Data search


search
Exact
Search

Results for MligTC455_44534

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_44534 236 4.92 Mlig455_013152

Neo: -

Age: -

Mlig455_013152 {REF} {Length: 2681} {RNA1509_38790} {RNA1310_35851} {RNA815_24666}

Cumulative graph for MligTC455_44534

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.923 2.904 0.17311 0.79867
RegionR2 1.856 2.904 0.08128 0.34936
RegionR3 0.291 2.904 0.73588 1.00000
RegionR4 0.714 2.904 0.49980 0.82663
RegionR5 1.13 2.904 0.20897 0.50429
RegionR6 1.127 2.904 0.25435 0.83961
RegionR7 0.454 2.904 0.68396 1.00000
RegionR8 0.351 2.904 0.75672 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.594 2.904 0.99993 1.00000
RegenerationR2 -1.156 2.904 0.10073 0.50199
RegenerationR3 1.245 2.904 0.11660 0.53260
RegenerationR4 0.789 2.904 0.29113 0.73486
RegenerationR5 1.405 2.904 0.04077 0.33259
RegenerationR6 0.816 2.904 0.27916 0.62824
RegenerationBL -0.291 2.904 0.79269 1.00000
RegenerationTP 2.106 2.904 0.02283 0.25651


Genes with expression patterns similar to MligTC455_44534

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_44534 236 4.92 Mlig455_013152

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_013152 {REF} {Length: 2681} {RNA1509_38790} {RNA1310_35851} {RNA815_24666}
2. MligTC455_44532 114 2.38 Mlig455_011871

Neo: -

Age: -

1.742 0.762 - - 0.980 - - Mlig455_011871 {REF} {Length: 1178} {TRANSSPLICED} {RNA1509_38790, RNA1509_59200} {RNA1310_25247, RNA1509_59200} {RNA1509_59200, RNA815_24666}
3. MligTC455_09512 345 7.19 Mlig455_034213

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.423

Region-enriched R5: 1.251/0.04175

0.962 - - - - 0.962 - Mlig455_034213 {REF} {Length: 1883} {RNA1509_53219} {RNA1310_44865.2} {RNA815_11275}
4. MligTC455_17734 1571 32.73 Mlig455_040745

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.279

Region-enriched R7: 1.462/0.00277

CRELD2 0.96 - - - - - 0.960 Mlig455_040745 {REF} {Length: 1452} {TRANSSPLICED} {Pfam: Calcium-binding EGF domain [PF07645.17, score=36.3]; Complement Clr-like EGF-like [PF12662.9, score=28.2]; TLR4 regulator and MIR-interacting MSAP [PF11938.10, score=21.4]; EGF domain [PF12947.9, score=20.8]; Human growth factor-like EGF [PF12661.9, score=19.2]} {Human: ENSG00000184164, CRELD2, cysteine rich with EGF like domains 2, [Score=163, Expect=3e-47]; ENSG00000163703, CRELD1, cysteine rich with EGF like domains 1, [Score=156, Expect=2e-43]} {Mouse: ENSMUSG00000030284, Creld1, cysteine-rich with EGF-like domains 1, [Score=156, Expect=6e-44]} {Dmel: FBgn0031217, CG11377, [Score=150, Expect=2e-42]} {Celegans: WBGene00008624, F09E8.2, [Score=158, Expect=8e-46]} {Smed: dd_Smed_v6_4289_0_1, dd_Smed_v6_4289_0_1, [Score=163, Expect=1e-46]} {RNA1509_8037} {RNA1310_21608, RNA1509_8037} {RNA1509_8037, RNA815_27005}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA