TomoSeq data search

Data search

Results for MligTC455_44190

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44190

1050

21.88

Mlig455_021337

Neo: -

Age: logFC(26M/2M)=0.277

Region-enriched R3: 2.667/0.00001
Region-enriched R4: 2.615/0.00069

SORD

Mlig455_021337 {REF} {Length: 1806} {TRANSSPLICED} {Pfam: Alcohol dehydrogenase GroES-like domain [PF08240.14, score=101.7]; Zinc-binding dehydrogenase [PF00107.28, score=91.5]; Glucose dehydrogenase C-terminus [PF16912.7, score=45.5]; Zinc-binding dehydrogenase [PF13602.8, score=25.9]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=20.7]} {Human: ENSG00000140263, SORD, sorbitol dehydrogenase, [RH, Score=407, Expect=4e-142]} {Mouse: ENSMUSG00000027227, Sord, sorbitol dehydrogenase, [RH, Score=418, Expect=2e-146]} {Dmel: FBgn0022359, Sodh-2, Sorbitol dehydrogenase-2, [RH, Score=409, Expect=4e-143]} {Celegans: WBGene00011003, R04B5.5, [RH, Score=413, Expect=6e-145]} {Smed: dd_Smed_v6_1002_0_1, dd_Smed_v6_1002_0_1, [RH, Score=385, Expect=1e-133]} {RNA1509_26785} {RNA1310_12177.1, RNA1509_26785} {RNA1509_26785, RNA815_13817.1}

Cumulative graph for MligTC455_44190

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-6.474	4.747	0.07736	0.61227
RegionR2	-0.448	4.747	0.94777	1.00000
RegionR3	2.667	4.747	0.00000	0.00001
RegionR4	2.615	4.747	0.00004	0.00069
RegionR5	1.3	4.747	0.04761	0.18109
RegionR6	1.069	4.747	0.15606	0.70454
RegionR7	0.322	4.747	0.70456	1.00000
RegionR8	-1.05	4.747	0.98832	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.895	4.747	0.07285	0.75938
RegenerationR2	0.752	4.747	0.10019	0.50101
RegenerationR3	-0.111	4.747	0.79270	0.98000
RegenerationR4	-0.057	4.747	0.89769	1.00000
RegenerationR5	0.251	4.747	0.56681	0.89501
RegenerationR6	0.687	4.747	0.12312	0.43143
RegenerationBL	1.19	4.747	0.03112	0.19726
RegenerationTP	1.716	4.747	0.00886	0.15866

