Data search


search
Exact
Search

Results for MligTC455_44153

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44153 80 1.67 Mlig455_016994, Mlig455_031918, Mlig455_031919

Neo: -

Age: -

NCAPH

Mlig455_016994 {REF} {Length: 3307} {Pfam: Condensin complex subunit 2 [PF05786.16, score=231.0]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=102, Expect=3e-22]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=111, Expect=5e-25]} {Dmel: FBgn0014127, barr, barren, [RH, Score=60.5, Expect=4e-09]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=117, Expect=4e-27]} {RNA1509_26831} {RNA1310_10201} {RNA815_13098}

Mlig455_031918 {REF} {Length: 868} {NoTransDecoderORF} {RNA1509_26831} {RNA1310_10201} {RNA815_50877}

Mlig455_031919 {REF} {Length: 3025} {Pfam: Condensin complex subunit 2 [PF05786.16, score=36.7]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=47.0, Expect=8e-06]} {RNA1509_26831} {RNA1310_10201} {RNA815_13098}

Cumulative graph for MligTC455_44153

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.855 1.861 0.63313 1.00000
RegionR2 0.153 1.861 0.82980 1.00000
RegionR3 -0.145 1.861 0.90721 1.00000
RegionR4 1.546 1.861 0.24384 0.54178
RegionR5 0.118 1.861 0.82191 1.00000
RegionR6 -0.408 1.861 0.95133 1.00000
RegionR7 0.083 1.861 0.85710 1.00000
RegionR8 1.508 1.861 0.29040 0.91844

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.374 1.861 0.99991 1.00000
RegenerationR2 -0.179 1.861 0.83149 0.99844
RegenerationR3 0.062 1.861 0.95774 1.00000
RegenerationR4 -0.76 1.861 0.43081 0.83080
RegenerationR5 -0.07 1.861 0.92424 1.00000
RegenerationR6 -0.628 1.861 0.54653 0.83693
RegenerationBL 0.22 1.861 0.85605 1.00000
RegenerationTP -5.587 1.861 0.01277 0.19219


Genes with expression patterns similar to MligTC455_44153

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44153 80 1.67 Mlig455_016994, Mlig455_031918, Mlig455_031919

Neo: -

Age: -

NCAPH 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_016994 {REF} {Length: 3307} {Pfam: Condensin complex subunit 2 [PF05786.16, score=231.0]} {Human: ENSG00000121152, NCAPH, non-SMC condensin I complex subunit H, [Score=102, Expect=3e-22]} {Mouse: ENSMUSG00000034906, Ncaph, non-SMC condensin I complex, subunit H, [Score=111, Expect=5e-25]} {Dmel: FBgn0014127, barr, barren, [RH, Score=60.5, Expect=4e-09]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=117, Expect=4e-27]} {RNA1509_26831} {RNA1310_10201} {RNA815_13098}

Mlig455_031918 {REF} {Length: 868} {NoTransDecoderORF} {RNA1509_26831} {RNA1310_10201} {RNA815_50877}

Mlig455_031919 {REF} {Length: 3025} {Pfam: Condensin complex subunit 2 [PF05786.16, score=36.7]} {Smed: dd_Smed_v6_8491_0_3, dd_Smed_v6_8491_0_3, [Score=47.0, Expect=8e-06]} {RNA1509_26831} {RNA1310_10201} {RNA815_13098}
2. MligTC455_05686 18 0.38 Mlig455_040578, Mlig455_040661

Neo: -

Age: -

FCN2 1.685 - - - 0.953 0.732 -

Mlig455_040578 {REF} {Length: 1086} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=151.0]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=136, Expect=6e-38]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=129, Expect=1e-33]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=127, Expect=2e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=125, Expect=2e-32]; ENSMUSG00000026938, Fcna, ficolin A, [Score=124, Expect=6e-33]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=123, Expect=9e-32]} {Dmel: FBgn0034160, CG5550, [Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=54.7, Expect=1e-09]} {RNA1509_26827} {RNA1310_33619.1} {RNA815_17173.3}

Mlig455_040661 {REF} {Length: 1086} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=151.0]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=136, Expect=6e-38]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=129, Expect=1e-33]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=127, Expect=2e-34]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=125, Expect=2e-32]; ENSMUSG00000026938, Fcna, ficolin A, [Score=124, Expect=6e-33]; ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [Score=123, Expect=9e-32]} {Dmel: FBgn0034160, CG5550, [Score=110, Expect=1e-28]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=54.7, Expect=1e-09]} {RNA1509_26827} {RNA1310_33619.1} {RNA815_17173.3}
3. MligTC455_21758 11 0.22 Mlig455_057866

