Data search
Results for MligTC455_44407
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44407 | 260 | 5.42 | Mlig455_050536 | Neo: - Age: Up-Down-Up |
SUCLG2 | Mlig455_050536 {REF} {Length: 1827} {TRANSSPLICED} {Pfam: ATP-grasp domain [PF08442.12, score=139.3]} {Human: ENSG00000172340, SUCLG2, succinate-CoA ligase GDP-forming beta subunit, [Score=210, Expect=2e-65]} {Mouse: ENSMUSG00000061838, Suclg2, succinate-Coenzyme A ligase, GDP-forming, beta subunit, [Score=207, Expect=4e-65]} {Dmel: FBgn0029118, Sucb, [Score=150, Expect=5e-43]} {Celegans: WBGene00016844, sucg-1, Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial, [Score=173, Expect=6e-52]} {Smed: dd_Smed_v6_2947_0_1, dd_Smed_v6_2947_0_1, [Score=174, Expect=2e-52]} {RNA1509_991} {RNA1310_15897} {RNA815_6024} |
Cumulative graph for MligTC455_44407
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.279 | 2.778 | 0.90017 | 1.00000 | |
| RegionR2 | -1.141 | 2.778 | 0.16195 | 0.50384 | |
| RegionR3 | 0.017 | 2.778 | 0.96857 | 1.00000 | |
| RegionR4 | 1.738 | 2.778 | 0.01185 | 0.06933 | |
| RegionR5 | 1.003 | 2.778 | 0.06610 | 0.22873 | |
| RegionR6 | 0.275 | 2.778 | 0.67218 | 1.00000 | |
| RegionR7 | -0.482 | 2.778 | 0.65649 | 1.00000 | |
| RegionR8 | -1.688 | 2.778 | 0.30281 | 0.93405 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.328 | 2.778 | 0.21809 | 0.95419 | |
| RegenerationR2 | 0.639 | 2.778 | 0.25845 | 0.70496 | |
| RegenerationR3 | 0.755 | 2.778 | 0.19912 | 0.63375 | |
| RegenerationR4 | 0.617 | 2.778 | 0.26664 | 0.71396 | |
| RegenerationR5 | 0.93 | 2.778 | 0.05190 | 0.36681 | |
| RegenerationR6 | 0.651 | 2.778 | 0.28829 | 0.63841 | |
| RegenerationBL | 2.123 | 2.778 | 0.00722 | 0.08292 | |
| RegenerationTP | 0.388 | 2.778 | 0.75859 | 1.00000 |
Genes with expression patterns similar to MligTC455_44407
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44407 | 260 | 5.42 | Mlig455_050536 | Neo: - Age: Up-Down-Up |
SUCLG2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_050536 {REF} {Length: 1827} {TRANSSPLICED} {Pfam: ATP-grasp domain [PF08442.12, score=139.3]} {Human: ENSG00000172340, SUCLG2, succinate-CoA ligase GDP-forming beta subunit, [Score=210, Expect=2e-65]} {Mouse: ENSMUSG00000061838, Suclg2, succinate-Coenzyme A ligase, GDP-forming, beta subunit, [Score=207, Expect=4e-65]} {Dmel: FBgn0029118, Sucb, [Score=150, Expect=5e-43]} {Celegans: WBGene00016844, sucg-1, Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial, [Score=173, Expect=6e-52]} {Smed: dd_Smed_v6_2947_0_1, dd_Smed_v6_2947_0_1, [Score=174, Expect=2e-52]} {RNA1509_991} {RNA1310_15897} {RNA815_6024} |
| 2. | MligTC455_24559 | 550 | 11.45 | Mlig455_021389 | Neo: - Age: - |
1.749 | - | - | - | - | 0.953 | 0.796 | Mlig455_021389 {REF} {Length: 1617} {NoTransDecoderORF} {RNA1509_36722} {RNA1310_26276} {RNA815_12141} | |
| 3. | MligTC455_44192 | 1330 | 27.7 | Mlig455_069040 | Neo: - Age: - |
1.681 | - | - | - | - | 0.970 | 0.711 | Mlig455_069040 {REF} {Length: 4668} {RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892} {RNA1310_17993, RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892} {RNA1509_20113, RNA1509_23522, RNA1509_28261, RNA1509_59892, RNA815_30434.1} | |
| 4. | MligTC455_49493 | 514 | 10.71 | Mlig455_024144 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.638/0.01182 |
COX17 | 1.671 | 0.708 | - | - | - | 0.963 | - | Mlig455_024144 {REF} {Length: 1775} {TRANSSPLICED} {Pfam: Cytochrome C oxidase copper chaperone (COX17) [PF05051.15, score=73.6]} {Human: ENSG00000138495, COX17, cytochrome c oxidase copper chaperone COX17, [RH, Score=71.2, Expect=1e-17]} {Mouse: ENSMUSG00000046516, Cox17, cytochrome c oxidase assembly protein 17, copper chaperone, [RH, Score=69.7, Expect=3e-17]; ENSMUSG00000095464, Gm21987, predicted gene 21987, [RH, Score=69.7, Expect=3e-17]} {Dmel: FBgn0030610, CG9065, [RH, Score=63.9, Expect=7e-15]} {Celegans: WBGene00018240, cox-17, Cytochrome OXidase assembly protein, [RH, Score=67.8, Expect=7e-17]} {Smed: dd_Smed_v6_732_0_1, dd_Smed_v6_732_0_1, [RH, Score=66.6, Expect=2e-16]} {RNA1509_21851, RNA1509_28998, RNA1509_34104} {RNA1310_11448.1, RNA1509_28998, RNA1509_34104} {RNA1509_28998, RNA1509_34104, RNA815_34681} |
Berezikov Lab - 2020-2021 © ERIBA