TomoSeq data search

Data search

Results for MligTC455_44553

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44553	337	7.01	Mlig455_035469	Neo: - Age: Down-Up-Up Region-enriched R3: 2.299/0.01129 Region-enriched R5: 1.707/0.04303		Mlig455_035469 {REF} {Length: 1909} {RNA1509_26749} {RNA1310_2698, RNA1509_26749} {RNA1509_26749, RNA815_16827}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_44553

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	1.924	3.359	0.15695	0.77576
RegionR2	-0.602	3.359	0.94905	1.00000
RegionR3	2.299	3.359	0.00030	0.01129
RegionR4	1.885	3.359	0.01459	0.08087
RegionR5	1.707	3.359	0.00668	0.04303
RegionR6	0.724	3.359	0.33163	0.91982
RegionR7	-0.785	3.359	0.96722	1.00000
RegionR8	-7.151	3.359	0.00200	0.07496

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.796	3.359	0.64230	1.00000
RegenerationR2	1.051	3.359	0.10735	0.51401
RegenerationR3	-1.09	3.359	0.06719	0.43625
RegenerationR4	-0.207	3.359	0.74746	0.96971
RegenerationR5	-0.131	3.359	0.82209	0.99492
RegenerationR6	0.803	3.359	0.21121	0.55446
RegenerationBL	1.082	3.359	0.50563	0.86933
RegenerationTP	2.678	3.359	0.18745	0.62478

Genes with expression patterns similar to MligTC455_44553

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44553	337	7.01	Mlig455_035469	Neo: - Age: Down-Up-Up Region-enriched R3: 2.299/0.01129 Region-enriched R5: 1.707/0.04303		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_035469 {REF} {Length: 1909} {RNA1509_26749} {RNA1310_2698, RNA1509_26749} {RNA1509_26749, RNA815_16827}
2.	MligTC455_18818	447	9.3	Mlig455_034930	Neo: - Age: logFC(26M/2M)=-0.428	SMIM7	1.685	-	-	-	0.734	-	0.951	Mlig455_034930 {REF} {Length: 711} {Human: ENSG00000214046, SMIM7, small integral membrane protein 7, [RH, Score=74.3, Expect=5e-19]; ENSG00000268790, AC008764.4, novel protein, [RH, Score=70.9, Expect=1e-17]} {Mouse: ENSMUSG00000044600, Smim7, small integral membrane protein 7, [RH, Score=76.3, Expect=8e-20]} {Celegans: WBGene00021784, cogc-4, Conserved oligomeric Golgi complex subunit 4, [Score=73.6, Expect=5e-19]} {RNA1509_46415} {RNA1310_50894, RNA1509_46415} {RNA1509_46415, RNA815_26510.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_44553

337

7.01

Mlig455_035469

Neo: -

Age: Down-Up-Up

Region-enriched R3: 2.299/0.01129
Region-enriched R5: 1.707/0.04303

1.000

Mlig455_035469 {REF} {Length: 1909} {RNA1509_26749} {RNA1310_2698, RNA1509_26749} {RNA1509_26749, RNA815_16827}

MligTC455_18818

447

9.3

Mlig455_034930

Neo: -

Age: logFC(26M/2M)=-0.428

SMIM7

1.685

0.734

0.951

Mlig455_034930 {REF} {Length: 711} {Human: ENSG00000214046, SMIM7, small integral membrane protein 7, [RH, Score=74.3, Expect=5e-19]; ENSG00000268790, AC008764.4, novel protein, [RH, Score=70.9, Expect=1e-17]} {Mouse: ENSMUSG00000044600, Smim7, small integral membrane protein 7, [RH, Score=76.3, Expect=8e-20]} {Celegans: WBGene00021784, cogc-4, Conserved oligomeric Golgi complex subunit 4, [Score=73.6, Expect=5e-19]} {RNA1509_46415} {RNA1310_50894, RNA1509_46415} {RNA1509_46415, RNA815_26510.1}