TomoSeq data search

Data search

Results for MligTC455_44565

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44565	3985	83.02	Mlig455_047168, Mlig455_048514	Neo: - Age: logFC(26M/2M)=0.408	RAC2	Mlig455_047168 {REF} {Length: 1065} {Pfam: Ras family [PF00071.24, score=185.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=82.4]; ADP-ribosylation factor family [PF00025.23, score=28.3]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=320, Expect=1e-112]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=313, Expect=4e-110]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=305, Expect=9e-107]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=317, Expect=1e-111]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=313, Expect=3e-110]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=305, Expect=6e-107]} {Dmel: FBgn0010333, Rac1, [Score=307, Expect=6e-108]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=310, Expect=3e-109]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=298, Expect=2e-104]} {RNA1509_15524, RNA1509_17328} {RNA1310_16647.1, RNA1509_15524} {RNA1509_15524, RNA815_7231.1} Mlig455_048514 {REF} {Length: 1120} {Pfam: Ras family [PF00071.24, score=185.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=82.4]; ADP-ribosylation factor family [PF00025.23, score=28.3]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=320, Expect=1e-112]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=313, Expect=4e-110]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=305, Expect=9e-107]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=317, Expect=1e-111]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=313, Expect=3e-110]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=305, Expect=6e-107]} {Dmel: FBgn0010333, Rac1, [Score=307, Expect=6e-108]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=310, Expect=3e-109]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=298, Expect=2e-104]} {RNA1509_17328} {RNA1310_16647.1, RNA1509_17328} {RNA1509_17328, RNA815_7231.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44565

3985

83.02

Mlig455_047168, Mlig455_048514

Neo: -

Age: logFC(26M/2M)=0.408

RAC2

Mlig455_047168 {REF} {Length: 1065} {Pfam: Ras family [PF00071.24, score=185.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=82.4]; ADP-ribosylation factor family [PF00025.23, score=28.3]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=320, Expect=1e-112]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=313, Expect=4e-110]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=305, Expect=9e-107]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=317, Expect=1e-111]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=313, Expect=3e-110]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=305, Expect=6e-107]} {Dmel: FBgn0010333, Rac1, [Score=307, Expect=6e-108]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=310, Expect=3e-109]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=298, Expect=2e-104]} {RNA1509_15524, RNA1509_17328} {RNA1310_16647.1, RNA1509_15524} {RNA1509_15524, RNA815_7231.1}

Mlig455_048514 {REF} {Length: 1120} {Pfam: Ras family [PF00071.24, score=185.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=82.4]; ADP-ribosylation factor family [PF00025.23, score=28.3]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=320, Expect=1e-112]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=313, Expect=4e-110]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=305, Expect=9e-107]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=317, Expect=1e-111]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=313, Expect=3e-110]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=305, Expect=6e-107]} {Dmel: FBgn0010333, Rac1, [Score=307, Expect=6e-108]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=310, Expect=3e-109]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=298, Expect=2e-104]} {RNA1509_17328} {RNA1310_16647.1, RNA1509_17328} {RNA1509_17328, RNA815_7231.1}

Cumulative graph for MligTC455_44565

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.724	6.417	0.00081	0.09554
RegionR2	0.464	6.417	0.24533	0.62200
RegionR3	0.874	6.417	0.00933	0.14642
RegionR4	0.895	6.417	0.03216	0.14280
RegionR5	0.211	6.417	0.55125	0.91251
RegionR6	0.59	6.417	0.09152	0.55599
RegionR7	0.366	6.417	0.32147	0.95700
RegionR8	-0.676	6.417	0.14460	0.69355

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.834	6.417	0.41741	1.00000
RegenerationR2	0.17	6.417	0.67515	0.94728
RegenerationR3	0.545	6.417	0.19528	0.63066
RegenerationR4	0.945	6.417	0.03502	0.30206
RegenerationR5	0.857	6.417	0.04186	0.33576
RegenerationR6	0.691	6.417	0.10377	0.39914
RegenerationBL	0.255	6.417	0.50914	0.87286
RegenerationTP	1.255	6.417	0.00203	0.07287

