TomoSeq data search

Data search

Results for MligTC455_44396

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44396	3015	62.82	Mlig455_027791, Mlig455_063459	Neo: Neoblast Age: Up-Down-Up, logFC(26M/2M)=0.857 Region-enriched R4: 1.443/0.00822 Region-enriched R5: 1.328/0.00386	LSM5	Mlig455_027791 {REF} {Length: 492} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_5106} {RNA1310_50094.1} {RNA815_24740} Mlig455_063459 {REF} {Length: 492} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_5106} {RNA1310_50094.1, RNA1509_5106} {RNA1509_5106, RNA815_24740}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44396

3015

62.82

Mlig455_027791, Mlig455_063459

Neo: Neoblast

Age: Up-Down-Up, logFC(26M/2M)=0.857

Region-enriched R4: 1.443/0.00822
Region-enriched R5: 1.328/0.00386

LSM5

Mlig455_027791 {REF} {Length: 492} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_5106} {RNA1310_50094.1} {RNA815_24740}

Mlig455_063459 {REF} {Length: 492} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_5106} {RNA1310_50094.1, RNA1509_5106} {RNA1509_5106, RNA815_24740}

Cumulative graph for MligTC455_44396

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.682	6.138	0.33647	0.98269
RegionR2	-0.622	6.138	0.19380	0.55089
RegionR3	0.58	6.138	0.14185	0.64236
RegionR4	1.443	6.138	0.00074	0.00822
RegionR5	1.328	6.138	0.00029	0.00386
RegionR6	0.378	6.138	0.34707	0.93270
RegionR7	-0.162	6.138	0.69994	1.00000
RegionR8	-2.262	6.138	0.00012	0.00962

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.477	6.138	0.03422	0.64695
RegenerationR2	-0.512	6.138	0.30748	0.74779
RegenerationR3	-0.435	6.138	0.38772	0.79425
RegenerationR4	-0.202	6.138	0.69183	0.95034
RegenerationR5	-0.09	6.138	0.85300	1.00000
RegenerationR6	0.092	6.138	0.85724	1.00000
RegenerationBL	0.552	6.138	0.23878	0.59258
RegenerationTP	1.428	6.138	0.00633	0.13378

Genes with expression patterns similar to MligTC455_44396

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44396	3015	62.82	Mlig455_027791, Mlig455_063459	Neo: Neoblast Age: Up-Down-Up, logFC(26M/2M)=0.857 Region-enriched R4: 1.443/0.00822 Region-enriched R5: 1.328/0.00386	LSM5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_027791 {REF} {Length: 492} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_5106} {RNA1310_50094.1} {RNA815_24740} Mlig455_063459 {REF} {Length: 492} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=70.9]} {Human: ENSG00000106355, LSM5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Mouse: ENSMUSG00000091625, Lsm5, LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, [RH, Score=139, Expect=2e-44]} {Dmel: FBgn0035675, CG6610, [RH, Score=122, Expect=9e-38]} {Celegans: WBGene00003079, lsm-5, LSM Sm-like protein, [RH, Score=128, Expect=2e-40]} {Smed: dd_Smed_v6_606_1_1, dd_Smed_v6_606_1_1, [RH, Score=120, Expect=3e-37]} {RNA1509_5106} {RNA1310_50094.1, RNA1509_5106} {RNA1509_5106, RNA815_24740}
2.	MligTC455_46126	731	15.24	Mlig455_003869	Neo: Int S/G2/M Age: - Region-enriched R5: 1.409/0.00318	N6AMT1	2.72	-	0.867	-	-	0.959	0.894	Mlig455_003869 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Methyltransferase small domain [PF05175.16, score=18.4]} {Human: ENSG00000156239, N6AMT1, N-6 adenine-specific DNA methyltransferase 1, [RH, Score=132, Expect=8e-38]} {Mouse: ENSMUSG00000044442, N6amt1, N-6 adenine-specific DNA methyltransferase 1 (putative), [RH, Score=134, Expect=9e-39]} {Dmel: FBgn0031454, CG9960, [RH, Score=137, Expect=6e-40]} {Celegans: WBGene00016341, mtq-2, MethylTransferase modifying glutamine (Q), [RH, Score=98.2, Expect=5e-25]} {Smed: dd_Smed_v6_17664_0_1, dd_Smed_v6_17664_0_1, [RH, Score=64.7, Expect=2e-13]} {RNA1509_18833, RNA1509_27218} {RNA1310_46701, RNA1509_18833, RNA1509_27218} {RNA1509_18833, RNA1509_27218, RNA815_23131}
3.	MligTC455_30764	1181	24.6	Mlig455_046032	Neo: - Age: -		0.961	-	-	-	0.961	-	-	Mlig455_046032 {REF} {Length: 1106} {TRANSSPLICED} {RNA1509_1693} {RNA1310_29002} {RNA815_7853.1}
4.	MligTC455_47126	130	2.7	Mlig455_066263	Neo: - Age: -	AK5	0.955	-	-	-	-	0.955	-	Mlig455_066263 {REF} {Length: 2479} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=53.5]; AAA domain [PF13207.8, score=43.9]; AAA domain [PF13238.8, score=28.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=26.2]; AAA ATPase domain [PF13191.8, score=25.9]; AAA domain [PF13671.8, score=22.6]} {Human: ENSG00000154027, AK5, adenylate kinase 5, [Score=154, Expect=7e-40]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [Score=151, Expect=3e-39]} {Dmel: FBgn0032083, CG9541, [Score=86.7, Expect=1e-17]} {Celegans: WBGene00008746, F13E6.2, [RH, Score=139, Expect=1e-34]} {Smed: dd_Smed_v6_5119_0_1, dd_Smed_v6_5119_0_1, [Score=194, Expect=3e-53]} {RNA1509_15464, RNA1509_44174, RNA1509_8342} {RNA1310_8261.1, RNA1509_15464, RNA1509_44174, RNA1509_8342} {RNA1509_15464, RNA1509_44174, RNA1509_8342, RNA815_13379}
5.	MligTC455_24546	1132	23.59	Mlig455_006789	Neo: Germline Age: - Region-specific R5: 4.115 Region-enriched R5: 3.020/0.00000		0.951	-	-	-	0.951	-	-	Mlig455_006789 {REF} {Length: 5061} {Pfam: Antistasin family [PF02822.16, score=35.4]} {RNA1509_24809, RNA1509_29730, RNA1509_33068, RNA1509_4061, RNA1509_8397} {RNA1310_7513.1, RNA1509_24809, RNA1509_29730, RNA1509_33068, RNA1509_4061, RNA1509_8397} {RNA1509_24809, RNA1509_29730, RNA1509_33068, RNA1509_4061, RNA1509_8397, RNA815_3450.1}