TomoSeq data search

Data search

Results for MligTC455_44087

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44087

7829

163.10

Mlig455_021298

Neo: -

Age: logFC(26M/2M)=0.251

Region-enriched R5: 1.085/0.00001

RPS23

Mlig455_021298 {REF} {Length: 564} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=9e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=6e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=6e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=1e-90]} {RNA1509_12587, RNA1509_24084, RNA1509_4467, RNA1509_45815} {RNA1310_37683.4, RNA1509_12587, RNA1509_24084, RNA1509_4467, RNA1509_45815} {RNA1509_12587, RNA1509_24084, RNA1509_4467, RNA1509_45815, RNA815_31446}

Cumulative graph for MligTC455_44087

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.857	7.46	0.03305	0.45969
RegionR2	-0.895	7.46	0.00092	0.02059
RegionR3	0.348	7.46	0.11034	0.57808
RegionR4	0.903	7.46	0.00021	0.00299
RegionR5	1.085	7.46	0.00000	0.00001
RegionR6	0.224	7.46	0.31292	0.90200
RegionR7	-0.047	7.46	0.84269	1.00000
RegionR8	-0.762	7.46	0.00831	0.16950

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.187	7.46	0.04393	0.67799
RegenerationR2	0.21	7.46	0.43952	0.83992
RegenerationR3	-0.099	7.46	0.72005	0.95420
RegenerationR4	0.069	7.46	0.80746	0.98872
RegenerationR5	-0.172	7.46	0.52756	0.87335
RegenerationR6	0.131	7.46	0.63840	0.89211
RegenerationBL	-0.035	7.46	0.89238	1.00000
RegenerationTP	0.275	7.46	0.32694	0.77163

Genes with expression patterns similar to MligTC455_44087

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44087	7829	163.1	Mlig455_021298	Neo: - Age: logFC(26M/2M)=0.251 Region-enriched R5: 1.085/0.00001	RPS23	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021298 {REF} {Length: 564} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=9e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=6e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=6e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=1e-90]} {RNA1509_12587, RNA1509_24084, RNA1509_4467, RNA1509_45815} {RNA1310_37683.4, RNA1509_12587, RNA1509_24084, RNA1509_4467, RNA1509_45815} {RNA1509_12587, RNA1509_24084, RNA1509_4467, RNA1509_45815, RNA815_31446}
2.	MligTC455_44088	7729	161.01	Mlig455_021569	Neo: - Age: Down-Down-Up Region-enriched R5: 1.103/0.00001	RPS23	5.912	0.993	1.000	0.925	0.999	0.997	0.998	Mlig455_021569 {REF} {Length: 564} {TRANSSPLICED} {Pfam: Ribosomal protein S12/S23 [PF00164.27, score=173.9]} {Human: ENSG00000186468, RPS23, ribosomal protein S23, [RH, Score=256, Expect=9e-89]} {Mouse: ENSMUSG00000049517, Rps23, ribosomal protein S23, [RH, Score=256, Expect=6e-89]} {Dmel: FBgn0033912, RpS23, Ribosomal protein S23, [RH, Score=257, Expect=1e-89]} {Celegans: WBGene00004492, rps-23, 40S ribosomal protein S23, [RH, Score=260, Expect=6e-91]} {Smed: dd_Smed_v6_290_0_1, dd_Smed_v6_290_0_1, [RH, Score=259, Expect=1e-90]} {RNA1509_12252} {RNA1310_37683.4, RNA1509_12252} {RNA1509_12252, RNA815_31446}
3.	MligTC455_53560	7500	156.25	Mlig455_006919, Mlig455_017935	Neo: Int S/G2/M Age: Down-Up-Up Region-enriched R4: 1.200/0.00022	TIMM8A	2.552	0.750	0.840	-	0.962	-	-	Mlig455_006919 {REF} {Length: 563} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=64.9]} {Human: ENSG00000126953, TIMM8A, translocase of inner mitochondrial membrane 8A, [RH, Score=52.4, Expect=2e-09]} {Mouse: ENSMUSG00000048007, Timm8a1, translocase of inner mitochondrial membrane 8A1, [RH, Score=52.4, Expect=1e-09]; ENSMUSG00000071229, Timm8a2, translocase of inner mitochondrial membrane 8A2, [RH, Score=52.0, Expect=2e-09]} {RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677} {RNA1310_36867, RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677} {RNA1509_10787, RNA1509_20811, RNA1509_24476, RNA1509_46601, RNA1509_57054, RNA1509_7677, RNA815_30004} Mlig455_017935 {REF} {Length: 497} {TRANSSPLICED} {Pfam: Tim10/DDP family zinc finger [PF02953.17, score=58.7]} {Human: ENSG00000126953, TIMM8A, translocase of inner mitochondrial membrane 8A, [Score=48.5, Expect=4e-08]} {Mouse: ENSMUSG00000071229, Timm8a2, translocase of inner mitochondrial membrane 8A2, [Score=48.5, Expect=3e-08]; ENSMUSG00000048007, Timm8a1, translocase of inner mitochondrial membrane 8A1, [Score=48.5, Expect=3e-08]} {RNA1509_57054} {RNA1310_61445} {RNA815_30004}
4.	MligTC455_22472	1921	40.02	Mlig455_001851, Mlig455_001923	Neo: - Age: logFC(26M/2M)=0.300 Region-enriched R5: 1.841/0.00024 Region-enriched R4: 1.791/0.00726 Region-enriched R3: 1.705/0.00436	DHRS1	1.719	-	-	-	0.747	0.972	-	Mlig455_001851 {REF} {Length: 2936} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=117.0]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=99.8]; KR domain [PF08659.12, score=29.0]} {Human: ENSG00000284868, DHRS1, dehydrogenase/reductase 1, [RH, Score=295, Expect=4e-99]; ENSG00000157379, DHRS1, dehydrogenase/reductase 1, [RH, Score=295, Expect=4e-99]} {Mouse: ENSMUSG00000002332, Dhrs1, dehydrogenase/reductase (SDR family) member 1, [RH, Score=300, Expect=3e-101]} {Dmel: FBgn0039537, CG5590, [Score=84.7, Expect=4e-18]} {Celegans: WBGene00000973, dhs-9, DeHydrogenases, Short chain, [RH, Score=316, Expect=1e-107]} {Smed: dd_Smed_v6_956_0_1, dd_Smed_v6_956_0_1, [Score=89.0, Expect=8e-20]} {RNA1509_48116} {RNA1310_19863} {RNA815_7780} Mlig455_001923 {REF} {Length: 3749} {TRANSSPLICED} {Pfam: short chain dehydrogenase [PF00106.27, score=233.4]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=189.0]; KR domain [PF08659.12, score=47.9]; Diiron non-heme beta-hydroxylase N-terminal domain [PF18456.3, score=19.2]} {Human: ENSG00000157379, DHRS1, dehydrogenase/reductase 1, [RH, Score=291, Expect=2e-93]; ENSG00000284868, DHRS1, dehydrogenase/reductase 1, [RH, Score=291, Expect=2e-93]} {Mouse: ENSMUSG00000002332, Dhrs1, dehydrogenase/reductase (SDR family) member 1, [RH, Score=296, Expect=1e-95]} {Dmel: FBgn0037354, CG12171, [Score=88.6, Expect=2e-19]} {Celegans: WBGene00000973, dhs-9, DeHydrogenases, Short chain, [RH, Score=313, Expect=2e-102]} {Smed: dd_Smed_v6_956_0_1, dd_Smed_v6_956_0_1, [Score=86.7, Expect=4e-18]} {RNA1509_48116} {RNA1310_19863} {RNA815_7780}
5.	MligTC455_47917	1402	29.2	Mlig455_039834	Neo: - Age: -	DNAJB2	0.964	-	-	-	0.964	-	-	Mlig455_039834 {REF} {Length: 4553} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=96.9]} {Human: ENSG00000135924, DNAJB2, DnaJ heat shock protein family (Hsp40) member B2, [Score=122, Expect=3e-32]; ENSG00000179407, DNAJB8, DnaJ heat shock protein family (Hsp40) member B8, [Score=116, Expect=9e-31]} {Mouse: ENSMUSG00000081984, Dnajb3, DnaJ heat shock protein family (Hsp40) member B3, [Score=117, Expect=3e-31]; ENSMUSG00000026203, Dnajb2, DnaJ heat shock protein family (Hsp40) member B2, [Score=116, Expect=5e-30]; ENSMUSG00000029131, Dnajb6, DnaJ heat shock protein family (Hsp40) member B6, [Score=113, Expect=1e-29]; ENSMUSG00000048206, Dnajb8, DnaJ heat shock protein family (Hsp40) member B8, [Score=113, Expect=7e-30]} {Dmel: FBgn0034091, mrj, [Score=146, Expect=2e-42]} {Celegans: WBGene00001031, dnj-13, DNaJ domain (Prokaryotic heat shock protein), [Score=89.7, Expect=2e-20]} {Smed: dd_Smed_v6_2706_0_1, dd_Smed_v6_2706_0_1, [Score=161, Expect=2e-48]} {RNA1509_27790, RNA1509_45253, RNA1509_45510, RNA1509_4710, RNA1509_4874, RNA1509_8474} {RNA1310_28593, RNA1509_27790, RNA1509_45253, RNA1509_45510, RNA1509_4710, RNA1509_4874, RNA1509_8474} {RNA1509_27790, RNA1509_45253, RNA1509_45510, RNA1509_4710, RNA1509_4874, RNA1509_8474, RNA815_3659}
6.	MligTC455_29330	754	15.72	Mlig455_048535	Neo: - Age: -	GALM	0.95	-	-	-	0.950	-	-	Mlig455_048535 {REF} {Length: 2861} {TRANSSPLICED} {Pfam: Aldose 1-epimerase [PF01263.22, score=253.5]} {Human: ENSG00000143891, GALM, galactose mutarotase, [RH, Score=211, Expect=2e-65]} {Mouse: ENSMUSG00000035473, Galm, galactose mutarotase, [RH, Score=219, Expect=2e-68]} {Dmel: FBgn0035679, CG10467, [RH, Score=204, Expect=1e-62]} {Celegans: WBGene00015270, C01B4.6, Aldose 1-epimerase, [RH, Score=165, Expect=3e-48]} {Smed: dd_Smed_v6_1947_0_1, dd_Smed_v6_1947_0_1, [RH, Score=230, Expect=3e-73]} {RNA1509_4752} {RNA1310_11054.1} {RNA815_7761}
7.	MligTC455_35830	581	12.1	Mlig455_042761	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.338	MAPKAPK2	0.95	-	-	-	0.950	-	-	Mlig455_042761 {REF} {Length: 2863} {Pfam: Protein kinase domain [PF00069.27, score=208.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=92.3]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.6]; Kinase-like [PF14531.8, score=20.7]} {Human: ENSG00000162889, MAPKAPK2, mitogen-activated protein kinase-activated protein kinase 2, [Score=441, Expect=3e-155]; ENSG00000114738, MAPKAPK3, mitogen-activated protein kinase-activated protein kinase 3, [Score=426, Expect=1e-149]} {Mouse: ENSMUSG00000016528, Mapkapk2, MAP kinase-activated protein kinase 2, [Score=441, Expect=2e-155]; ENSMUSG00000032577, Mapkapk3, mitogen-activated protein kinase-activated protein kinase 3, [Score=428, Expect=2e-150]} {Dmel: FBgn0013987, MAPk-Ak2, MAP kinase activated protein-kinase-2, [Score=418, Expect=5e-147]} {Celegans: WBGene00007007, mak-2, MAP kinase-activated protein kinase mak-2, [Score=385, Expect=5e-134]} {Smed: dd_Smed_v6_12176_0_2, dd_Smed_v6_12176_0_2, [Score=426, Expect=1e-150]} {RNA1509_9679} {RNA1310_46134} {RNA815_6588}

Berezikov Lab - 2020-2021 © ERIBA