Genes with expression patterns similar to MligTC455_44565

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44565	3985	83.02	Mlig455_047168, Mlig455_048514	Neo: - Age: logFC(26M/2M)=0.408	RAC2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_047168 {REF} {Length: 1065} {Pfam: Ras family [PF00071.24, score=185.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=82.4]; ADP-ribosylation factor family [PF00025.23, score=28.3]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=320, Expect=1e-112]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=313, Expect=4e-110]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=305, Expect=9e-107]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=317, Expect=1e-111]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=313, Expect=3e-110]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=305, Expect=6e-107]} {Dmel: FBgn0010333, Rac1, [Score=307, Expect=6e-108]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=310, Expect=3e-109]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=298, Expect=2e-104]} {RNA1509_15524, RNA1509_17328} {RNA1310_16647.1, RNA1509_15524} {RNA1509_15524, RNA815_7231.1} Mlig455_048514 {REF} {Length: 1120} {Pfam: Ras family [PF00071.24, score=185.6]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=82.4]; ADP-ribosylation factor family [PF00025.23, score=28.3]} {Human: ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=320, Expect=1e-112]; ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=313, Expect=4e-110]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=305, Expect=9e-107]} {Mouse: ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=317, Expect=1e-111]; ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=313, Expect=3e-110]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=305, Expect=6e-107]} {Dmel: FBgn0010333, Rac1, [Score=307, Expect=6e-108]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=310, Expect=3e-109]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=298, Expect=2e-104]} {RNA1509_17328} {RNA1310_16647.1, RNA1509_17328} {RNA1509_17328, RNA815_7231.1}
2.	MligTC455_45195	9516	198.25	Mlig455_020734, Mlig455_020806	Neo: - Age: logFC(26M/2M)=0.328 Regeneration-downregulated BL: -1.150 Regeneration-depleted BL: -1.150	TAX1BP1	0.974	-	-	-	-	0.974	-	Mlig455_020734 {REF} {Length: 2997} {TRANSSPLICED} {Pfam: SKICH domain [PF17751.3, score=40.3]; Crescentin protein [PF19220.2, score=21.6]} {Human: ENSG00000106052, TAX1BP1, Tax1 binding protein 1, [RH, Score=85.5, Expect=8e-17]} {Mouse: ENSMUSG00000004535, Tax1bp1, Tax1 (human T cell leukemia virus type I) binding protein 1, [Score=79.3, Expect=5e-15]} {RNA1509_27147} {RNA1310_19827} {RNA815_2045} Mlig455_020806 {REF} {Length: 3001} {TRANSSPLICED} {Pfam: SKICH domain [PF17751.3, score=40.8]; Crescentin protein [PF19220.2, score=22.3]} {Human: ENSG00000106052, TAX1BP1, Tax1 binding protein 1, [RH, Score=87.0, Expect=3e-17]} {Mouse: ENSMUSG00000004535, Tax1bp1, Tax1 (human T cell leukemia virus type I) binding protein 1, [RH, Score=80.5, Expect=2e-15]} {RNA1509_33506, RNA1509_6331} {RNA1310_19827, RNA1509_33506} {RNA1509_33506, RNA815_2045}
3.	MligTC455_46482	1477	30.77	Mlig455_029196	Neo: - Age: - Region-enriched R2: 1.080/0.01471	PLSCR1	0.957	-	-	-	-	0.957	-	Mlig455_029196 {REF} {Length: 1363} {Pfam: Scramblase [PF03803.17, score=27.8]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=42.0, Expect=9e-06]} {Mouse: ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=42.7, Expect=3e-06]; ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=41.2, Expect=1e-05]} {Dmel: FBgn0052056, scramb1, scramblase 1, [Score=44.3, Expect=7e-07]} {RNA1509_6872} {RNA1310_19869.1} {RNA815_8634}
4.	MligTC455_19369	174	3.62	Mlig455_027643	Neo: - Age: -		0.956	-	-	-	-	0.956	-	Mlig455_027643 {REF} {Length: 677} {RNA1509_8759} {RNA1310_60559} {RNA815_28038}
5.	MligTC455_30272	339	7.06	Mlig455_003363, Mlig455_042254, Mlig455_062169	Neo: - Age: Up-Up-Down		0.95	-	-	-	-	0.950	-	Mlig455_003363 {REF} {Length: 1628} {Celegans: WBGene00016348, C33E10.6, [RH, Score=272, Expect=9e-81]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=253, Expect=6e-77]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_042254 {REF} {Length: 322} {Celegans: WBGene00022511, ZC53.4, [Score=69.3, Expect=5e-15]} {RNA1509_5039} {RNA1310_3396.1} {RNA815_1342.1} Mlig455_062169 {REF} {Length: 1903} {Pfam: Recombination endonuclease VII [PF02945.17, score=32.1]} {Celegans: WBGene00022511, ZC53.4, [RH, Score=281, Expect=5e-83]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=262, Expect=1e-79]} {RNA1509_19771, RNA1509_5039} {RNA1310_3396.1, RNA1509_19771} {RNA1509_19771, RNA815_1342.1}