Genes with expression patterns similar to MligTC455_44190

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44190	1050	21.88	Mlig455_021337	Neo: - Age: logFC(26M/2M)=0.277 Region-enriched R3: 2.667/0.00001 Region-enriched R4: 2.615/0.00069	SORD	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_021337 {REF} {Length: 1806} {TRANSSPLICED} {Pfam: Alcohol dehydrogenase GroES-like domain [PF08240.14, score=101.7]; Zinc-binding dehydrogenase [PF00107.28, score=91.5]; Glucose dehydrogenase C-terminus [PF16912.7, score=45.5]; Zinc-binding dehydrogenase [PF13602.8, score=25.9]; Alanine dehydrogenase/PNT, C-terminal domain [PF01262.23, score=20.7]} {Human: ENSG00000140263, SORD, sorbitol dehydrogenase, [RH, Score=407, Expect=4e-142]} {Mouse: ENSMUSG00000027227, Sord, sorbitol dehydrogenase, [RH, Score=418, Expect=2e-146]} {Dmel: FBgn0022359, Sodh-2, Sorbitol dehydrogenase-2, [RH, Score=409, Expect=4e-143]} {Celegans: WBGene00011003, R04B5.5, [RH, Score=413, Expect=6e-145]} {Smed: dd_Smed_v6_1002_0_1, dd_Smed_v6_1002_0_1, [RH, Score=385, Expect=1e-133]} {RNA1509_26785} {RNA1310_12177.1, RNA1509_26785} {RNA1509_26785, RNA815_13817.1}
2.	MligTC455_12954	637	13.27	Mlig455_008009	Neo: - Age: Down-Down-Up, logFC(26M/2M)=0.547 Region-enriched R3: 1.755/0.00048	ENPP1	3.336	0.747	0.868	-	-	0.759	0.962	Mlig455_008009 {REF} {Length: 1580} {Pfam: Type I phosphodiesterase / nucleotide pyrophosphatase [PF01663.24, score=280.2]; Sulfatase [PF00884.25, score=23.7]} {Human: ENSG00000197594, ENPP1, ectonucleotide pyrophosphatase/phosphodiesterase 1, [RH, Score=284, Expect=2e-86]; ENSG00000001561, ENPP4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [RH, Score=282, Expect=3e-90]} {Mouse: ENSMUSG00000023961, Enpp4, ectonucleotide pyrophosphatase/phosphodiesterase 4, [RH, Score=282, Expect=2e-90]; ENSMUSG00000023960, Enpp5, ectonucleotide pyrophosphatase/phosphodiesterase 5, [RH, Score=276, Expect=6e-88]; ENSMUSG00000037370, Enpp1, ectonucleotide pyrophosphatase/phosphodiesterase 1, [RH, Score=270, Expect=1e-81]} {Celegans: WBGene00007755, C27A7.3, Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.3, [RH, Score=166, Expect=9e-45]} {Smed: dd_Smed_v6_9016_0_1, dd_Smed_v6_9016_0_1, [RH, Score=223, Expect=2e-67]} {RNA1509_40246, RNA1509_40829, RNA1509_4220, RNA1509_47985} {RNA1310_25457, RNA1509_40246, RNA1509_40829, RNA1509_47985} {RNA1509_40246, RNA1509_40829, RNA1509_47985, RNA815_4584.2}
3.	MligTC455_34409	4786	99.71	Mlig455_051480	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.974 Region-specific R3: 4.094 Region-enriched R3: 3.637/0.00000 Region-enriched R4: 1.849/0.00051 Region-enriched R5: 1.030/0.03456 Regeneration-enriched R2: 2.672 Regeneration-enriched TP: 2.301		3.271	0.759	0.955	-	-	0.767	0.790	Mlig455_051480 {REF} {Length: 1610} {Pfam: Ependymin [PF00811.20, score=69.8]} {RNA1509_1990} {RNA1310_23428.1, RNA1509_1990} {RNA1509_1990, RNA815_9917}
4.	MligTC455_48499	387	8.06	Mlig455_021142	Neo: - Age: Down-Up-Up Region-enriched R3: 2.440/0.00098	MICU3	3.203	0.721	0.951	-	-	0.720	0.811	Mlig455_021142 {REF} {Length: 1497} {Pfam: EF-hand domain pair [PF13499.8, score=35.3]; EF-hand domain [PF13405.8, score=34.8]; EF-hand domain pair [PF13833.8, score=32.1]; EF hand [PF00036.34, score=31.2]; EF hand [PF13202.8, score=23.3]} {Human: ENSG00000155970, MICU3, mitochondrial calcium uptake family member 3, [Score=260, Expect=4e-83]} {Mouse: ENSMUSG00000021973, Micu2, mitochondrial calcium uptake 2, [Score=216, Expect=2e-65]; ENSMUSG00000039478, Micu3, mitochondrial calcium uptake family, member 3, [Score=214, Expect=8e-64]} {Dmel: FBgn0038735, CG4662, [Score=281, Expect=3e-90]} {Celegans: WBGene00008345, C56A3.6, [Score=241, Expect=1e-75]} {Smed: dd_Smed_v6_5430_0_1, dd_Smed_v6_5430_0_1, [Score=204, Expect=5e-61]} {RNA1509_14710} {RNA1310_3702} {RNA815_171.2}
5.	MligTC455_25615	516	10.76	Mlig455_025783	Neo: - Age: - Region-enriched R3: 3.585/0.00487 Regeneration-downregulated R3: -5.478 Regeneration-depleted R3: -5.478		1.789	0.956	0.833	-	-	-	-	Mlig455_025783 {REF} {Length: 1375} {NoTransDecoderORF} {RNA1509_24069} {RNA1310_114473} {RNA815_13375.1}

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