Data search
Results for MligTC455_44207
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44207 | 10625 | 221.35 | Mlig455_034338, Mlig455_043854, Mlig455_050089 | Neo: - Age: Down-Up-Up Region-enriched R2: 2.728/0.00938 |
Mlig455_034338 {REF} {Length: 707} {RNA1509_3491} {RNA1310_46443.1} {RNA815_27422} Mlig455_043854 {REF} {Length: 707} {RNA1509_3491} {RNA1310_46443.1} {RNA815_27422} Mlig455_050089 {REF} {Length: 707} {RNA1509_3491} {RNA1310_46443.1, RNA1509_3491} {RNA1509_3491, RNA815_27422} |
Cumulative graph for MligTC455_44207
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.58 | 7.846 | 0.10508 | 0.67981 | |
| RegionR2 | 2.728 | 7.846 | 0.00032 | 0.00938 | |
| RegionR3 | 1.023 | 7.846 | 0.12255 | 0.60452 | |
| RegionR4 | 1.998 | 7.846 | 0.01212 | 0.07048 | |
| RegionR5 | 2.079 | 7.846 | 0.00107 | 0.01074 | |
| RegionR6 | 0.005 | 7.846 | 0.99051 | 1.00000 | |
| RegionR7 | -4.379 | 7.846 | 0.00002 | 0.00144 | |
| RegionR8 | -1.874 | 7.846 | 0.04716 | 0.42582 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.527 | 7.846 | 0.13888 | 0.87575 | |
| RegenerationR2 | -3.136 | 7.846 | 0.00178 | 0.06523 | |
| RegenerationR3 | -0.145 | 7.846 | 0.87271 | 1.00000 | |
| RegenerationR4 | -1.483 | 7.846 | 0.13123 | 0.54760 | |
| RegenerationR5 | -1.146 | 7.846 | 0.21475 | 0.64972 | |
| RegenerationR6 | -0.398 | 7.846 | 0.67306 | 0.91017 | |
| RegenerationBL | -0.989 | 7.846 | 0.25756 | 0.61471 | |
| RegenerationTP | -0.094 | 7.846 | 0.92083 | 1.00000 |
Genes with expression patterns similar to MligTC455_44207
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44207 | 10625 | 221.35 | Mlig455_034338, Mlig455_043854, Mlig455_050089 | Neo: - Age: Down-Up-Up Region-enriched R2: 2.728/0.00938 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_034338 {REF} {Length: 707} {RNA1509_3491} {RNA1310_46443.1} {RNA815_27422} Mlig455_043854 {REF} {Length: 707} {RNA1509_3491} {RNA1310_46443.1} {RNA815_27422} Mlig455_050089 {REF} {Length: 707} {RNA1509_3491} {RNA1310_46443.1, RNA1509_3491} {RNA1509_3491, RNA815_27422} |
|
| 2. | MligTC455_44208 | 1187 | 24.73 | Mlig455_034393 | Neo: - Age: Down-Down-Up Region-enriched R4: 2.702/0.04491 |
5.664 | 0.986 | 0.973 | 0.963 | 0.858 | 0.897 | 0.987 | Mlig455_034393 {REF} {Length: 671} {RNA1509_3491} {RNA1310_46443.1} {RNA815_27422} | |
| 3. | MligTC455_13868 | 25 | 0.52 | Mlig455_055997 | Neo: - Age: - |
0.973 | - | - | - | - | - | 0.973 | Mlig455_055997 {REF} {Length: 604} {NoTransDecoderORF} {RNA1509_55733} {RNA1310_133414} | |
| 4. | MligTC455_43349 | 45 | 0.95 | Mlig455_025997, Mlig455_070422 | Neo: - Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_025997 {REF} {Length: 2086} {RNA1310_109338} Mlig455_070422 {REF} {Length: 2187} {RNA1310_109338} |
|
| 5. | MligTC455_53043 | 27 | 0.55 | Mlig455_066630 | Neo: - Age: Down-Down-Up |
NKX2-2 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_066630 {REF} {Length: 2054} {Pfam: Homeodomain [PF00046.31, score=68.4]} {Human: ENSG00000125820, NKX2-2, NK2 homeobox 2, [Score=128, Expect=3e-33]} {Mouse: ENSMUSG00000027434, Nkx2-2, NK2 homeobox 2, [Score=127, Expect=3e-33]} {Dmel: FBgn0261930, vnd, ventral nervous system defective, [RH, Score=121, Expect=3e-29]} {Celegans: WBGene00000447, ceh-24, Homeobox protein ceh-24, [Score=100, Expect=1e-23]} {Smed: dd_Smed_v6_2716_0_1, dd_Smed_v6_2716_0_1, [RH, Score=114, Expect=2e-27]} {RNA1310_17555} {RNA815_11836.1} |
Berezikov Lab - 2020-2021 © ERIBA