Neo: -

Age: -

0.981 - - - 0.981 - - Mlig455_057866 {REF} {Length: 1404} {RNA1509_2515} {RNA1310_23566} {RNA815_9263}
4. MligTC455_43954 180 3.75 Mlig455_052583, Mlig455_052596

Neo: Irradiation

Age: -

0.98 - - - - - 0.980

Mlig455_052583 {REF} {Length: 2001} {TRANSSPLICED} {RNA1509_34415} {RNA1310_26609.1, RNA1509_34415} {RNA1509_34415, RNA815_19301}

Mlig455_052596 {REF} {Length: 2140} {TRANSSPLICED} {RNA1509_34415, RNA1509_57175} {RNA1310_25763, RNA1509_57175} {RNA1509_57175, RNA815_19301}
5. MligTC455_25843 24 0.5 Mlig455_009826, Mlig455_010929, Mlig455_012780, Mlig455_027818, Mlig455_029748, Mlig455_030019, Mlig455_041784, Mlig455_047507, Mlig455_050518

Neo: -

Age: Up-Down-Down

GVQW3, SETMAR 0.974 - - - 0.974 - -

Mlig455_009826 {REF} {Length: 1473} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=51.4]; HTH domain in Mos1 transposase [PF17906.3, score=31.5]; Homeodomain-like domain [PF13565.8, score=30.0]; DDE superfamily endonuclease [PF13358.8, score=27.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=184, Expect=8e-53]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=89.7, Expect=3e-21]} {RNA1509_52649} {RNA1310_5245.1, RNA1509_52649} {RNA1509_52649, RNA815_6918}

Mlig455_010929 {REF} {Length: 1612} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=51.4]; HTH domain in Mos1 transposase [PF17906.3, score=31.5]; Homeodomain-like domain [PF13565.8, score=29.4]; DDE superfamily endonuclease [PF13358.8, score=27.5]; Winged helix-turn-helix DNA-binding [PF13412.8, score=19.3]; Helix-turn-helix domain [PF13518.8, score=19.1]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=185, Expect=3e-53]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=90.1, Expect=2e-21]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}

Mlig455_012780 {REF} {Length: 1784} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=51.4]; HTH domain in Mos1 transposase [PF17906.3, score=31.5]; Homeodomain-like domain [PF13565.8, score=30.0]; DDE superfamily endonuclease [PF13358.8, score=27.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=185, Expect=3e-53]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=89.7, Expect=3e-21]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}

Mlig455_027818 {REF} {Length: 1333} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=50.5]; HTH domain in Mos1 transposase [PF17906.3, score=31.5]; Homeodomain-like domain [PF13565.8, score=30.0]; DDE superfamily endonuclease [PF13358.8, score=27.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=184, Expect=8e-53]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=89.4, Expect=6e-21]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}

Mlig455_029748 {REF} {Length: 1757} {TRANSSPLICED} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=51.7]; Homeodomain-like domain [PF13565.8, score=30.3]; HTH domain in Mos1 transposase [PF17906.3, score=25.8]; Helix-turn-helix domain [PF13518.8, score=19.0]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=102, Expect=2e-24]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [Score=79.0, Expect=5e-18]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}

Mlig455_030019 {REF} {Length: 2305} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=51.4]; HTH domain in Mos1 transposase [PF17906.3, score=31.5]; Homeodomain-like domain [PF13565.8, score=30.0]; DDE superfamily endonuclease [PF13358.8, score=27.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=184, Expect=8e-53]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=89.7, Expect=3e-21]} {RNA1509_33257, RNA1509_52649} {RNA1310_5245.1, RNA1509_33257} {RNA1509_33257, RNA815_6918}

Mlig455_041784 {REF} {Length: 1260} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=33.4]; Homeodomain-like domain [PF13565.8, score=21.8]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=45.1, Expect=2e-06]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [Score=55.8, Expect=4e-11]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}

Mlig455_047507 {REF} {Length: 1513} {Pfam: HTH domain in Mos1 transposase [PF17906.3, score=33.4]; Homeodomain-like domain [PF13565.8, score=31.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=19.3]; Helix-turn-helix domain [PF13518.8, score=18.9]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=84.0, Expect=6e-19]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [Score=66.2, Expect=4e-14]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}

