022557, Bop1, block of proliferation 1, [RH, Score=461, Expect=8e-153]} {Dmel: FBgn0028744, CG5033, [RH, Score=468, Expect=4e-155]} {Celegans: WBGene00012978, Y48B6A.1, Ribosome biogenesis protein BOP1 homolog, [RH, Score=447, Expect=2e-148]} {Smed: dd_Smed_v6_11041_0_1, dd_Smed_v6_11041_0_1, [RH, Score=306, Expect=3e-94]} {RNA1509_7833} {RNA1310_11209.1} {RNA815_3705}

Mlig455_056925 {REF} {Length: 1071} {RNA1509_17129} {RNA1310_82520} {RNA815_46682}