TomoSeq data search

Data search

Results for MligTC455_44667

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_44667	1147	23.89	Mlig455_010930, Mlig455_033155	Neo: - Age: - Region-enriched R5: 1.015/0.00135	LYRM1	Mlig455_010930 {REF} {Length: 1417} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=48.0]; Complex1_LYR-like [PF13233.8, score=23.1]} {Human: ENSG00000102897, LYRM1, LYR motif containing 1, [RH, Score=88.6, Expect=3e-23]} {Mouse: ENSMUSG00000030922, Lyrm1, LYR motif containing 1, [RH, Score=91.7, Expect=1e-24]} {Celegans: WBGene00011144, R08D7.4, [RH, Score=66.6, Expect=5e-15]} {Smed: dd_Smed_v6_5018_0_1, dd_Smed_v6_5018_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_15839} {RNA1310_15223.1, RNA1509_15839} {RNA1509_15839, RNA815_18111} Mlig455_033155 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=48.0]; Complex1_LYR-like [PF13233.8, score=23.1]} {Human: ENSG00000102897, LYRM1, LYR motif containing 1, [RH, Score=88.6, Expect=3e-23]} {Mouse: ENSMUSG00000030922, Lyrm1, LYR motif containing 1, [RH, Score=91.7, Expect=1e-24]} {Celegans: WBGene00011144, R08D7.4, [RH, Score=66.6, Expect=5e-15]} {Smed: dd_Smed_v6_5018_0_1, dd_Smed_v6_5018_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_15839} {RNA1310_15223.1} {RNA815_18111}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_44667

1147

23.89

Mlig455_010930, Mlig455_033155

Neo: -

Age: -

Region-enriched R5: 1.015/0.00135

LYRM1

Mlig455_010930 {REF} {Length: 1417} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=48.0]; Complex1_LYR-like [PF13233.8, score=23.1]} {Human: ENSG00000102897, LYRM1, LYR motif containing 1, [RH, Score=88.6, Expect=3e-23]} {Mouse: ENSMUSG00000030922, Lyrm1, LYR motif containing 1, [RH, Score=91.7, Expect=1e-24]} {Celegans: WBGene00011144, R08D7.4, [RH, Score=66.6, Expect=5e-15]} {Smed: dd_Smed_v6_5018_0_1, dd_Smed_v6_5018_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_15839} {RNA1310_15223.1, RNA1509_15839} {RNA1509_15839, RNA815_18111}

Mlig455_033155 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=48.0]; Complex1_LYR-like [PF13233.8, score=23.1]} {Human: ENSG00000102897, LYRM1, LYR motif containing 1, [RH, Score=88.6, Expect=3e-23]} {Mouse: ENSMUSG00000030922, Lyrm1, LYR motif containing 1, [RH, Score=91.7, Expect=1e-24]} {Celegans: WBGene00011144, R08D7.4, [RH, Score=66.6, Expect=5e-15]} {Smed: dd_Smed_v6_5018_0_1, dd_Smed_v6_5018_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_15839} {RNA1310_15223.1} {RNA815_18111}

Cumulative graph for MligTC455_44667

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.554	4.853	0.50867	1.00000
RegionR2	0.218	4.853	0.55550	0.91934
RegionR3	-0.077	4.853	0.79886	1.00000
RegionR4	0.325	4.853	0.33948	0.65921
RegionR5	1.015	4.853	0.00008	0.00135
RegionR6	0.117	4.853	0.69917	1.00000
RegionR7	0.028	4.853	0.93811	1.00000
RegionR8	-1.072	4.853	0.04359	0.40929

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-7.578	4.853	0.03738	0.65473
RegenerationR2	-0.521	4.853	0.10191	0.50318
RegenerationR3	-0.561	4.853	0.11180	0.52493
RegenerationR4	-0.493	4.853	0.15110	0.57937
RegenerationR5	-0.837	4.853	0.00796	0.16194
RegenerationR6	-0.604	4.853	0.08842	0.37129
RegenerationBL	0.055	4.853	0.89723	1.00000
RegenerationTP	-0.259	4.853	0.59708	0.95918