Mlig455_050518 {REF} {Length: 1809} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=51.4]; HTH domain in Mos1 transposase [PF17906.3, score=31.5]; Homeodomain-like domain [PF13565.8, score=30.0]; DDE superfamily endonuclease [PF13358.8, score=27.5]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=184, Expect=8e-53]} {Smed: dd_Smed_v6_1612_0_1, dd_Smed_v6_1612_0_1, [RH, Score=89.7, Expect=3e-21]} {RNA1509_52649} {RNA1310_5245.1} {RNA815_6918}
6. MligTC455_11174 35 0.73 Mlig455_044360

Neo: -

Age: -

ARFIP2 0.971 - - - - - 0.971 Mlig455_044360 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: Arfaptin-like domain [PF06456.15, score=205.5]} {Human: ENSG00000132254, ARFIP2, ADP ribosylation factor interacting protein 2, [RH, Score=270, Expect=3e-88]; ENSG00000164144, ARFIP1, ADP ribosylation factor interacting protein 1, [RH, Score=268, Expect=5e-87]} {Mouse: ENSMUSG00000030881, Arfip2, ADP-ribosylation factor interacting protein 2, [RH, Score=269, Expect=5e-88]; ENSMUSG00000074513, Arfip1, ADP-ribosylation factor interacting protein 1, [RH, Score=265, Expect=6e-86]; ENSMUSG00000102805, Gm37240, predicted gene, 37240, [RH, Score=262, Expect=1e-86]} {Dmel: FBgn0037884, Arfip, Arfaptin, [RH, Score=262, Expect=3e-85]} {Celegans: WBGene00010040, F54C8.7, [RH, Score=137, Expect=6e-38]} {Smed: dd_Smed_v6_5732_0_1, dd_Smed_v6_5732_0_1, [RH, Score=234, Expect=2e-75]} {RNA1509_22952} {RNA1310_13386} {RNA815_7638}
7. MligTC455_18503 17 0.36 Mlig455_007178

Neo: -

Age: -

0.964 - - - - - 0.964 Mlig455_007178 {REF} {Length: 414} {NoTransDecoderORF} {RNA1310_86515}
8. MligTC455_21779 274 5.71 Mlig455_027616

Neo: -

Age: Down-Up-Up

0.957 - - - 0.957 - - Mlig455_027616 {REF} {Length: 1003} {Pfam: WSC domain [PF01822.21, score=44.2]; PAN domain [PF00024.28, score=18.6]} {RNA1310_34968.1} {RNA815_9084.1}
9. MligTC455_42413 82 1.7 Mlig455_010342

Neo: -

Age: -

0.955 - - - 0.955 - - Mlig455_010342 {REF} {Length: 3709} {RNA1509_29028} {RNA1310_28194.1} {RNA815_10475.1}
10. MligTC455_31301 256 5.34 Mlig455_016506

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 2.171/0.00592

0.952 - - - - - 0.952 Mlig455_016506 {REF} {Length: 2610} {TRANSSPLICED} {RNA1509_45336, RNA1509_46269, RNA1509_50988} {RNA1310_30214, RNA1509_45336, RNA1509_50988} {RNA1509_45336, RNA1509_50988, RNA815_15422}
11. MligTC455_34330 50 1.03 Mlig455_025815

Neo: -

Age: Down-Up-Down

FAIM 0.95 - - - 0.950 - - Mlig455_025815 {REF} {Length: 1108} {TRANSSPLICED} {Pfam: Fas apoptotic inhibitory molecule (FAIM1) [PF06905.15, score=227.6]} {Human: ENSG00000158234, FAIM, Fas apoptotic inhibitory molecule, [Score=190, Expect=2e-61]} {Mouse: ENSMUSG00000032463, Faim, Fas apoptotic inhibitory molecule, [Score=187, Expect=1e-60]} {Dmel: FBgn0033985, CG10257, [Score=128, Expect=7e-37]} {Celegans: WBGene00016633, C44B11.1, [Score=165, Expect=8e-52]} {Smed: dd_Smed_v6_9854_0_1, dd_Smed_v6_9854_0_1, [RH, Score=179, Expect=1e-57]} {RNA1509_59589} {RNA1310_30778} {RNA815_14130.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA