TomoSeq data search

Data search

Results for MligTC455_44268

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44268

23

0.47

Mlig455_016005

Neo: -

Age: -

Mlig455_016005 {REF} {Length: 1258} {NoTransDecoderORF} {RNA1310_67832}

Cumulative graph for MligTC455_44268

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.725	0.717	0.99991	1.00000
RegionR2	5.591	0.717	0.99979	1.00000
RegionR3	2.036	0.717	0.99984	1.00000
RegionR4	-3.671	0.717	0.99959	1.00000
RegionR5	0.549	0.717	0.99985	1.00000
RegionR6	1.974	0.717	0.99986	1.00000
RegionR7	1.312	0.717	0.99994	1.00000
RegionR8	-0.065	0.717	0.99991	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	6.829	0.717	0.99984	1.00000
RegenerationR2	0.214	0.717	0.38122	0.80218
RegenerationR3	6.382	0.717	0.00032	0.02415
RegenerationR4	3.782	0.717	0.01523	0.19316
RegenerationR5	3.637	0.717	0.00330	0.10148
RegenerationR6	4.65	0.717	0.00259	0.05806
RegenerationBL	3.886	0.717	0.02586	0.17711
RegenerationTP	5.718	0.717	0.00534	0.12237

Genes with expression patterns similar to MligTC455_44268

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44268	23	0.47	Mlig455_016005	Neo: - Age: -		2	-	-	-	-	1.000	1.000	Mlig455_016005 {REF} {Length: 1258} {NoTransDecoderORF} {RNA1310_67832}
2.	MligTC455_02011	14	0.3	Mlig455_026390	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_026390 {REF} {Length: 894} {NoTransDecoderORF} {RNA1310_46147} {RNA815_64157}
3.	MligTC455_45519	148	3.08	Mlig455_011435, Mlig455_061176	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_011435 {REF} {Length: 2322} {RNA1310_38993} {RNA815_43660} Mlig455_061176 {REF} {Length: 3147} {RNA1509_51062} {RNA1310_38993} {RNA815_43660}
4.	MligTC455_33423	15	0.32	Mlig455_049077	Neo: - Age: Up-Down-Down	ABCC1	0.959	-	-	-	-	-	0.959	Mlig455_049077 {REF} {Length: 4849} {Pfam: ABC transporter [PF00005.29, score=170.6]; ABC transporter transmembrane region [PF00664.25, score=46.7]; RecF/RecN/SMC N terminal domain [PF02463.21, score=44.4]; 50S ribosome-binding GTPase [PF01926.25, score=25.7]; RsgA GTPase [PF03193.18, score=21.5]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=19.3]; AAA domain [PF13401.8, score=19.0]; Protein of unknown function (DUF815) [PF05673.15, score=18.4]} {Human: ENSG00000278183, ABCC1, ATP binding cassette subfamily C member 1, [Score=430, Expect=8e-131]; ENSG00000103222, ABCC1, ATP binding cassette subfamily C member 1, [Score=430, Expect=8e-131]; ENSG00000108846, ABCC3, ATP binding cassette subfamily C member 3, [Score=421, Expect=2e-125]; ENSG00000023839, ABCC2, ATP binding cassette subfamily C member 2, [Score=419, Expect=2e-124]} {Mouse: ENSMUSG00000023088, Abcc1, ATP-binding cassette, sub-family C (CFTR/MRP), member 1, [Score=431, Expect=4e-129]; ENSMUSG00000020865, Abcc3, ATP-binding cassette, sub-family C (CFTR/MRP), member 3, [Score=427, Expect=5e-128]; ENSMUSG00000025194, Abcc2, ATP-binding cassette, sub-family C (CFTR/MRP), member 2, [Score=410, Expect=9e-122]} {Dmel: FBgn0032456, MRP, Multidrug-Resistance like Protein 1, [Score=424, Expect=9e-127]} {Celegans: WBGene00003408, mrp-2, Multidrug resistance related protein 2, [Score=395, Expect=1e-116]} {Smed: dd_Smed_v6_3982_0_1, dd_Smed_v6_3982_0_1, [Score=403, Expect=2e-119]} {RNA1509_17673} {RNA1310_13677} {RNA815_219}
5.	MligTC455_39649	137	2.85	Mlig455_009449	Neo: - Age: -	MAP4K3	0.959	-	-	-	-	0.959	-	Mlig455_009449 {REF} {Length: 5758} {Pfam: Protein kinase domain [PF00069.27, score=202.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=133.0]; CNH domain [PF00780.24, score=88.9]; ABC1 atypical kinase-like domain [PF03109.18, score=28.4]; Cobalamin biosynthesis protein CobT [PF06213.14, score=20.4]} {Human: ENSG00000011566, MAP4K3, mitogen-activated protein kinase kinase kinase kinase 3, [RH, Score=338, Expect=6e-101]; ENSG00000168067, MAP4K2, mitogen-activated protein kinase kinase kinase kinase 2, [RH, Score=329, Expect=4e-98]; ENSG00000282928, MAP4K1, mitogen-activated protein kinase kinase kinase kinase 1, [RH, Score=326, Expect=5e-97]; ENSG00000104814, MAP4K1, mitogen-activated protein kinase kinase kinase kinase 1, [RH, Score=326, Expect=5e-97]} {Mouse: ENSMUSG00000024242, Map4k3, mitogen-activated protein kinase kinase kinase kinase 3, [RH, Score=337, Expect=2e-100]; ENSMUSG00000106850, Map4k2, mitogen-activated protein kinase kinase kinase kinase 2, [RH, Score=330, Expect=9e-99]; ENSMUSG00000024948, Map4k2, mitogen-activated protein kinase kinase kinase kinase 2, [RH, Score=330, Expect=9e-99]; ENSMUSG00000037337, Map4k1, mitogen-activated protein kinase kinase kinase kinase 1, [RH, Score=324, Expect=3e-96]} {Dmel: FBgn0263395, hppy, happyhour, [RH, Score=319, Expect=6e-92]} {Celegans: WBGene00022603, gck-2, Mitogen-activated protein kinase kinase kinase kinase, [RH, Score=310, Expect=1e-91]} {Smed: dd_Smed_v6_9984_0_1, dd_Smed_v6_9984_0_1, [RH, Score=348, Expect=4e-112]} {RNA1509_10441, RNA1509_31584, RNA1509_42145} {RNA1310_3426.1, RNA1509_10441, RNA1509_31584, RNA1509_42145} {RNA1509_10441, RNA1509_31584, RNA1509_42145, RNA815_6005}
6.	MligTC455_56024	4	0.09	Mlig455_041715	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_041715 {REF} {Length: 135} {NoTransDecoderORF} {RNA815_65138}
7.	MligTC455_14761	47	0.99	Mlig455_059635	Neo: - Age: Down-Up-Down	RNF150	0.951	-	-	-	-	-	0.951	Mlig455_059635 {REF} {Length: 1851} {Pfam: Ring finger domain [PF13639.8, score=41.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=35.8]; RING-type zinc-finger [PF13445.8, score=32.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=31.6]; RING-H2 zinc finger domain [PF12678.9, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=30.2]; Prokaryotic RING finger family 4 [PF14447.8, score=27.0]; zinc-RING finger domain [PF14634.8, score=26.0]; RING-like zinc finger [PF17123.7, score=25.5]; Zinc-ribbon, C4HC2 type [PF17120.7, score=19.0]} {Human: ENSG00000170153, RNF150, ring finger protein 150, [Score=57.4, Expect=9e-09]; ENSG00000113269, RNF130, ring finger protein 130, [Score=57.4, Expect=1e-08]; ENSG00000159461, AMFR, autocrine motility factor receptor, [Score=55.5, Expect=3e-08]} {Mouse: ENSMUSG00000020376, Rnf130, ring finger protein 130, [Score=57.8, Expect=6e-09]; ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=55.8, Expect=3e-08]; ENSMUSG00000031751, Amfr, autocrine motility factor receptor, [Score=55.1, Expect=6e-08]} {Dmel: FBgn0034312, CG10916, [Score=58.2, Expect=2e-09]} {Celegans: WBGene00009164, hrdl-1, E3 ubiquitin-protein ligase hrd-like protein 1, [Score=52.0, Expect=4e-07]} {Smed: dd_Smed_v6_5532_0_1, dd_Smed_v6_5532_0_1, [Score=57.8, Expect=3e-09]} {RNA1509_44562} {RNA1310_19615.1} {RNA815_8630}
8.	MligTC455_34553	107	2.23	Mlig455_071087	Neo: - Age: Down-Up-Up, logFC(26M/2M)=-0.867	TNKS	0.951	-	-	-	-	-	0.951	Mlig455_071087 {REF} {Length: 3280} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=79.8]; Spectrin repeat [PF00435.23, score=35.4]} {Human: ENSG00000173273, TNKS, tankyrase, [Score=65.9, Expect=2e-10]; ENSG00000285372, AC270292.3, tankyrase, [Score=65.9, Expect=2e-10]; ENSG00000107854, TNKS2, tankyrase 2, [Score=64.3, Expect=6e-10]} {Mouse: ENSMUSG00000031529, Tnks, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase, [Score=65.5, Expect=2e-10]; ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=64.3, Expect=4e-10]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=68.6, Expect=2e-11]} {Smed: dd_Smed_v6_8547_0_1, dd_Smed_v6_8547_0_1, [Score=63.9, Expect=2e-10]} {RNA1509_42623} {RNA1310_17977} {RNA815_10323.1}

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