Genes with expression patterns similar to MligTC455_44667

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_44667	1147	23.89	Mlig455_010930, Mlig455_033155	Neo: - Age: - Region-enriched R5: 1.015/0.00135	LYRM1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010930 {REF} {Length: 1417} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=48.0]; Complex1_LYR-like [PF13233.8, score=23.1]} {Human: ENSG00000102897, LYRM1, LYR motif containing 1, [RH, Score=88.6, Expect=3e-23]} {Mouse: ENSMUSG00000030922, Lyrm1, LYR motif containing 1, [RH, Score=91.7, Expect=1e-24]} {Celegans: WBGene00011144, R08D7.4, [RH, Score=66.6, Expect=5e-15]} {Smed: dd_Smed_v6_5018_0_1, dd_Smed_v6_5018_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_15839} {RNA1310_15223.1, RNA1509_15839} {RNA1509_15839, RNA815_18111} Mlig455_033155 {REF} {Length: 1517} {TRANSSPLICED} {Pfam: Complex 1 protein (LYR family) [PF05347.17, score=48.0]; Complex1_LYR-like [PF13233.8, score=23.1]} {Human: ENSG00000102897, LYRM1, LYR motif containing 1, [RH, Score=88.6, Expect=3e-23]} {Mouse: ENSMUSG00000030922, Lyrm1, LYR motif containing 1, [RH, Score=91.7, Expect=1e-24]} {Celegans: WBGene00011144, R08D7.4, [RH, Score=66.6, Expect=5e-15]} {Smed: dd_Smed_v6_5018_0_1, dd_Smed_v6_5018_0_1, [RH, Score=98.6, Expect=1e-27]} {RNA1509_15839} {RNA1310_15223.1} {RNA815_18111}
2.	MligTC455_40837	356	7.42	Mlig455_046106, Mlig455_070525	Neo: - Age: -	HS2ST1	1.785	0.813	-	-	-	0.972	-	Mlig455_046106 {REF} {Length: 4309} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=109.5]; Galactose-3-O-sulfotransferase [PF06990.13, score=21.4]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=347, Expect=2e-117]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [RH, Score=345, Expect=7e-117]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [RH, Score=332, Expect=7e-112]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [RH, Score=257, Expect=2e-83]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [RH, Score=293, Expect=3e-97]} {RNA1509_17362} {RNA1310_14267.2} {RNA815_6989.1} Mlig455_070525 {REF} {Length: 3442} {TRANSSPLICED} {Pfam: Sulfotransferase family [PF03567.16, score=81.4]} {Human: ENSG00000153936, HS2ST1, heparan sulfate 2-O-sulfotransferase 1, [Score=317, Expect=3e-107]} {Mouse: ENSMUSG00000040151, Hs2st1, heparan sulfate 2-O-sulfotransferase 1, [Score=315, Expect=2e-106]} {Dmel: FBgn0024230, Hs2st, Heparan sulfate 2-O-sulfotransferase, [Score=300, Expect=7e-101]} {Celegans: WBGene00002029, hst-2, Heparan sulfate 2-O-sulfotransferase hst-2, [Score=232, Expect=1e-74]} {Smed: dd_Smed_v6_6699_0_1, dd_Smed_v6_6699_0_1, [Score=269, Expect=3e-89]} {RNA1509_17362, RNA1509_55740} {RNA1310_14267.1, RNA1509_17362, RNA1509_55740} {RNA1509_17362, RNA1509_55740, RNA815_6989.1}
3.	MligTC455_28391	197	4.1	Mlig455_041238	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_041238 {REF} {Length: 2639} {TRANSSPLICED} {RNA1509_35221} {RNA1310_41838} {RNA815_24207}
4.	MligTC455_29658	1939	40.4	Mlig455_013534	Neo: - Age: - Region-enriched R5: 1.066/0.00003	UGP2	0.957	-	-	-	0.957	-	-	Mlig455_013534 {REF} {Length: 2368} {TRANSSPLICED} {Pfam: UTP--glucose-1-phosphate uridylyltransferase [PF01704.20, score=614.7]} {Human: ENSG00000169764, UGP2, UDP-glucose pyrophosphorylase 2, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000001891, Ugp2, UDP-glucose pyrophosphorylase 2, [RH, Score=634, Expect=0.0]} {Dmel: FBgn0035978, UGP, [RH, Score=622, Expect=0.0]} {Celegans: WBGene00010665, K08E3.5, [RH, Score=621, Expect=0.0]} {Smed: dd_Smed_v6_3057_0_1, dd_Smed_v6_3057_0_1, [RH, Score=621, Expect=0.0]} {RNA1509_1617} {RNA1310_6161.1, RNA1509_1617} {RNA1509_1617, RNA815_2096.1}