TomoSeq data search

Data search

Results for MligTC455_44467

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44467	1395	29.06	Mlig455_034686, Mlig455_034735	Neo: Int S/G2/M Age: -	MTFMT	Mlig455_034686 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: Formyl transferase [PF00551.21, score=84.9]; Formyl transferase, C-terminal domain [PF02911.20, score=37.6]} {Human: ENSG00000103707, MTFMT, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=146, Expect=6e-40]} {Mouse: ENSMUSG00000059183, Mtfmt, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=139, Expect=1e-37]} {Dmel: FBgn0039836, CG1750, [RH, Score=137, Expect=3e-37]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [Score=62.8, Expect=1e-10]} {Smed: dd_Smed_v6_11642_0_1, dd_Smed_v6_11642_0_1, [RH, Score=130, Expect=1e-34]} {RNA1509_23982} {RNA1310_26935, RNA1509_23982} {RNA1509_23982, RNA815_4110} Mlig455_034735 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: Formyl transferase [PF00551.21, score=85.7]; Formyl transferase, C-terminal domain [PF02911.20, score=37.6]} {Human: ENSG00000103707, MTFMT, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=144, Expect=3e-39]} {Mouse: ENSMUSG00000059183, Mtfmt, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=138, Expect=3e-37]} {Dmel: FBgn0039836, CG1750, [RH, Score=137, Expect=3e-37]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [Score=63.5, Expect=8e-11]} {Smed: dd_Smed_v6_11642_0_1, dd_Smed_v6_11642_0_1, [RH, Score=130, Expect=2e-34]} {RNA1509_23982} {RNA1310_26935} {RNA815_4110}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44467

1395

29.06

Mlig455_034686, Mlig455_034735

Neo: Int S/G2/M

Age: -

MTFMT

Mlig455_034686 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: Formyl transferase [PF00551.21, score=84.9]; Formyl transferase, C-terminal domain [PF02911.20, score=37.6]} {Human: ENSG00000103707, MTFMT, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=146, Expect=6e-40]} {Mouse: ENSMUSG00000059183, Mtfmt, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=139, Expect=1e-37]} {Dmel: FBgn0039836, CG1750, [RH, Score=137, Expect=3e-37]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [Score=62.8, Expect=1e-10]} {Smed: dd_Smed_v6_11642_0_1, dd_Smed_v6_11642_0_1, [RH, Score=130, Expect=1e-34]} {RNA1509_23982} {RNA1310_26935, RNA1509_23982} {RNA1509_23982, RNA815_4110}

Mlig455_034735 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: Formyl transferase [PF00551.21, score=85.7]; Formyl transferase, C-terminal domain [PF02911.20, score=37.6]} {Human: ENSG00000103707, MTFMT, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=144, Expect=3e-39]} {Mouse: ENSMUSG00000059183, Mtfmt, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=138, Expect=3e-37]} {Dmel: FBgn0039836, CG1750, [RH, Score=137, Expect=3e-37]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [Score=63.5, Expect=8e-11]} {Smed: dd_Smed_v6_11642_0_1, dd_Smed_v6_11642_0_1, [RH, Score=130, Expect=2e-34]} {RNA1509_23982} {RNA1310_26935} {RNA815_4110}

Cumulative graph for MligTC455_44467

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.758	5.027	0.34886	0.99292
RegionR2	0.129	5.027	0.77818	1.00000
RegionR3	0.207	5.027	0.59800	1.00000
RegionR4	-0.173	5.027	0.68116	0.97524
RegionR5	0.606	5.027	0.07775	0.25670
RegionR6	0.046	5.027	0.90512	1.00000
RegionR7	0.662	5.027	0.10479	0.61595
RegionR8	-0.72	5.027	0.20508	0.80541

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-8.098	5.027	0.01544	0.52251
RegenerationR2	-0.212	5.027	0.63043	0.92737
RegenerationR3	0.271	5.027	0.54293	0.87944
RegenerationR4	0.549	5.027	0.24011	0.68878
RegenerationR5	-0.237	5.027	0.57795	0.89965
RegenerationR6	0.613	5.027	0.18415	0.51994
RegenerationBL	0.301	5.027	0.50862	0.87230
RegenerationTP	0.355	5.027	0.48530	0.89208

Genes with expression patterns similar to MligTC455_44467

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44467	1395	29.06	Mlig455_034686, Mlig455_034735	Neo: Int S/G2/M Age: -	MTFMT	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_034686 {REF} {Length: 1322} {TRANSSPLICED} {Pfam: Formyl transferase [PF00551.21, score=84.9]; Formyl transferase, C-terminal domain [PF02911.20, score=37.6]} {Human: ENSG00000103707, MTFMT, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=146, Expect=6e-40]} {Mouse: ENSMUSG00000059183, Mtfmt, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=139, Expect=1e-37]} {Dmel: FBgn0039836, CG1750, [RH, Score=137, Expect=3e-37]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [Score=62.8, Expect=1e-10]} {Smed: dd_Smed_v6_11642_0_1, dd_Smed_v6_11642_0_1, [RH, Score=130, Expect=1e-34]} {RNA1509_23982} {RNA1310_26935, RNA1509_23982} {RNA1509_23982, RNA815_4110} Mlig455_034735 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: Formyl transferase [PF00551.21, score=85.7]; Formyl transferase, C-terminal domain [PF02911.20, score=37.6]} {Human: ENSG00000103707, MTFMT, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=144, Expect=3e-39]} {Mouse: ENSMUSG00000059183, Mtfmt, mitochondrial methionyl-tRNA formyltransferase, [RH, Score=138, Expect=3e-37]} {Dmel: FBgn0039836, CG1750, [RH, Score=137, Expect=3e-37]} {Celegans: WBGene00000109, alh-3, 10-formyltetrahydrofolate dehydrogenase, [Score=63.5, Expect=8e-11]} {Smed: dd_Smed_v6_11642_0_1, dd_Smed_v6_11642_0_1, [RH, Score=130, Expect=2e-34]} {RNA1509_23982} {RNA1310_26935} {RNA815_4110}
2.	MligTC455_50114	392	8.17	Mlig455_023521	Neo: - Age: -		1.761	-	-	-	0.809	0.952	-	Mlig455_023521 {REF} {Length: 3056} {TRANSSPLICED} {Pfam: Putative zinc-finger of transcription factor IIIC complex [PF12660.9, score=25.4]} {RNA1509_14184} {RNA1310_4881} {RNA815_1728.1}
3.	MligTC455_34046	413	8.6	Mlig455_029039	Neo: - Age: - Region-enriched R5: 1.590/0.04505	SNX1	0.965	-	-	-	0.965	-	-	Mlig455_029039 {REF} {Length: 5164} {TRANSSPLICED} {Pfam: Vps5 C terminal like [PF09325.12, score=97.7]; PX domain [PF00787.26, score=52.0]; Protein of unknown function (DUF1180) [PF06679.14, score=26.3]} {Human: ENSG00000028528, SNX1, sorting nexin 1, [Score=203, Expect=6e-56]} {Mouse: ENSMUSG00000032382, Snx1, sorting nexin 1, [Score=200, Expect=5e-55]; ENSMUSG00000034484, Snx2, sorting nexin 2, [Score=190, Expect=2e-51]} {Dmel: FBgn0031534, Snx1, Sorting nexin 1, [Score=202, Expect=3e-56]} {Celegans: WBGene00004927, snx-1, Sorting NeXin, [Score=148, Expect=8e-38]} {Smed: dd_Smed_v6_835_0_1, dd_Smed_v6_835_0_1, [Score=187, Expect=2e-51]} {RNA1509_30430} {RNA1310_19962.1, RNA1509_30430} {RNA1509_30430, RNA815_7269}
4.	MligTC455_34376	3394	70.7	Mlig455_068724	Neo: Int S/G2/M Age: Down-Up-Up	PAM16	0.962	-	-	-	-	-	0.962	Mlig455_068724 {REF} {Length: 866} {TRANSSPLICED} {Pfam: Pam16 [PF03656.15, score=121.0]} {Human: ENSG00000217930, PAM16, presequence translocase associated motor 16, [RH, Score=98.2, Expect=2e-26]; ENSG00000282228, PAM16, presequence translocase associated motor 16, [RH, Score=98.2, Expect=2e-26]} {Mouse: ENSMUSG00000045886, Gm9803, predicted gene 9803, [RH, Score=100, Expect=1e-27]; ENSMUSG00000014301, Pam16, presequence translocase-asssociated motor 16 homolog (S. cerevisiae), [RH, Score=100, Expect=1e-27]} {Dmel: FBgn0038387, blp, black pearl, [RH, Score=114, Expect=4e-33]} {Celegans: WBGene00009734, F45G2.8, Mitochondrial import inner membrane translocase subunit tim-16, [RH, Score=106, Expect=4e-30]} {Smed: dd_Smed_v6_1720_0_1, dd_Smed_v6_1720_0_1, [RH, Score=110, Expect=7e-32]} {RNA1509_17135} {RNA1310_40855.1} {RNA815_19465}